Definition | Shewanella baltica OS155 chromosome, complete genome. |
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Accession | NC_009052 |
Length | 5,127,376 |
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The map label for this gene is 126174204
Identifier: 126174204
GI number: 126174204
Start: 2294819
End: 2295349
Strand: Direct
Name: 126174204
Synonym: Sbal_1980
Alternate gene names: NA
Gene position: 2294819-2295349 (Clockwise)
Preceding gene: 126174203
Following gene: 126174205
Centisome position: 44.76
GC content: 45.57
Gene sequence:
>531_bases ATGACTGATATTACAGGCGCGACTGCCGACACTATGAATAATTTTATTGGTTTGAGCGCGGTATTAACCGGCTTTGCAAC CAGTATTATTGCCCCGACGTTGGATCCCGTGGATATTAAATCCGAATACTTACCTGTATTTACGCAAAGGATAACCGAAG AATCGAAGGACCCAACCTTAGTGACTACTATTCTGCAAAAATATGCGGCGTTAAAAGCGCAGCAATTATCAGATCAACAA ATTGGCACGCAAATGCTGGCGCCAGACAACGGGACGAATTTTGTGTTGGCCTGTCGTAAATTGATTTTTATGTGGTACTC AGGTGCATGGCCAACCATTATTCCCGCGACGGATAAAGATCCGGAGACCACAGTTAGCGATATGATTTCGGCAAAAAGTT ATACCACGGGTCTAGTCTGGCAAGTTATGCAGGCTCATCCTATGGGGGATTCAAATTATCGTTACGGCTATTGGGCAAAA CCACCCGCAGCACTGTCGGCATATACGGGTCATCAAGGAGGTGCAGTATGA
Upstream 100 bases:
>100_bases TGTATGGCTTGTCACAATAATGCGGCAACCACTAACGGCAATTTTGCTGATTTCACTTACTTGCTGCAACGCGCGCAATA ATTTATGAAAGGAACTCATC
Downstream 100 bases:
>100_bases GCGCTCAAACCAATTACGATGTCATTATTGTGGGCTCTGGTATTGCGGGCTCTATCATGGCTTATCAACTGGGGATGGCG GGGAAAAAAGTATTAATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MTDITGATADTMNNFIGLSAVLTGFATSIIAPTLDPVDIKSEYLPVFTQRITEESKDPTLVTTILQKYAALKAQQLSDQQ IGTQMLAPDNGTNFVLACRKLIFMWYSGAWPTIIPATDKDPETTVSDMISAKSYTTGLVWQVMQAHPMGDSNYRYGYWAK PPAALSAYTGHQGGAV
Sequences:
>Translated_176_residues MTDITGATADTMNNFIGLSAVLTGFATSIIAPTLDPVDIKSEYLPVFTQRITEESKDPTLVTTILQKYAALKAQQLSDQQ IGTQMLAPDNGTNFVLACRKLIFMWYSGAWPTIIPATDKDPETTVSDMISAKSYTTGLVWQVMQAHPMGDSNYRYGYWAK PPAALSAYTGHQGGAV >Mature_175_residues TDITGATADTMNNFIGLSAVLTGFATSIIAPTLDPVDIKSEYLPVFTQRITEESKDPTLVTTILQKYAALKAQQLSDQQI GTQMLAPDNGTNFVLACRKLIFMWYSGAWPTIIPATDKDPETTVSDMISAKSYTTGLVWQVMQAHPMGDSNYRYGYWAKP PAALSAYTGHQGGAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19134; Mature: 19003
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDITGATADTMNNFIGLSAVLTGFATSIIAPTLDPVDIKSEYLPVFTQRITEESKDPTL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHH VTTILQKYAALKAQQLSDQQIGTQMLAPDNGTNFVLACRKLIFMWYSGAWPTIIPATDKD HHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCC PETTVSDMISAKSYTTGLVWQVMQAHPMGDSNYRYGYWAKPPAALSAYTGHQGGAV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHCCCCCCCCC >Mature Secondary Structure TDITGATADTMNNFIGLSAVLTGFATSIIAPTLDPVDIKSEYLPVFTQRITEESKDPTL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHH VTTILQKYAALKAQQLSDQQIGTQMLAPDNGTNFVLACRKLIFMWYSGAWPTIIPATDKD HHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCC PETTVSDMISAKSYTTGLVWQVMQAHPMGDSNYRYGYWAKPPAALSAYTGHQGGAV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA