Definition | Shewanella baltica OS155 chromosome, complete genome. |
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Accession | NC_009052 |
Length | 5,127,376 |
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The map label for this gene is 126174197
Identifier: 126174197
GI number: 126174197
Start: 2287600
End: 2288520
Strand: Direct
Name: 126174197
Synonym: Sbal_1973
Alternate gene names: NA
Gene position: 2287600-2288520 (Clockwise)
Preceding gene: 126174196
Following gene: 126174198
Centisome position: 44.62
GC content: 50.16
Gene sequence:
>921_bases ATGAACATCAATACATTGATCAATGCCCGTCAAGTCATAGGCCGTGGCCTAGCCCAACAAGCTTGCCGGATCGAACTGAT GCGTATCGGGGGGGATGGAGTATTCTGGCAGAGACGCAATGCACCATTAGGAGTAGGTCTGTGGTGTTCTAAACAGGATT GGCAACAGTGGGTGACCACACTTACTGGCGTAACTTCTCCGTCTGAGGTTGCCAGTGATTTATTACCTTGTATCAGTGCG GTAGCATTTGAAGCCGCGGGTGAATGGTTAGTCGATGTCCTCGAAGAAATCCCTAAGCCATTTGGATTGGTGCCAGATAT TTATCCCGTGTTAACGCTTCAAACGGCGCAATTGGGACAAGGCAACGCAGAGTGTGCCAGTCAATTAGCGTGTGTCTTAG TTGATTGGTCGCAAGATGACTGGCAGAGCCAAGTCGAGTCATGGTCAGCATTTTCAGGTAAAACGGCTGATGTTAGTTTG AGTTTAGTGGCCGGTTTTGTGCCCCAATTAACGCCCATACCAGACTTACCTGAGATAGGAGGGGGGGTATGGCTCGATGG TGATGTGCAAATCGAGCAGGGTGAAGCCCTATTATGGGCAGATGGGCCTTTGGCTAAGATCAAGTTTATTACCCCCATTG ATGGTCCCCAAGTCCAACTCGAAATCGTGTCTTTATTGCCTAAGATGGACGCTATTCAGTCCCCTTTGATCGCCGAGATC GGTCGAGTGAGTCTTTCTCTGGCTAAGCTCGGGGCTATGATGGCTGGTGACAAGCTAACGCTGGCCGTCACCCTGAATAG TCAAATGATTTTAGGGCGGCTTAGTTCTCAGTACGGTCAAGAGCAGCACCAAACCCTCGCGAGTATCCATCTCCTGCGCG GAGAGTCGGGATTGCTCGCGCAAATTGAGGCTCTAGTTTAA
Upstream 100 bases:
>100_bases GCGAGACTCTTACCTAAACTCAACGAGCAACTACAAGGGCGACGCTTCGCCATTCATTTAGATCTCATGCCAACCAACAC AGCAGAGACGAGGTAGACGA
Downstream 100 bases:
>100_bases AGGTAACGGTATTGCATTCACTGATGTTAGCGGTTTTAAGTCAGCTAAGGTCTTCACCTGATACTGGTTAATCGCAAAGC GCGCCATGATGGAACCCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MNINTLINARQVIGRGLAQQACRIELMRIGGDGVFWQRRNAPLGVGLWCSKQDWQQWVTTLTGVTSPSEVASDLLPCISA VAFEAAGEWLVDVLEEIPKPFGLVPDIYPVLTLQTAQLGQGNAECASQLACVLVDWSQDDWQSQVESWSAFSGKTADVSL SLVAGFVPQLTPIPDLPEIGGGVWLDGDVQIEQGEALLWADGPLAKIKFITPIDGPQVQLEIVSLLPKMDAIQSPLIAEI GRVSLSLAKLGAMMAGDKLTLAVTLNSQMILGRLSSQYGQEQHQTLASIHLLRGESGLLAQIEALV
Sequences:
>Translated_306_residues MNINTLINARQVIGRGLAQQACRIELMRIGGDGVFWQRRNAPLGVGLWCSKQDWQQWVTTLTGVTSPSEVASDLLPCISA VAFEAAGEWLVDVLEEIPKPFGLVPDIYPVLTLQTAQLGQGNAECASQLACVLVDWSQDDWQSQVESWSAFSGKTADVSL SLVAGFVPQLTPIPDLPEIGGGVWLDGDVQIEQGEALLWADGPLAKIKFITPIDGPQVQLEIVSLLPKMDAIQSPLIAEI GRVSLSLAKLGAMMAGDKLTLAVTLNSQMILGRLSSQYGQEQHQTLASIHLLRGESGLLAQIEALV >Mature_306_residues MNINTLINARQVIGRGLAQQACRIELMRIGGDGVFWQRRNAPLGVGLWCSKQDWQQWVTTLTGVTSPSEVASDLLPCISA VAFEAAGEWLVDVLEEIPKPFGLVPDIYPVLTLQTAQLGQGNAECASQLACVLVDWSQDDWQSQVESWSAFSGKTADVSL SLVAGFVPQLTPIPDLPEIGGGVWLDGDVQIEQGEALLWADGPLAKIKFITPIDGPQVQLEIVSLLPKMDAIQSPLIAEI GRVSLSLAKLGAMMAGDKLTLAVTLNSQMILGRLSSQYGQEQHQTLASIHLLRGESGLLAQIEALV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32901; Mature: 32901
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNINTLINARQVIGRGLAQQACRIELMRIGGDGVFWQRRNAPLGVGLWCSKQDWQQWVTT CCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEECCCCEEEEEEECHHHHHHHHHH LTGVTSPSEVASDLLPCISAVAFEAAGEWLVDVLEEIPKPFGLVPDIYPVLTLQTAQLGQ HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEEHHHCCC GNAECASQLACVLVDWSQDDWQSQVESWSAFSGKTADVSLSLVAGFVPQLTPIPDLPEIG CCHHHHHCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC GGVWLDGDVQIEQGEALLWADGPLAKIKFITPIDGPQVQLEIVSLLPKMDAIQSPLIAEI CCEEECCCEEEECCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHH GRVSLSLAKLGAMMAGDKLTLAVTLNSQMILGRLSSQYGQEQHQTLASIHLLRGESGLLA HHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHH QIEALV HHHHCC >Mature Secondary Structure MNINTLINARQVIGRGLAQQACRIELMRIGGDGVFWQRRNAPLGVGLWCSKQDWQQWVTT CCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEECCCCEEEEEEECHHHHHHHHHH LTGVTSPSEVASDLLPCISAVAFEAAGEWLVDVLEEIPKPFGLVPDIYPVLTLQTAQLGQ HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEEHHHCCC GNAECASQLACVLVDWSQDDWQSQVESWSAFSGKTADVSLSLVAGFVPQLTPIPDLPEIG CCHHHHHCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC GGVWLDGDVQIEQGEALLWADGPLAKIKFITPIDGPQVQLEIVSLLPKMDAIQSPLIAEI CCEEECCCEEEECCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHH GRVSLSLAKLGAMMAGDKLTLAVTLNSQMILGRLSSQYGQEQHQTLASIHLLRGESGLLA HHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHH QIEALV HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA