| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is pykA [H]
Identifier: 126174459
GI number: 126174459
Start: 2593890
End: 2595329
Strand: Direct
Name: pykA [H]
Synonym: Sbal_2243
Alternate gene names: 126174459
Gene position: 2593890-2595329 (Clockwise)
Preceding gene: 126174458
Following gene: 126174462
Centisome position: 50.59
GC content: 48.75
Gene sequence:
>1440_bases ATGTTCCGCAGAACCAAAATCGTCACCACTCTAGGTCCCGCTACCGATCGTGATGATAATCTACGCCGCATCATCGCGGC AGGTGCAAACGTTGTACGTCTTAATTTCTCCCACGGTTCCCCAGAAGATCACTTAAAACGAGCCACTCAAGCGCGCGAAA TCGCTAAAGAGTTGGGCGTTCATGTGGCTATTCTGGGTGACTTACAAGGCCCTAAAATCCGCGTTTCTACTTTCAAAGAC AATAAGAAAGTGCAACTGGTGTTAGGTCAAGCCTACGTGCTTGATGCCGAGTTAGCAAAAGGAGAAGGCGACGAGACCCA AGTGGGTATCGACTACAAGCAATTGCCTGACGATGTGACTGTTGGCGATATCTTGATGTTAGATGATGGCCGTGTTCAAT TACGCGTTGAGCGTGTTGAAGGCCGTAAAGTGCACACCACAGTGACTGTGGCTGGCCCTTTATCTAACAACAAAGGTATT AACAAGCAAGGCGGCGGACTTTCTGCTGCGGCGCTGACCGAAAAAGACAAAGCTGACATTCTGACTGCGGCATTGATCCA AGTGGATTATTTAGCCGTGTCTTTCCCGCGCAGTGGTGCTGATTTAGATTACGCCCGTGATCTTGCACGTCAAGCTGGTT GTAATGCCTTGATCGTGGCTAAAGTTGAACGCGCTGAAGCCGTTGCGACCGATGCGGCTATGGATGATGTGATCTTAGCA TCTGACGTTGTCATGGTTGCCCGTGGTGACTTAGGTGTTGAAATTGGTGATGCTGCGCTCGTTGCGGTGCAGAAGAAGTT AATCGCCCGTTCACGCCAACTGAACAAAGTCGTCATCACGGCCACTCAGATGATGGAATCGATGATTTCAAGCCCTATGC CAACCCGCGCCGAAGTAATGGACGTGGCAAACGCTGTGCTTGATGGTACCGATGCAGTGATGTTATCAGCTGAAACCGCT GCCGGTGACTTCCCAGAAGAAACCGTTAAGGCAATGGCAAACGTCTGTGTTGGCGCAGAATCTCACCCAAGTGTGATTGT GTCTAAGCATAGATTAGATGTGCGTTTCACTTCAGTTGAAGAAACGATTGCACTATCGACTATGTATGCGGCTAACCATC TTGAAGGCGTTAAGGCGATTATTGCTTTGACTGAATCAGGTGCGACACCACAATTAATGTCACGCATCAGTTCTGCACTG CCGATCTTAGGTTTATCACGTCACGCAACAACCCTAGCCAAAATGGCCTTGTACCGCGGCGTGTTACCAATCTACTTCGA TTCAACTATCCACCCAGCTGATGAGCTAGCGCAAAAAGCGTTAGAAGCATTAACAGCTGCAGGTTATTTGAATAGTGGTG ATATGGTGCTGATGACCAAAGGCGATGCAATGGAAACGATTGGCGGCACTAACACCTGTAAAGTGTTGATCGTAGCTTAA
Upstream 100 bases:
>100_bases TACATAACTTTAGATCAATTTGATTGTAACTTTACTACATAATCTGGAATTGCATGGTAATATAGGCCCAAGATTTTTTT AACTTTAACGGAGTATCCTT
Downstream 100 bases:
>100_bases GTTGCTTAAGCTTCTTCTAACGACTAAAGCGCGTTAGAAAAAGCCAATAAAAAACCACCTCATGAAGGTGGTTTTTTATA TCTGCAGTTCTCTGTAAATG
Product: pyruvate kinase
Products: NA
Alternate protein names: PK-2 [H]
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MFRRTKIVTTLGPATDRDDNLRRIIAAGANVVRLNFSHGSPEDHLKRATQAREIAKELGVHVAILGDLQGPKIRVSTFKD NKKVQLVLGQAYVLDAELAKGEGDETQVGIDYKQLPDDVTVGDILMLDDGRVQLRVERVEGRKVHTTVTVAGPLSNNKGI NKQGGGLSAAALTEKDKADILTAALIQVDYLAVSFPRSGADLDYARDLARQAGCNALIVAKVERAEAVATDAAMDDVILA SDVVMVARGDLGVEIGDAALVAVQKKLIARSRQLNKVVITATQMMESMISSPMPTRAEVMDVANAVLDGTDAVMLSAETA AGDFPEETVKAMANVCVGAESHPSVIVSKHRLDVRFTSVEETIALSTMYAANHLEGVKAIIALTESGATPQLMSRISSAL PILGLSRHATTLAKMALYRGVLPIYFDSTIHPADELAQKALEALTAAGYLNSGDMVLMTKGDAMETIGGTNTCKVLIVA
Sequences:
>Translated_479_residues MFRRTKIVTTLGPATDRDDNLRRIIAAGANVVRLNFSHGSPEDHLKRATQAREIAKELGVHVAILGDLQGPKIRVSTFKD NKKVQLVLGQAYVLDAELAKGEGDETQVGIDYKQLPDDVTVGDILMLDDGRVQLRVERVEGRKVHTTVTVAGPLSNNKGI NKQGGGLSAAALTEKDKADILTAALIQVDYLAVSFPRSGADLDYARDLARQAGCNALIVAKVERAEAVATDAAMDDVILA SDVVMVARGDLGVEIGDAALVAVQKKLIARSRQLNKVVITATQMMESMISSPMPTRAEVMDVANAVLDGTDAVMLSAETA AGDFPEETVKAMANVCVGAESHPSVIVSKHRLDVRFTSVEETIALSTMYAANHLEGVKAIIALTESGATPQLMSRISSAL PILGLSRHATTLAKMALYRGVLPIYFDSTIHPADELAQKALEALTAAGYLNSGDMVLMTKGDAMETIGGTNTCKVLIVA >Mature_479_residues MFRRTKIVTTLGPATDRDDNLRRIIAAGANVVRLNFSHGSPEDHLKRATQAREIAKELGVHVAILGDLQGPKIRVSTFKD NKKVQLVLGQAYVLDAELAKGEGDETQVGIDYKQLPDDVTVGDILMLDDGRVQLRVERVEGRKVHTTVTVAGPLSNNKGI NKQGGGLSAAALTEKDKADILTAALIQVDYLAVSFPRSGADLDYARDLARQAGCNALIVAKVERAEAVATDAAMDDVILA SDVVMVARGDLGVEIGDAALVAVQKKLIARSRQLNKVVITATQMMESMISSPMPTRAEVMDVANAVLDGTDAVMLSAETA AGDFPEETVKAMANVCVGAESHPSVIVSKHRLDVRFTSVEETIALSTMYAANHLEGVKAIIALTESGATPQLMSRISSAL PILGLSRHATTLAKMALYRGVLPIYFDSTIHPADELAQKALEALTAAGYLNSGDMVLMTKGDAMETIGGTNTCKVLIVA
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=493, Percent_Identity=34.6855983772819, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI33286420, Length=493, Percent_Identity=34.6855983772819, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI33286418, Length=493, Percent_Identity=34.6855983772819, Blast_Score=246, Evalue=3e-65, Organism=Homo sapiens, GI10835121, Length=494, Percent_Identity=34.2105263157895, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI32967597, Length=494, Percent_Identity=34.2105263157895, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI310128732, Length=289, Percent_Identity=33.9100346020761, Blast_Score=145, Evalue=8e-35, Organism=Homo sapiens, GI310128730, Length=289, Percent_Identity=33.9100346020761, Blast_Score=145, Evalue=8e-35, Organism=Homo sapiens, GI310128736, Length=235, Percent_Identity=31.9148936170213, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI310128734, Length=235, Percent_Identity=31.9148936170213, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI310128738, Length=214, Percent_Identity=31.3084112149533, Blast_Score=92, Evalue=8e-19, Organism=Escherichia coli, GI1788160, Length=477, Percent_Identity=71.6981132075472, Blast_Score=671, Evalue=0.0, Organism=Escherichia coli, GI1787965, Length=480, Percent_Identity=36.25, Blast_Score=272, Evalue=4e-74, Organism=Caenorhabditis elegans, GI17544584, Length=487, Percent_Identity=36.5503080082135, Blast_Score=273, Evalue=1e-73, Organism=Caenorhabditis elegans, GI71984413, Length=496, Percent_Identity=33.4677419354839, Blast_Score=221, Evalue=6e-58, Organism=Caenorhabditis elegans, GI17506831, Length=496, Percent_Identity=33.4677419354839, Blast_Score=221, Evalue=6e-58, Organism=Caenorhabditis elegans, GI71984406, Length=496, Percent_Identity=33.4677419354839, Blast_Score=221, Evalue=7e-58, Organism=Caenorhabditis elegans, GI17506829, Length=496, Percent_Identity=33.4677419354839, Blast_Score=221, Evalue=7e-58, Organism=Saccharomyces cerevisiae, GI6319279, Length=477, Percent_Identity=35.8490566037736, Blast_Score=248, Evalue=2e-66, Organism=Saccharomyces cerevisiae, GI6324923, Length=489, Percent_Identity=32.1063394683027, Blast_Score=214, Evalue=2e-56, Organism=Drosophila melanogaster, GI24648964, Length=507, Percent_Identity=33.9250493096647, Blast_Score=245, Evalue=4e-65, Organism=Drosophila melanogaster, GI28571814, Length=507, Percent_Identity=33.9250493096647, Blast_Score=245, Evalue=5e-65, Organism=Drosophila melanogaster, GI24648966, Length=418, Percent_Identity=34.9282296650718, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI24581235, Length=494, Percent_Identity=30.1619433198381, Blast_Score=188, Evalue=7e-48, Organism=Drosophila melanogaster, GI24646914, Length=277, Percent_Identity=35.7400722021661, Blast_Score=151, Evalue=8e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 50904; Mature: 50904
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRRTKIVTTLGPATDRDDNLRRIIAAGANVVRLNFSHGSPEDHLKRATQAREIAKELGV CCCCEEEEEEECCCCCCCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCC HVAILGDLQGPKIRVSTFKDNKKVQLVLGQAYVLDAELAKGEGDETQVGIDYKQLPDDVT EEEEEECCCCCEEEEEEECCCCEEEEEECCEEEEECHHHCCCCCCEEECCCHHHCCCCCC VGDILMLDDGRVQLRVERVEGRKVHTTVTVAGPLSNNKGINKQGGGLSAAALTEKDKADI CCEEEEEECCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHH LTAALIQVDYLAVSFPRSGADLDYARDLARQAGCNALIVAKVERAEAVATDAAMDDVILA HHHHHHHHEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHCCCHHH SDVVMVARGDLGVEIGDAALVAVQKKLIARSRQLNKVVITATQMMESMISSPMPTRAEVM CCEEEEEECCCCEEECCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCHHHHH DVANAVLDGTDAVMLSAETAAGDFPEETVKAMANVCVGAESHPSVIVSKHRLDVRFTSVE HHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECHH ETIALSTMYAANHLEGVKAIIALTESGATPQLMSRISSALPILGLSRHATTLAKMALYRG HHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHCCCCEECCHHHHHHHHHHHHHC VLPIYFDSTIHPADELAQKALEALTAAGYLNSGDMVLMTKGDAMETIGGTNTCKVLIVA CCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHCCCCCCEEEEEEC >Mature Secondary Structure MFRRTKIVTTLGPATDRDDNLRRIIAAGANVVRLNFSHGSPEDHLKRATQAREIAKELGV CCCCEEEEEEECCCCCCCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCC HVAILGDLQGPKIRVSTFKDNKKVQLVLGQAYVLDAELAKGEGDETQVGIDYKQLPDDVT EEEEEECCCCCEEEEEEECCCCEEEEEECCEEEEECHHHCCCCCCEEECCCHHHCCCCCC VGDILMLDDGRVQLRVERVEGRKVHTTVTVAGPLSNNKGINKQGGGLSAAALTEKDKADI CCEEEEEECCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHH LTAALIQVDYLAVSFPRSGADLDYARDLARQAGCNALIVAKVERAEAVATDAAMDDVILA HHHHHHHHEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHCCCHHH SDVVMVARGDLGVEIGDAALVAVQKKLIARSRQLNKVVITATQMMESMISSPMPTRAEVM CCEEEEEECCCCEEECCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCHHHHH DVANAVLDGTDAVMLSAETAAGDFPEETVKAMANVCVGAESHPSVIVSKHRLDVRFTSVE HHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECHH ETIALSTMYAANHLEGVKAIIALTESGATPQLMSRISSALPILGLSRHATTLAKMALYRG HHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHCCCCEECCHHHHHHHHHHHHHC VLPIYFDSTIHPADELAQKALEALTAAGYLNSGDMVLMTKGDAMETIGGTNTCKVLIVA CCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 1732206; 1859631; 8439398 [H]