| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is torS [C]
Identifier: 126174235
GI number: 126174235
Start: 2333742
End: 2335469
Strand: Direct
Name: torS [C]
Synonym: Sbal_2013
Alternate gene names: 126174235
Gene position: 2333742-2335469 (Clockwise)
Preceding gene: 126174234
Following gene: 126174236
Centisome position: 45.52
GC content: 45.37
Gene sequence:
>1728_bases ATGGCCTTGGCAAACATTGATTGGATATCCACAATGAAAAAGCCCCATGCATTGAGCGTATTCTATGCCACATTGGCTGC CGCATTTTTATTACTTTTGGCCATGTCTATAACGTTCTATTTGTATATGGACTCTAGGCTCGCAATTGATAAGGCCCAGC TCAATCGCGAGCATTCTCTTCACTTAGCTGATGAGCTACGGCAAACATCTGATGATCTTACTCGCATGGTTCGCTTATAC GTGGTGACAGGTAACCCTATGTATAAGAAACAATTTCAGGAAGTGCTCGACATTCGTGATGGTCTAGTGCCGCGTCCTGA AAATTACTCTTCTATATACTGGGATTTAGTTCTTGAGTCTGATAAAAGGCCTCGCCCACTAAGTACTGCTGCAAAGTTAA CGGATTTAATGCGTCAGGCCGATGTCACCGAGCATGAATTCAGTTTACTTAACGCTGCCAAAGATAGCTCTGACGCTCTT GTTAATTTGGAGCGCCAAGCAATGGTACTTCGCGAGCAAGCAACAAGTAATGGACAAACACAAAGCTGGCAGGCCATTAC CATTATTCACTCAAACGATTATCAAAAAGCCAAAGCCGGCATTATGTTACCTATTTTAAATTTCACCGTAGCACTGGATG AACGCACGCAACTTAACGTGCAGTCTCATTTACAAACTGCAACTGCTCTACAATATTGGCTCACCTTACTAGCCATTTTA TCGGCACTCACTATTGGTTTAGCGGCATGGGCATTACAACGTATTCTCGGTGCATCTCTGGGCACCATTGAAAAACATAT ATCGCACCTCGGTCATGGCGAGTATGTAGATGCACTTAGCGTTCATGGTGGGTTAGAAGCTAGCATTGCAGGCTGTATTG CACGCGCAGAAAAGCGCCTCACTGAAATTGAGATTGACCGTGAGCGACAGCAAGCGGAGCTAAAAAAAGCTGAGCATTCT TTAATGGAGTCAGAACGACTCGCCTCTCTCGGAGCATTAGTTGCTGGGGTTGCCCACGAACTAAATACTCCTATCGGCAT TGCCGTAACGGCAGCCTCTGCGCTAGAAGCCAATACTAAAGATATAGCGGCACAAATTAAAGACGGCAAGATGCTCCGTT CAACATTCGATAATTATATTGAGCACTGTAGCCAAGGCACACCCATGATTTTACGCTCCTGCTTGCGTGCGGCCAACCTC ATCGCCAGTTTTAAAAACATATCAGTAGACCAAACATCCGAGCAGCGTCGTATCTTTAAGCTACACGACGTCGCCAATGA TCATATCACTATGTTACGTACCGCCCATAAAAACGTAAAATGGACCTTCGAAAACACTATCAGCCCTGAAATTAGTTGCG ATGGTTACCCTGGGGCGCTTGGGCAAGTAATCTCAAATCTACTACACAATGCAGCAGTACATGCCTTCGAACCAACCGAC AGTGGCACAATCACCATAAGCGCTGAAATAAAAGACGACTACGTTACTATTTATGTGACCGATAACGGCAAGGGTATGAG CGAAGTTATTTTAGCGCGCATATGGCAGCCTTTCTTCACCACTAAACTTGGCTCGGGTGGTTCGGGGCTAGGGCTTTCAA TTTGCCGAAATATTGTAGTGGGCATACTGGGTGGTTCCCTGATTGCCAGCTCCGCAGAAGGTCAAGGAACCTGCTTCACC TTACATCTGCCTTTAACCGCATCAATAAATCAGATTTATCATAAGTAG
Upstream 100 bases:
>100_bases ATCCTCGGTCGCAGCAGCAGCCAGTTTGATCCTCTTGTGGTGCAAGCTATTTTAGCTTTAGTCACAGAAAAACGACTCCC GCCAGTGTTGTGTGAATACT
Downstream 100 bases:
>100_bases TAAATTAATCACGCAACCAATAAAAACCCGTCATTGGTATAGTGTATTTTCACAAAAGAGAGACTATTAGCTAATCGTAA AAACACAACCACAGGTATTA
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 575; Mature: 574
Protein sequence:
>575_residues MALANIDWISTMKKPHALSVFYATLAAAFLLLLAMSITFYLYMDSRLAIDKAQLNREHSLHLADELRQTSDDLTRMVRLY VVTGNPMYKKQFQEVLDIRDGLVPRPENYSSIYWDLVLESDKRPRPLSTAAKLTDLMRQADVTEHEFSLLNAAKDSSDAL VNLERQAMVLREQATSNGQTQSWQAITIIHSNDYQKAKAGIMLPILNFTVALDERTQLNVQSHLQTATALQYWLTLLAIL SALTIGLAAWALQRILGASLGTIEKHISHLGHGEYVDALSVHGGLEASIAGCIARAEKRLTEIEIDRERQQAELKKAEHS LMESERLASLGALVAGVAHELNTPIGIAVTAASALEANTKDIAAQIKDGKMLRSTFDNYIEHCSQGTPMILRSCLRAANL IASFKNISVDQTSEQRRIFKLHDVANDHITMLRTAHKNVKWTFENTISPEISCDGYPGALGQVISNLLHNAAVHAFEPTD SGTITISAEIKDDYVTIYVTDNGKGMSEVILARIWQPFFTTKLGSGGSGLGLSICRNIVVGILGGSLIASSAEGQGTCFT LHLPLTASINQIYHK
Sequences:
>Translated_575_residues MALANIDWISTMKKPHALSVFYATLAAAFLLLLAMSITFYLYMDSRLAIDKAQLNREHSLHLADELRQTSDDLTRMVRLY VVTGNPMYKKQFQEVLDIRDGLVPRPENYSSIYWDLVLESDKRPRPLSTAAKLTDLMRQADVTEHEFSLLNAAKDSSDAL VNLERQAMVLREQATSNGQTQSWQAITIIHSNDYQKAKAGIMLPILNFTVALDERTQLNVQSHLQTATALQYWLTLLAIL SALTIGLAAWALQRILGASLGTIEKHISHLGHGEYVDALSVHGGLEASIAGCIARAEKRLTEIEIDRERQQAELKKAEHS LMESERLASLGALVAGVAHELNTPIGIAVTAASALEANTKDIAAQIKDGKMLRSTFDNYIEHCSQGTPMILRSCLRAANL IASFKNISVDQTSEQRRIFKLHDVANDHITMLRTAHKNVKWTFENTISPEISCDGYPGALGQVISNLLHNAAVHAFEPTD SGTITISAEIKDDYVTIYVTDNGKGMSEVILARIWQPFFTTKLGSGGSGLGLSICRNIVVGILGGSLIASSAEGQGTCFT LHLPLTASINQIYHK >Mature_574_residues ALANIDWISTMKKPHALSVFYATLAAAFLLLLAMSITFYLYMDSRLAIDKAQLNREHSLHLADELRQTSDDLTRMVRLYV VTGNPMYKKQFQEVLDIRDGLVPRPENYSSIYWDLVLESDKRPRPLSTAAKLTDLMRQADVTEHEFSLLNAAKDSSDALV NLERQAMVLREQATSNGQTQSWQAITIIHSNDYQKAKAGIMLPILNFTVALDERTQLNVQSHLQTATALQYWLTLLAILS ALTIGLAAWALQRILGASLGTIEKHISHLGHGEYVDALSVHGGLEASIAGCIARAEKRLTEIEIDRERQQAELKKAEHSL MESERLASLGALVAGVAHELNTPIGIAVTAASALEANTKDIAAQIKDGKMLRSTFDNYIEHCSQGTPMILRSCLRAANLI ASFKNISVDQTSEQRRIFKLHDVANDHITMLRTAHKNVKWTFENTISPEISCDGYPGALGQVISNLLHNAAVHAFEPTDS GTITISAEIKDDYVTIYVTDNGKGMSEVILARIWQPFFTTKLGSGGSGLGLSICRNIVVGILGGSLIASSAEGQGTCFTL HLPLTASINQIYHK
Specific function: Member Of The Two-Component Regulatory System Tors/Torr Involved In The Anaerobic Utilization Of Trimethylamine-N-Oxide (Tmao). Detects The Presence Of Tmao In The Medium And, In Response, Activates Torr Via A Four-Step Phosphorelay. When Tmao Is Removed,
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI87081816, Length=378, Percent_Identity=26.7195767195767, Blast_Score=93, Evalue=6e-20, Organism=Escherichia coli, GI145693157, Length=267, Percent_Identity=29.2134831460674, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1790436, Length=268, Percent_Identity=32.8358208955224, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1788549, Length=262, Percent_Identity=29.0076335877863, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1790861, Length=264, Percent_Identity=26.5151515151515, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR001638 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00497 SBP_bac_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 63232; Mature: 63101
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALANIDWISTMKKPHALSVFYATLAAAFLLLLAMSITFYLYMDSRLAIDKAQLNREHSL CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCCCCH HLADELRQTSDDLTRMVRLYVVTGNPMYKKQFQEVLDIRDGLVPRPENYSSIYWDLVLES HHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECC DKRPRPLSTAAKLTDLMRQADVTEHEFSLLNAAKDSSDALVNLERQAMVLREQATSNGQT CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHEEHHHHHHHHHHHHCCCCCC QSWQAITIIHSNDYQKAKAGIMLPILNFTVALDERTQLNVQSHLQTATALQYWLTLLAIL CCEEEEEEEECCCCHHHHCCEEEEEHHEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHH SALTIGLAAWALQRILGASLGTIEKHISHLGHGEYVDALSVHGGLEASIAGCIARAEKRL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH TEIEIDRERQQAELKKAEHSLMESERLASLGALVAGVAHELNTPIGIAVTAASALEANTK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCHH DIAAQIKDGKMLRSTFDNYIEHCSQGTPMILRSCLRAANLIASFKNISVDQTSEQRRIFK HHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LHDVANDHITMLRTAHKNVKWTFENTISPEISCDGYPGALGQVISNLLHNAAVHAFEPTD HHHCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCC SGTITISAEIKDDYVTIYVTDNGKGMSEVILARIWQPFFTTKLGSGGSGLGLSICRNIVV CCEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH GILGGSLIASSAEGQGTCFTLHLPLTASINQIYHK HHHCCHHHCCCCCCCCEEEEEEECCHHHHHHHHCC >Mature Secondary Structure ALANIDWISTMKKPHALSVFYATLAAAFLLLLAMSITFYLYMDSRLAIDKAQLNREHSL CCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCCCCH HLADELRQTSDDLTRMVRLYVVTGNPMYKKQFQEVLDIRDGLVPRPENYSSIYWDLVLES HHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECC DKRPRPLSTAAKLTDLMRQADVTEHEFSLLNAAKDSSDALVNLERQAMVLREQATSNGQT CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHEEHHHHHHHHHHHHCCCCCC QSWQAITIIHSNDYQKAKAGIMLPILNFTVALDERTQLNVQSHLQTATALQYWLTLLAIL CCEEEEEEEECCCCHHHHCCEEEEEHHEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHH SALTIGLAAWALQRILGASLGTIEKHISHLGHGEYVDALSVHGGLEASIAGCIARAEKRL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH TEIEIDRERQQAELKKAEHSLMESERLASLGALVAGVAHELNTPIGIAVTAASALEANTK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCHH DIAAQIKDGKMLRSTFDNYIEHCSQGTPMILRSCLRAANLIASFKNISVDQTSEQRRIFK HHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LHDVANDHITMLRTAHKNVKWTFENTISPEISCDGYPGALGQVISNLLHNAAVHAFEPTD HHHCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCC SGTITISAEIKDDYVTIYVTDNGKGMSEVILARIWQPFFTTKLGSGGSGLGLSICRNIVV CCEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH GILGGSLIASSAEGQGTCFTLHLPLTASINQIYHK HHHCCHHHCCCCCCCCEEEEEEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1333793 [H]