Definition Shewanella baltica OS155 chromosome, complete genome.
Accession NC_009052
Length 5,127,376

Click here to switch to the map view.

The map label for this gene is 126174339

Identifier: 126174339

GI number: 126174339

Start: 2461020

End: 2462081

Strand: Direct

Name: 126174339

Synonym: Sbal_2120

Alternate gene names: NA

Gene position: 2461020-2462081 (Clockwise)

Preceding gene: 126174338

Following gene: 126174340

Centisome position: 48.0

GC content: 42.18

Gene sequence:

>1062_bases
ATGCCGATTGATGCGAGAAGACAAGTTGAATTTATTAGCTATTTACAACGTCTGTTGGTTGAAGGGGATTTCGTTGCAAC
ATATAAATTTGCCTTACTGCATGCGATCGCCGATATCTGCATCGAACGGCCATTAATACTCAATGCCGATCCTGAACAGA
AAACCGCGATCAGTATTGATGAACTGGTTGAAAAGTTTATTGAACTCTATTGGCAACACTCCTTACCTTTTGGTGCTGTT
AATGCGCATTTTGTTCTACTCCAAAATAATGGAAAGCAATCAGCCTTAATCAACAGTTTGATTGAGCTACGTAATCAAGG
CGTTAACAGTTTATCCCAGTTAAAAGCGCATCTTAGTTATCCTGCTCTATTCAGTAAAACGCGCGGCACCGTTAAAGAGG
GCCCGTTATGGCGCTTACAAATTTTGTCCCGAAACGCAGATTGTTTTCTTTATCTCCATGATAAAACTAAAAATTATATC
GAGTTGAATCCGGGTATCGCATTCTGCTTCAGGCGATTTCATGATTTAGTGGTGTCATTAGCTCGCACACAATGGGTGCA
GAAAGTCGCCGAGTTTCCCGCAAATCAGGTCGTTATTGGCAATAAAGGCAATTTAAGCGAGTTTCTATTTGGCAGTGACC
GACAGACGATCACTCACGCTAGACCTGTGCTGTTTGATATCCAAAAGGGCCAATGCTTTTATTGCCATAAGTCATTAAAA
GAAACTGGCGAAGTGGATCACTTTATTCCTTGGGCACGATATCCTAATGATTTAGGGCATAATTTTGTCCTCGCTCATAG
CAGTTGCAATAACAATAAACGCGATCATCTTGCCGCACAGCGTCACAAAGATAACTGGTATGAGCAAAACATTATCCAGC
ATGGCCAAGCGTTACATTCTGAACTCAGCCGATATTTCGTCTGTGAAAGTGATCGCTCCGAAGCCATCACCACTTGGGCC
TATCAGCTTGCAGGGCAAAATCGCTCACCACTCTGGCTCGATAAAAAAACCTTAGTGCCTTTTAACGCGATAGATAATGA
TTTATCGAGCACAGCAATTTAG

Upstream 100 bases:

>100_bases
GGTCGCACGCAAGTGCATTGGCAGACCCTCGTATTTACACCAAAAGCCGTCCCAAACGTTACTGTTCCCGAAGCAAACGC
CATTATTCAGGGTCGTCATC

Downstream 100 bases:

>100_bases
AAACAAAGAAGTAAGTAGCGTTTATTCAGTCTCAGAATCTTAATTATCTAATTTTTAAAGGAAAGGTATGACAGAGTTAC
TAAAAGGGATTTTTTCAGTT

Product: HNH nuclease

Products: NA

Alternate protein names: HNH Endonuclease

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MPIDARRQVEFISYLQRLLVEGDFVATYKFALLHAIADICIERPLILNADPEQKTAISIDELVEKFIELYWQHSLPFGAV
NAHFVLLQNNGKQSALINSLIELRNQGVNSLSQLKAHLSYPALFSKTRGTVKEGPLWRLQILSRNADCFLYLHDKTKNYI
ELNPGIAFCFRRFHDLVVSLARTQWVQKVAEFPANQVVIGNKGNLSEFLFGSDRQTITHARPVLFDIQKGQCFYCHKSLK
ETGEVDHFIPWARYPNDLGHNFVLAHSSCNNNKRDHLAAQRHKDNWYEQNIIQHGQALHSELSRYFVCESDRSEAITTWA
YQLAGQNRSPLWLDKKTLVPFNAIDNDLSSTAI

Sequences:

>Translated_353_residues
MPIDARRQVEFISYLQRLLVEGDFVATYKFALLHAIADICIERPLILNADPEQKTAISIDELVEKFIELYWQHSLPFGAV
NAHFVLLQNNGKQSALINSLIELRNQGVNSLSQLKAHLSYPALFSKTRGTVKEGPLWRLQILSRNADCFLYLHDKTKNYI
ELNPGIAFCFRRFHDLVVSLARTQWVQKVAEFPANQVVIGNKGNLSEFLFGSDRQTITHARPVLFDIQKGQCFYCHKSLK
ETGEVDHFIPWARYPNDLGHNFVLAHSSCNNNKRDHLAAQRHKDNWYEQNIIQHGQALHSELSRYFVCESDRSEAITTWA
YQLAGQNRSPLWLDKKTLVPFNAIDNDLSSTAI
>Mature_352_residues
PIDARRQVEFISYLQRLLVEGDFVATYKFALLHAIADICIERPLILNADPEQKTAISIDELVEKFIELYWQHSLPFGAVN
AHFVLLQNNGKQSALINSLIELRNQGVNSLSQLKAHLSYPALFSKTRGTVKEGPLWRLQILSRNADCFLYLHDKTKNYIE
LNPGIAFCFRRFHDLVVSLARTQWVQKVAEFPANQVVIGNKGNLSEFLFGSDRQTITHARPVLFDIQKGQCFYCHKSLKE
TGEVDHFIPWARYPNDLGHNFVLAHSSCNNNKRDHLAAQRHKDNWYEQNIIQHGQALHSELSRYFVCESDRSEAITTWAY
QLAGQNRSPLWLDKKTLVPFNAIDNDLSSTAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40508; Mature: 40376

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIDARRQVEFISYLQRLLVEGDFVATYKFALLHAIADICIERPLILNADPEQKTAISID
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHEECHH
ELVEKFIELYWQHSLPFGAVNAHFVLLQNNGKQSALINSLIELRNQGVNSLSQLKAHLSY
HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCC
PALFSKTRGTVKEGPLWRLQILSRNADCFLYLHDKTKNYIELNPGIAFCFRRFHDLVVSL
HHHHHHCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHH
ARTQWVQKVAEFPANQVVIGNKGNLSEFLFGSDRQTITHARPVLFDIQKGQCFYCHKSLK
HHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCCCHHHHCCCEEEECCCCCEEEHHHHHH
ETGEVDHFIPWARYPNDLGHNFVLAHSSCNNNKRDHLAAQRHKDNWYEQNIIQHGQALHS
HCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
ELSRYFVCESDRSEAITTWAYQLAGQNRSPLWLDKKTLVPFNAIDNDLSSTAI
HHHHEEEECCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCHHHCCCHHHCCC
>Mature Secondary Structure 
PIDARRQVEFISYLQRLLVEGDFVATYKFALLHAIADICIERPLILNADPEQKTAISID
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHEECHH
ELVEKFIELYWQHSLPFGAVNAHFVLLQNNGKQSALINSLIELRNQGVNSLSQLKAHLSY
HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCC
PALFSKTRGTVKEGPLWRLQILSRNADCFLYLHDKTKNYIELNPGIAFCFRRFHDLVVSL
HHHHHHCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHH
ARTQWVQKVAEFPANQVVIGNKGNLSEFLFGSDRQTITHARPVLFDIQKGQCFYCHKSLK
HHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCCCHHHHCCCEEEECCCCCEEEHHHHHH
ETGEVDHFIPWARYPNDLGHNFVLAHSSCNNNKRDHLAAQRHKDNWYEQNIIQHGQALHS
HCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
ELSRYFVCESDRSEAITTWAYQLAGQNRSPLWLDKKTLVPFNAIDNDLSSTAI
HHHHEEEECCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA