| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174340
Identifier: 126174340
GI number: 126174340
Start: 2462149
End: 2463045
Strand: Direct
Name: 126174340
Synonym: Sbal_2121
Alternate gene names: NA
Gene position: 2462149-2463045 (Clockwise)
Preceding gene: 126174339
Following gene: 126174342
Centisome position: 48.02
GC content: 41.92
Gene sequence:
>897_bases ATGACAGAGTTACTAAAAGGGATTTTTTCAGTTTCACTTATTTTGTTGGGTATGGGAGCGATTTTAGTCCCTATGTTTTT TGTTATACGACATCGAGACAGAACGGTAAAGCTTCCTATTGATAGGGAAAAGTTGAACAGATTGCCTGGTTTTGGCATTC AAAAACAGATCCAAGAGCTGCAATTTGATATTTTGAGCGCAATGCTCATGTCGGTCATCGTTGTCACCATTCCGTTTGCA TTTGAAGGATTAAGGGGATACCTCGACAAAGGTACATTTCCTTTGGCATTTATTGGATTCATTGTACTCGGCCCAATTTA TTTTGTGGTCAAAACCTATCGTAGTATGACTCGATTGACTAAATTACGTTTGGGGCATACGGCCGAATTAGCGACCGCAG CCGAACTAATGCGTTTGCAGGGATTGGGTTATCAAGTTTTCCATGATATTCAAGCCGATGGTTTTAACATTGATCACTTA GTCGTGGGGATTAATGGTGTGTTTGCCATTGAAACTAAGGGGCGGCATAAGTGGTACAGTGATAAGAAGAATGAGTCAAA TGGTGGGCAACATAAGGCACATGAGTTGTTTTACCGTGATGGGAAATTGGTGTTTCCATCTTGGACAGAAACGGCACCGA TTGAACAAGCTCAACGTCAAGCTAAGTGGGTGAGTGAATGGCTCACAAAGGCTGTAGGCCAATCTATTCCGGTAATGCCT GTACTCGTATTTCCCGGGTGGATGGTGAAGTCACAAACTAAACCACCGTTTCCTATCATTAATCATAAGCAAGTCGCTAT TACACTTCCTAAGATGAATGCCGCTATATTCACTCAAGAGCAAGTGAATGCGATTGCTTATCAAATTATGCAACGTTGTT TGCAGGGCAAGCCATAA
Upstream 100 bases:
>100_bases ATAGATAATGATTTATCGAGCACAGCAATTTAGAAACAAAGAAGTAAGTAGCGTTTATTCAGTCTCAGAATCTTAATTAT CTAATTTTTAAAGGAAAGGT
Downstream 100 bases:
>100_bases CTCTCTTCAGATTTTTAAATCATTATTTAGCCCAATAAAAAAGTCGTCACTGGATAACCAATGACGACTTTTTAATGCGA TAACGCTGGGTTAATCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NERD Domain Protein
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MTELLKGIFSVSLILLGMGAILVPMFFVIRHRDRTVKLPIDREKLNRLPGFGIQKQIQELQFDILSAMLMSVIVVTIPFA FEGLRGYLDKGTFPLAFIGFIVLGPIYFVVKTYRSMTRLTKLRLGHTAELATAAELMRLQGLGYQVFHDIQADGFNIDHL VVGINGVFAIETKGRHKWYSDKKNESNGGQHKAHELFYRDGKLVFPSWTETAPIEQAQRQAKWVSEWLTKAVGQSIPVMP VLVFPGWMVKSQTKPPFPIINHKQVAITLPKMNAAIFTQEQVNAIAYQIMQRCLQGKP
Sequences:
>Translated_298_residues MTELLKGIFSVSLILLGMGAILVPMFFVIRHRDRTVKLPIDREKLNRLPGFGIQKQIQELQFDILSAMLMSVIVVTIPFA FEGLRGYLDKGTFPLAFIGFIVLGPIYFVVKTYRSMTRLTKLRLGHTAELATAAELMRLQGLGYQVFHDIQADGFNIDHL VVGINGVFAIETKGRHKWYSDKKNESNGGQHKAHELFYRDGKLVFPSWTETAPIEQAQRQAKWVSEWLTKAVGQSIPVMP VLVFPGWMVKSQTKPPFPIINHKQVAITLPKMNAAIFTQEQVNAIAYQIMQRCLQGKP >Mature_297_residues TELLKGIFSVSLILLGMGAILVPMFFVIRHRDRTVKLPIDREKLNRLPGFGIQKQIQELQFDILSAMLMSVIVVTIPFAF EGLRGYLDKGTFPLAFIGFIVLGPIYFVVKTYRSMTRLTKLRLGHTAELATAAELMRLQGLGYQVFHDIQADGFNIDHLV VGINGVFAIETKGRHKWYSDKKNESNGGQHKAHELFYRDGKLVFPSWTETAPIEQAQRQAKWVSEWLTKAVGQSIPVMPV LVFPGWMVKSQTKPPFPIINHKQVAITLPKMNAAIFTQEQVNAIAYQIMQRCLQGKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33710; Mature: 33579
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: PS50965 NERD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELLKGIFSVSLILLGMGAILVPMFFVIRHRDRTVKLPIDREKLNRLPGFGIQKQIQEL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHCCCCCCHHHHHHHH QFDILSAMLMSVIVVTIPFAFEGLRGYLDKGTFPLAFIGFIVLGPIYFVVKTYRSMTRLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KLRLGHTAELATAAELMRLQGLGYQVFHDIQADGFNIDHLVVGINGVFAIETKGRHKWYS HHHCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCCC DKKNESNGGQHKAHELFYRDGKLVFPSWTETAPIEQAQRQAKWVSEWLTKAVGQSIPVMP CCCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC VLVFPGWMVKSQTKPPFPIINHKQVAITLPKMNAAIFTQEQVNAIAYQIMQRCLQGKP CEECCCCEECCCCCCCCCCCCCCEEEEEECCCCCHHCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TELLKGIFSVSLILLGMGAILVPMFFVIRHRDRTVKLPIDREKLNRLPGFGIQKQIQEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHCCCCCCHHHHHHHH QFDILSAMLMSVIVVTIPFAFEGLRGYLDKGTFPLAFIGFIVLGPIYFVVKTYRSMTRLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KLRLGHTAELATAAELMRLQGLGYQVFHDIQADGFNIDHLVVGINGVFAIETKGRHKWYS HHHCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCCC DKKNESNGGQHKAHELFYRDGKLVFPSWTETAPIEQAQRQAKWVSEWLTKAVGQSIPVMP CCCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC VLVFPGWMVKSQTKPPFPIINHKQVAITLPKMNAAIFTQEQVNAIAYQIMQRCLQGKP CEECCCCEECCCCCCCCCCCCCCEEEEEECCCCCHHCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA