Definition | Shewanella baltica OS155 chromosome, complete genome. |
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Accession | NC_009052 |
Length | 5,127,376 |
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The map label for this gene is 126174203
Identifier: 126174203
GI number: 126174203
Start: 2293483
End: 2294799
Strand: Direct
Name: 126174203
Synonym: Sbal_1979
Alternate gene names: NA
Gene position: 2293483-2294799 (Clockwise)
Preceding gene: 126174201
Following gene: 126174204
Centisome position: 44.73
GC content: 46.01
Gene sequence:
>1317_bases ATGTATATCAAATACTTTAGTTATAGCGCGTTGTTCTTGTGTATGAGTGCGACTGTGCAAGCGGAATCGCCAGCCGTTAC CAAAGCCGCCGCAAGTTTACCAACCTTAAGCCCGGTTATACCATTGGAAATCGCTGCAAAACCGCCTTTCTCTCTCGAGA GTTTGCAACATGATTTTGATGATTTTTCTTGGCAATCCTTTATCGCACTGAATTGGCCTGCCAATGCCGATGGTACACCC AATACCATGTCCACCATTGGGCAAAAAACTAACCAGCCAGTCGTGTGGCTGCATTGGAAGGAAAGCCGGGAGATTTTTTT ACCCGATGGCGTAAAACCACCTGGGTGGGATCAGTCCAATAATGTGCCGGATGTTTGCAAAAGTATTGATCCCAAGTCCA TTCCTCAAGGGACTATTTATTTAACGCAAGTAGGGAAGACCCCGAATGTGTTGGATGAAAGTGGCGAGCCTTTTACAACG GGTCCATTGATTGATCAAAACGGGCTTTATACCCGTTATGAAATATTAACCAATGAAACCATGTTCAATTTTATTTTGAA CAATAACCTCTACAGTAAAAAAGGCCAGAAACAGTTTAATGCCGATGTTGATTTTACCGCGAGCGACAGTAAAACCGGGC AGGTAGGTTCTATCATGCTTAAGGCCTCATGGATAAAAATGGGCGGCAAGTTTGATGCGACGAACTACTATACGACTTAT GCGCTAGTTTATAACAATCCCGAAGAGCAACATGGGGTCAAGCCCGCGTGTGCGCTTGAACAAGTCGGTTTAGTCGGGTT TCACATTGCCCACAAAACCACGGGTGAACCACAATGGATTTGGTCTACCTTTGAGCATGTCGCTAACGCGCCAACCCAAG GTGAGTTAGCATCATTGTCGGCATATAATTTTTACGATGCTAAATGTACTGACTGCAAAGTTAATGAACCACCAGCACGC CCGTGGGATCCGGCAAATCCGCACACTAAACCAACTCAAGTGGAACGCGTCATTCCTATTACTGCCGACGCTAAAGCCTT AAATGCCAGTTATCACGCTGCACTCGATGCTGTGGTGCCGGGATCGGTATGGATGAATTACGAATTGGTCAGTACGCAAT GGCCTACCGATGCTAAAAATCCCACCGATCCAACGGGCGTGCCTGCTCCCTATTTTTTAGCGAACACCACGCTCGAAACT TATATACAGGGTTCGGTAAAGCAAACATCAAGCAGCTGTATGGCTTGTCACAATAATGCGGCAACCACTAACGGCAATTT TGCTGATTTCACTTACTTGCTGCAACGCGCGCAATAA
Upstream 100 bases:
>100_bases GGCTGGCTTATGCACCTTAGTCAAACAATAGAGGATTAATCGTTTTTATAGCAGTAATGATGGTGAGTGATAAGTTCCAA CAACAAGGAAAGTTAATTTC
Downstream 100 bases:
>100_bases TTTATGAAAGGAACTCATCATGACTGATATTACAGGCGCGACTGCCGACACTATGAATAATTTTATTGGTTTGAGCGCGG TATTAACCGGCTTTGCAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MYIKYFSYSALFLCMSATVQAESPAVTKAAASLPTLSPVIPLEIAAKPPFSLESLQHDFDDFSWQSFIALNWPANADGTP NTMSTIGQKTNQPVVWLHWKESREIFLPDGVKPPGWDQSNNVPDVCKSIDPKSIPQGTIYLTQVGKTPNVLDESGEPFTT GPLIDQNGLYTRYEILTNETMFNFILNNNLYSKKGQKQFNADVDFTASDSKTGQVGSIMLKASWIKMGGKFDATNYYTTY ALVYNNPEEQHGVKPACALEQVGLVGFHIAHKTTGEPQWIWSTFEHVANAPTQGELASLSAYNFYDAKCTDCKVNEPPAR PWDPANPHTKPTQVERVIPITADAKALNASYHAALDAVVPGSVWMNYELVSTQWPTDAKNPTDPTGVPAPYFLANTTLET YIQGSVKQTSSSCMACHNNAATTNGNFADFTYLLQRAQ
Sequences:
>Translated_438_residues MYIKYFSYSALFLCMSATVQAESPAVTKAAASLPTLSPVIPLEIAAKPPFSLESLQHDFDDFSWQSFIALNWPANADGTP NTMSTIGQKTNQPVVWLHWKESREIFLPDGVKPPGWDQSNNVPDVCKSIDPKSIPQGTIYLTQVGKTPNVLDESGEPFTT GPLIDQNGLYTRYEILTNETMFNFILNNNLYSKKGQKQFNADVDFTASDSKTGQVGSIMLKASWIKMGGKFDATNYYTTY ALVYNNPEEQHGVKPACALEQVGLVGFHIAHKTTGEPQWIWSTFEHVANAPTQGELASLSAYNFYDAKCTDCKVNEPPAR PWDPANPHTKPTQVERVIPITADAKALNASYHAALDAVVPGSVWMNYELVSTQWPTDAKNPTDPTGVPAPYFLANTTLET YIQGSVKQTSSSCMACHNNAATTNGNFADFTYLLQRAQ >Mature_438_residues MYIKYFSYSALFLCMSATVQAESPAVTKAAASLPTLSPVIPLEIAAKPPFSLESLQHDFDDFSWQSFIALNWPANADGTP NTMSTIGQKTNQPVVWLHWKESREIFLPDGVKPPGWDQSNNVPDVCKSIDPKSIPQGTIYLTQVGKTPNVLDESGEPFTT GPLIDQNGLYTRYEILTNETMFNFILNNNLYSKKGQKQFNADVDFTASDSKTGQVGSIMLKASWIKMGGKFDATNYYTTY ALVYNNPEEQHGVKPACALEQVGLVGFHIAHKTTGEPQWIWSTFEHVANAPTQGELASLSAYNFYDAKCTDCKVNEPPAR PWDPANPHTKPTQVERVIPITADAKALNASYHAALDAVVPGSVWMNYELVSTQWPTDAKNPTDPTGVPAPYFLANTTLET YIQGSVKQTSSSCMACHNNAATTNGNFADFTYLLQRAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48237; Mature: 48237
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYIKYFSYSALFLCMSATVQAESPAVTKAAASLPTLSPVIPLEIAAKPPFSLESLQHDFD CEEEEECHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHCC DFSWQSFIALNWPANADGTPNTMSTIGQKTNQPVVWLHWKESREIFLPDGVKPPGWDQSN CCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCCCCCCCCC NVPDVCKSIDPKSIPQGTIYLTQVGKTPNVLDESGEPFTTGPLIDQNGLYTRYEILTNET CCHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCEECCCCCEEEEEEEECCE MFNFILNNNLYSKKGQKQFNADVDFTASDSKTGQVGSIMLKASWIKMGGKFDATNYYTTY EEEEEECCCCCCCCCCHHCCCCEEEECCCCCCCCCEEEEEEEEEEECCCEECCCCEEEEE ALVYNNPEEQHGVKPACALEQVGLVGFHIAHKTTGEPQWIWSTFEHVANAPTQGELASLS EEEECCCHHHHCCCHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEE AYNFYDAKCTDCKVNEPPARPWDPANPHTKPTQVERVIPITADAKALNASYHAALDAVVP ECEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHCCHHHHHHHEECC GSVWMNYELVSTQWPTDAKNPTDPTGVPAPYFLANTTLETYIQGSVKQTSSSCMACHNNA CCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCHHHCCCHHHEECCCC ATTNGNFADFTYLLQRAQ CCCCCCHHHHHHHHHHCC >Mature Secondary Structure MYIKYFSYSALFLCMSATVQAESPAVTKAAASLPTLSPVIPLEIAAKPPFSLESLQHDFD CEEEEECHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHCC DFSWQSFIALNWPANADGTPNTMSTIGQKTNQPVVWLHWKESREIFLPDGVKPPGWDQSN CCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCCCCCCCCC NVPDVCKSIDPKSIPQGTIYLTQVGKTPNVLDESGEPFTTGPLIDQNGLYTRYEILTNET CCHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCEECCCCCEEEEEEEECCE MFNFILNNNLYSKKGQKQFNADVDFTASDSKTGQVGSIMLKASWIKMGGKFDATNYYTTY EEEEEECCCCCCCCCCHHCCCCEEEECCCCCCCCCEEEEEEEEEEECCCEECCCCEEEEE ALVYNNPEEQHGVKPACALEQVGLVGFHIAHKTTGEPQWIWSTFEHVANAPTQGELASLS EEEECCCHHHHCCCHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEE AYNFYDAKCTDCKVNEPPARPWDPANPHTKPTQVERVIPITADAKALNASYHAALDAVVP ECEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHCCHHHHHHHEECC GSVWMNYELVSTQWPTDAKNPTDPTGVPAPYFLANTTLETYIQGSVKQTSSSCMACHNNA CCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCHHHCCCHHHEECCCC ATTNGNFADFTYLLQRAQ CCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA