| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174339
Identifier: 126174339
GI number: 126174339
Start: 2461020
End: 2462081
Strand: Direct
Name: 126174339
Synonym: Sbal_2120
Alternate gene names: NA
Gene position: 2461020-2462081 (Clockwise)
Preceding gene: 126174338
Following gene: 126174340
Centisome position: 48.0
GC content: 42.18
Gene sequence:
>1062_bases ATGCCGATTGATGCGAGAAGACAAGTTGAATTTATTAGCTATTTACAACGTCTGTTGGTTGAAGGGGATTTCGTTGCAAC ATATAAATTTGCCTTACTGCATGCGATCGCCGATATCTGCATCGAACGGCCATTAATACTCAATGCCGATCCTGAACAGA AAACCGCGATCAGTATTGATGAACTGGTTGAAAAGTTTATTGAACTCTATTGGCAACACTCCTTACCTTTTGGTGCTGTT AATGCGCATTTTGTTCTACTCCAAAATAATGGAAAGCAATCAGCCTTAATCAACAGTTTGATTGAGCTACGTAATCAAGG CGTTAACAGTTTATCCCAGTTAAAAGCGCATCTTAGTTATCCTGCTCTATTCAGTAAAACGCGCGGCACCGTTAAAGAGG GCCCGTTATGGCGCTTACAAATTTTGTCCCGAAACGCAGATTGTTTTCTTTATCTCCATGATAAAACTAAAAATTATATC GAGTTGAATCCGGGTATCGCATTCTGCTTCAGGCGATTTCATGATTTAGTGGTGTCATTAGCTCGCACACAATGGGTGCA GAAAGTCGCCGAGTTTCCCGCAAATCAGGTCGTTATTGGCAATAAAGGCAATTTAAGCGAGTTTCTATTTGGCAGTGACC GACAGACGATCACTCACGCTAGACCTGTGCTGTTTGATATCCAAAAGGGCCAATGCTTTTATTGCCATAAGTCATTAAAA GAAACTGGCGAAGTGGATCACTTTATTCCTTGGGCACGATATCCTAATGATTTAGGGCATAATTTTGTCCTCGCTCATAG CAGTTGCAATAACAATAAACGCGATCATCTTGCCGCACAGCGTCACAAAGATAACTGGTATGAGCAAAACATTATCCAGC ATGGCCAAGCGTTACATTCTGAACTCAGCCGATATTTCGTCTGTGAAAGTGATCGCTCCGAAGCCATCACCACTTGGGCC TATCAGCTTGCAGGGCAAAATCGCTCACCACTCTGGCTCGATAAAAAAACCTTAGTGCCTTTTAACGCGATAGATAATGA TTTATCGAGCACAGCAATTTAG
Upstream 100 bases:
>100_bases GGTCGCACGCAAGTGCATTGGCAGACCCTCGTATTTACACCAAAAGCCGTCCCAAACGTTACTGTTCCCGAAGCAAACGC CATTATTCAGGGTCGTCATC
Downstream 100 bases:
>100_bases AAACAAAGAAGTAAGTAGCGTTTATTCAGTCTCAGAATCTTAATTATCTAATTTTTAAAGGAAAGGTATGACAGAGTTAC TAAAAGGGATTTTTTCAGTT
Product: HNH nuclease
Products: NA
Alternate protein names: HNH Endonuclease
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MPIDARRQVEFISYLQRLLVEGDFVATYKFALLHAIADICIERPLILNADPEQKTAISIDELVEKFIELYWQHSLPFGAV NAHFVLLQNNGKQSALINSLIELRNQGVNSLSQLKAHLSYPALFSKTRGTVKEGPLWRLQILSRNADCFLYLHDKTKNYI ELNPGIAFCFRRFHDLVVSLARTQWVQKVAEFPANQVVIGNKGNLSEFLFGSDRQTITHARPVLFDIQKGQCFYCHKSLK ETGEVDHFIPWARYPNDLGHNFVLAHSSCNNNKRDHLAAQRHKDNWYEQNIIQHGQALHSELSRYFVCESDRSEAITTWA YQLAGQNRSPLWLDKKTLVPFNAIDNDLSSTAI
Sequences:
>Translated_353_residues MPIDARRQVEFISYLQRLLVEGDFVATYKFALLHAIADICIERPLILNADPEQKTAISIDELVEKFIELYWQHSLPFGAV NAHFVLLQNNGKQSALINSLIELRNQGVNSLSQLKAHLSYPALFSKTRGTVKEGPLWRLQILSRNADCFLYLHDKTKNYI ELNPGIAFCFRRFHDLVVSLARTQWVQKVAEFPANQVVIGNKGNLSEFLFGSDRQTITHARPVLFDIQKGQCFYCHKSLK ETGEVDHFIPWARYPNDLGHNFVLAHSSCNNNKRDHLAAQRHKDNWYEQNIIQHGQALHSELSRYFVCESDRSEAITTWA YQLAGQNRSPLWLDKKTLVPFNAIDNDLSSTAI >Mature_352_residues PIDARRQVEFISYLQRLLVEGDFVATYKFALLHAIADICIERPLILNADPEQKTAISIDELVEKFIELYWQHSLPFGAVN AHFVLLQNNGKQSALINSLIELRNQGVNSLSQLKAHLSYPALFSKTRGTVKEGPLWRLQILSRNADCFLYLHDKTKNYIE LNPGIAFCFRRFHDLVVSLARTQWVQKVAEFPANQVVIGNKGNLSEFLFGSDRQTITHARPVLFDIQKGQCFYCHKSLKE TGEVDHFIPWARYPNDLGHNFVLAHSSCNNNKRDHLAAQRHKDNWYEQNIIQHGQALHSELSRYFVCESDRSEAITTWAY QLAGQNRSPLWLDKKTLVPFNAIDNDLSSTAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40508; Mature: 40376
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIDARRQVEFISYLQRLLVEGDFVATYKFALLHAIADICIERPLILNADPEQKTAISID CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHEECHH ELVEKFIELYWQHSLPFGAVNAHFVLLQNNGKQSALINSLIELRNQGVNSLSQLKAHLSY HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCC PALFSKTRGTVKEGPLWRLQILSRNADCFLYLHDKTKNYIELNPGIAFCFRRFHDLVVSL HHHHHHCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHH ARTQWVQKVAEFPANQVVIGNKGNLSEFLFGSDRQTITHARPVLFDIQKGQCFYCHKSLK HHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCCCHHHHCCCEEEECCCCCEEEHHHHHH ETGEVDHFIPWARYPNDLGHNFVLAHSSCNNNKRDHLAAQRHKDNWYEQNIIQHGQALHS HCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH ELSRYFVCESDRSEAITTWAYQLAGQNRSPLWLDKKTLVPFNAIDNDLSSTAI HHHHEEEECCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCHHHCCCHHHCCC >Mature Secondary Structure PIDARRQVEFISYLQRLLVEGDFVATYKFALLHAIADICIERPLILNADPEQKTAISID CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHEECHH ELVEKFIELYWQHSLPFGAVNAHFVLLQNNGKQSALINSLIELRNQGVNSLSQLKAHLSY HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCC PALFSKTRGTVKEGPLWRLQILSRNADCFLYLHDKTKNYIELNPGIAFCFRRFHDLVVSL HHHHHHCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHH ARTQWVQKVAEFPANQVVIGNKGNLSEFLFGSDRQTITHARPVLFDIQKGQCFYCHKSLK HHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCCCHHHHCCCEEEECCCCCEEEHHHHHH ETGEVDHFIPWARYPNDLGHNFVLAHSSCNNNKRDHLAAQRHKDNWYEQNIIQHGQALHS HCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH ELSRYFVCESDRSEAITTWAYQLAGQNRSPLWLDKKTLVPFNAIDNDLSSTAI HHHHEEEECCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA