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The map label for this gene is yscR [H]

Identifier: 126174198

GI number: 126174198

Start: 2288638

End: 2289288

Strand: Direct

Name: yscR [H]

Synonym: Sbal_1974

Alternate gene names: 126174198

Gene position: 2288638-2289288 (Clockwise)

Preceding gene: 126174197

Following gene: 126174199

Centisome position: 44.64

GC content: 45.16

Gene sequence:

>651_bases
ATGACCTTACTCGACCACCCAGTCCAATTGATCATTATGTTGTTTTGCCTGTCACTGCTGCCGCTGTTTGCTGTGATGGG
CACCTCATTCTTGAAATTGGCAATCGTGTTCTCTATGTTACGTAACGCTCTAGGGATCCAGCAGATCCCACCCAATATGG
CAATTTACGGCCTCGCATTAATCCTCACCCTATTCACCATGGCACCTGTGGGGATGGCAATCAATGACAATCTCAAAGCC
ACTCCCATAGTGTTCGATGCGCCCAATGTTTTTGAGCAAATCAACACTGAAGCTATCGCTCCTTACCGCGCGTTTCTCGA
CAAAAACACCAGCAACACTCAGATTGAATTCTTCGCCAATATAGGCCACAAGGTCTGGCCCGAAAAATACCAGCAAGTGC
TGACCAAAGACTCACTGTTAGTCATGGTGCCAGCCTTCACTATGAGTCAGCTCATAGAGGCATTTAAGATAGGTTTACTC
ATCTATCTTCCCTTTGTTGCAATTGATCTTATCGTCTCCAATATTTTACTGGCAATGGGCATGATGATGGTCTCGCCCAT
GACTATAGCGCTACCTTTCAAGTTGTTGATTTTTATCTTGATGGGTGGATGGGAAAAACTGATCAGCCAACTAATGATGT
CATTCTCATGA

Upstream 100 bases:

>100_bases
TCACTGATGTTAGCGGTTTTAAGTCAGCTAAGGTCTTCACCTGATACTGGTTAATCGCAAAGCGCGCCATGATGGAACCC
TAGCCACAAAGGAGGTTTCC

Downstream 100 bases:

>100_bases
GCGAAACTATCATTGTACATTTCACCTCAGAACTACTGTGGATGGTGTTACTGCTGTCGCTACCTGTCGTTATCGTGGCT
TCAGTTGTCGGAGTTTTGGT

Product: type III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MTLLDHPVQLIIMLFCLSLLPLFAVMGTSFLKLAIVFSMLRNALGIQQIPPNMAIYGLALILTLFTMAPVGMAINDNLKA
TPIVFDAPNVFEQINTEAIAPYRAFLDKNTSNTQIEFFANIGHKVWPEKYQQVLTKDSLLVMVPAFTMSQLIEAFKIGLL
IYLPFVAIDLIVSNILLAMGMMMVSPMTIALPFKLLIFILMGGWEKLISQLMMSFS

Sequences:

>Translated_216_residues
MTLLDHPVQLIIMLFCLSLLPLFAVMGTSFLKLAIVFSMLRNALGIQQIPPNMAIYGLALILTLFTMAPVGMAINDNLKA
TPIVFDAPNVFEQINTEAIAPYRAFLDKNTSNTQIEFFANIGHKVWPEKYQQVLTKDSLLVMVPAFTMSQLIEAFKIGLL
IYLPFVAIDLIVSNILLAMGMMMVSPMTIALPFKLLIFILMGGWEKLISQLMMSFS
>Mature_215_residues
TLLDHPVQLIIMLFCLSLLPLFAVMGTSFLKLAIVFSMLRNALGIQQIPPNMAIYGLALILTLFTMAPVGMAINDNLKAT
PIVFDAPNVFEQINTEAIAPYRAFLDKNTSNTQIEFFANIGHKVWPEKYQQVLTKDSLLVMVPAFTMSQLIEAFKIGLLI
YLPFVAIDLIVSNILLAMGMMMVSPMTIALPFKLLIFILMGGWEKLISQLMMSFS

Specific function: Plays A Role In The Flagellum-Specific Transport System. [C]

COG id: COG4790

COG function: function code U; Type III secretory pathway, component EscR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=219, Percent_Identity=39.2694063926941, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005838
- InterPro:   IPR005773 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 24096; Mature: 23965

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
7.9 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
7.4 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLDHPVQLIIMLFCLSLLPLFAVMGTSFLKLAIVFSMLRNALGIQQIPPNMAIYGLAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
ILTLFTMAPVGMAINDNLKATPIVFDAPNVFEQINTEAIAPYRAFLDKNTSNTQIEFFAN
HHHHHHHHHCCCEECCCCCCCCEEECCHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHH
IGHKVWPEKYQQVLTKDSLLVMVPAFTMSQLIEAFKIGLLIYLPFVAIDLIVSNILLAMG
CCCCCCHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MMMVSPMTIALPFKLLIFILMGGWEKLISQLMMSFS
HHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TLLDHPVQLIIMLFCLSLLPLFAVMGTSFLKLAIVFSMLRNALGIQQIPPNMAIYGLAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
ILTLFTMAPVGMAINDNLKATPIVFDAPNVFEQINTEAIAPYRAFLDKNTSNTQIEFFAN
HHHHHHHHHCCCEECCCCCCCCEEECCHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHH
IGHKVWPEKYQQVLTKDSLLVMVPAFTMSQLIEAFKIGLLIYLPFVAIDLIVSNILLAMG
CCCCCCHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MMMVSPMTIALPFKLLIFILMGGWEKLISQLMMSFS
HHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]