| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174240
Identifier: 126174240
GI number: 126174240
Start: 2339270
End: 2339617
Strand: Direct
Name: 126174240
Synonym: Sbal_2018
Alternate gene names: NA
Gene position: 2339270-2339617 (Clockwise)
Preceding gene: 126174239
Following gene: 126174244
Centisome position: 45.62
GC content: 37.93
Gene sequence:
>348_bases ATGTCTGTGGTGAGACTTCAATATACCAAGACGTTTGAAGATACTGTCGATAGCGCGATATCTCACTACTCACAATGGAA TGATGAGATCGCTATTATCGAGTGTATCGAGATGGTTATTGATGGCTTTGAAGCATCCGTGACGCAAAATCCTTTGAGTT ACGCACTATGTCAGGAATTAGTTGAGCTTGGTGTTACTCAGGTTAGGCATGCCGTTAAAGAGGATTTTAGAATATTGTAT GAGGTCAGTTATGTTAACGGTGAAACCATTATTACAGCGTTGCTTTTTTTGAGCCAACGACAAAGCATACAAAATCAGTT AATTAACCACTGTTTAATGTATAAATAA
Upstream 100 bases:
>100_bases AGTTTTGCGAAAAGTGACCAACAAAATGGCCGCACGATGTCATCAAGTGCATTCAAGGAACGCTTGGCGGATCGTAAACT CGCGTTAAAGGATAAGTAGT
Downstream 100 bases:
>100_bases CGCACGTTACCTAGTTATTCATGTTGAAGCCTCTACACTCAATTTTACCGCTTTAGCAATGGTAGAACGACTGCATTTAA GCAGACTCTGCACTTGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Plasmid Stabilization System Protein Protein
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MSVVRLQYTKTFEDTVDSAISHYSQWNDEIAIIECIEMVIDGFEASVTQNPLSYALCQELVELGVTQVRHAVKEDFRILY EVSYVNGETIITALLFLSQRQSIQNQLINHCLMYK
Sequences:
>Translated_115_residues MSVVRLQYTKTFEDTVDSAISHYSQWNDEIAIIECIEMVIDGFEASVTQNPLSYALCQELVELGVTQVRHAVKEDFRILY EVSYVNGETIITALLFLSQRQSIQNQLINHCLMYK >Mature_114_residues SVVRLQYTKTFEDTVDSAISHYSQWNDEIAIIECIEMVIDGFEASVTQNPLSYALCQELVELGVTQVRHAVKEDFRILYE VSYVNGETIITALLFLSQRQSIQNQLINHCLMYK
Specific function: Unknown
COG id: COG3668
COG function: function code R; Plasmid stabilization system protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13252; Mature: 13121
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVVRLQYTKTFEDTVDSAISHYSQWNDEIAIIECIEMVIDGFEASVTQNPLSYALCQEL CCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VELGVTQVRHAVKEDFRILYEVSYVNGETIITALLFLSQRQSIQNQLINHCLMYK HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVVRLQYTKTFEDTVDSAISHYSQWNDEIAIIECIEMVIDGFEASVTQNPLSYALCQEL CEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VELGVTQVRHAVKEDFRILYEVSYVNGETIITALLFLSQRQSIQNQLINHCLMYK HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA