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The map label for this gene is ssaV [H]

Identifier: 126174193

GI number: 126174193

Start: 2283337

End: 2285394

Strand: Direct

Name: ssaV [H]

Synonym: Sbal_1969

Alternate gene names: 126174193

Gene position: 2283337-2285394 (Clockwise)

Preceding gene: 126174192

Following gene: 126174194

Centisome position: 44.53

GC content: 48.06

Gene sequence:

>2058_bases
ATGAACCTCATCAGTCGTTGGTTAAGTAAAGCCGCAGGGCGTCACGATATCATCTTAAGTGCCATGTTAATGGTAGCCGT
ATTTATGATGATCTTGCCTCTACCGACACCTTTAGTCGATGTTTTAATTGCCTTAAACCTCGGCTTGTCCATAGTGTTAT
TGATGATCGCCATTTACATCCGTGACCCTTTAGAGTTCTCAGTCTTTCCATCCCTACTACTGATCACAACCTTGTACCGT
CTGGCACTCACTATCAGCACCAGTCGTTTGATTTTACTGCAGCATGATGCAGGGGATATCGTATATACCTTCGGTAACTT
CGTCGTCGGCGGCAATTTAGCGGTCGGAATTATTATCTTTGCTATCATCACCATAGTGCAGTTTATCGTGATTACTAAGG
GTTCCGAGCGGGTGGCGGAGGTGAGTGCACGTTTTTCTCTCGATGGAATGCCAGGTAAGCAAATGAGTATTGATGGTGAC
ATGCGTGCTGGCATCATTGACGCTAAAGAGGCAAAACGCCAACGTGCGCAAGTTCAGAAAGAAAGTCAGCTCTATGGCGC
CATGGACGGCGCGATGAAGTTTGTCAAAGGCGATGCCATCGCCAGCATTATTGTCATTTTAACCAATATCATTGGTGGTA
TCGCTGTCGGTGTCATGCAGCACAATATGTCGGCTGCCGAAGCATTAAATACCTATGCAGTCTTATCTGTCGGGGATGGT
TTGATAGCCCAAATACCTTCGCTACTGATTTCAGTCACCGCAGGCTTAATCGTGACCCGAGTGCCAGGAGAGCAGAGACA
GAACTTAGCCAACGAATTAGTGATGCAAGTAGGACGTCAACCTGCATCATTGCAAATGGCGGGGATCGTGATGTTCATCT
TTGCCTTAATCCCAGGTTTCCCAATTTTAGTCTTCGGCACACTCGGTTCGGCCGTCTTAGGGGCTTCATGGTGGTTGACG
CGTCAGCAAAAACGAGCGAGTGCTCAAGGGGATGAGAGCCATTTCACCGAAGCAGGTAAAAGTGAGATGACCAATGTCGA
CAATATGGCGCCGGGAGCTGTACCGCTGATTTTATATCTTGGTGCCGATGTGCCTATCAATGGGGTTAAAGAAGCACTGC
AAAAACTGCGTTGGCAATGGTTTGAGCAATTGGGCGTGCCATTACCGGAAATACAATTACAGATAGCTAAGAAAGGCACC
CTAGGCCGCTGTGATGTACTTTTGTACCAAGAGCCCGTATTGCAACTGCAATTAGCACCACAGGAAGTCCTGTTGATTGA
CCCCATCGCAACGATTCCATGCCGTGTCGAGTCCATCCCTTTTAGTAATCAAAGATTGCATTGGATCAAAGGTAATGCGC
TTGAGCAGGCGGAGGCCCAAGGTTTAGCGGTTTGCCGTGATGAGCAAATTCCTGCTTATGTGATGGGTAAAGTGATCGAC
CGCTATGCGGGGGAGTTTATCGGCGTACAAGAAACCCGTTATTTAATGGATGCCATGGAGGCTCGCTACGGTGAGCTAGT
CAAAGAACTTCAACGACTGTTGTCTGTGGGGAAGGTCGCCGAGATCCTACAACGCTTAGTCGAAGAGGGGATTTCAGTGC
GCGATCTACGGACTATTTTTGAAACCTTAGTCGAATGGGTACCAAAGGAGAAAGACATCATCATGTTAACTGAGTATGTG
CGGATTGCGCTTCGCCGCCATATTCGCCGCAAGTTTGCGACCCCACAAGGTTGGATTGCTGTGCTTATGGTCGGAGAAGG
AATTGAAAATGTGATCCGTGAATCGATACGACAATCGACAGCCGGCTCTTATTCAGCCTTAGATATGGCGCAAACTCAGC
AAATATTAACCTGCATTCAAGAACAGCTGCCACCGGAGCAAACCTGTGTACTGCTGACTTCGCTCGATGTGCGCCGTTAC
CTGCGAAAAATCGTAGAACGCGAGTTATTTAGCACACCCGTTTTGTCGTTTCAGGAATTAGGCGACGATGCAGAAATAAA
AGTCATAGGCCAAGTGGACTTAGTGGGTGACATGCTCGATGCCGCACTGGCGAGCTAA

Upstream 100 bases:

>100_bases
TCAGTTGCCTCTGTCCATCGACACACCAGGGTCATGATTGGTATCACTTGTATCAGCTGCAACAAAAATTCCTAAATCGT
ATGCTCATAGGAGGTCAATG

Downstream 100 bases:

>100_bases
TGGAGGCGATAGATGAAATTACCCAGTAAAGAAACACTTTATGCACAACTCGAACCTCGCTTATTCGCTGCTCAGAGTCT
GTTGCCTGTGCAATCGGTTC

Product: secretion system apparatus protein SsaV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 685; Mature: 685

Protein sequence:

>685_residues
MNLISRWLSKAAGRHDIILSAMLMVAVFMMILPLPTPLVDVLIALNLGLSIVLLMIAIYIRDPLEFSVFPSLLLITTLYR
LALTISTSRLILLQHDAGDIVYTFGNFVVGGNLAVGIIIFAIITIVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGD
MRAGIIDAKEAKRQRAQVQKESQLYGAMDGAMKFVKGDAIASIIVILTNIIGGIAVGVMQHNMSAAEALNTYAVLSVGDG
LIAQIPSLLISVTAGLIVTRVPGEQRQNLANELVMQVGRQPASLQMAGIVMFIFALIPGFPILVFGTLGSAVLGASWWLT
RQQKRASAQGDESHFTEAGKSEMTNVDNMAPGAVPLILYLGADVPINGVKEALQKLRWQWFEQLGVPLPEIQLQIAKKGT
LGRCDVLLYQEPVLQLQLAPQEVLLIDPIATIPCRVESIPFSNQRLHWIKGNALEQAEAQGLAVCRDEQIPAYVMGKVID
RYAGEFIGVQETRYLMDAMEARYGELVKELQRLLSVGKVAEILQRLVEEGISVRDLRTIFETLVEWVPKEKDIIMLTEYV
RIALRRHIRRKFATPQGWIAVLMVGEGIENVIRESIRQSTAGSYSALDMAQTQQILTCIQEQLPPEQTCVLLTSLDVRRY
LRKIVERELFSTPVLSFQELGDDAEIKVIGQVDLVGDMLDAALAS

Sequences:

>Translated_685_residues
MNLISRWLSKAAGRHDIILSAMLMVAVFMMILPLPTPLVDVLIALNLGLSIVLLMIAIYIRDPLEFSVFPSLLLITTLYR
LALTISTSRLILLQHDAGDIVYTFGNFVVGGNLAVGIIIFAIITIVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGD
MRAGIIDAKEAKRQRAQVQKESQLYGAMDGAMKFVKGDAIASIIVILTNIIGGIAVGVMQHNMSAAEALNTYAVLSVGDG
LIAQIPSLLISVTAGLIVTRVPGEQRQNLANELVMQVGRQPASLQMAGIVMFIFALIPGFPILVFGTLGSAVLGASWWLT
RQQKRASAQGDESHFTEAGKSEMTNVDNMAPGAVPLILYLGADVPINGVKEALQKLRWQWFEQLGVPLPEIQLQIAKKGT
LGRCDVLLYQEPVLQLQLAPQEVLLIDPIATIPCRVESIPFSNQRLHWIKGNALEQAEAQGLAVCRDEQIPAYVMGKVID
RYAGEFIGVQETRYLMDAMEARYGELVKELQRLLSVGKVAEILQRLVEEGISVRDLRTIFETLVEWVPKEKDIIMLTEYV
RIALRRHIRRKFATPQGWIAVLMVGEGIENVIRESIRQSTAGSYSALDMAQTQQILTCIQEQLPPEQTCVLLTSLDVRRY
LRKIVERELFSTPVLSFQELGDDAEIKVIGQVDLVGDMLDAALAS
>Mature_685_residues
MNLISRWLSKAAGRHDIILSAMLMVAVFMMILPLPTPLVDVLIALNLGLSIVLLMIAIYIRDPLEFSVFPSLLLITTLYR
LALTISTSRLILLQHDAGDIVYTFGNFVVGGNLAVGIIIFAIITIVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGD
MRAGIIDAKEAKRQRAQVQKESQLYGAMDGAMKFVKGDAIASIIVILTNIIGGIAVGVMQHNMSAAEALNTYAVLSVGDG
LIAQIPSLLISVTAGLIVTRVPGEQRQNLANELVMQVGRQPASLQMAGIVMFIFALIPGFPILVFGTLGSAVLGASWWLT
RQQKRASAQGDESHFTEAGKSEMTNVDNMAPGAVPLILYLGADVPINGVKEALQKLRWQWFEQLGVPLPEIQLQIAKKGT
LGRCDVLLYQEPVLQLQLAPQEVLLIDPIATIPCRVESIPFSNQRLHWIKGNALEQAEAQGLAVCRDEQIPAYVMGKVID
RYAGEFIGVQETRYLMDAMEARYGELVKELQRLLSVGKVAEILQRLVEEGISVRDLRTIFETLVEWVPKEKDIIMLTEYV
RIALRRHIRRKFATPQGWIAVLMVGEGIENVIRESIRQSTAGSYSALDMAQTQQILTCIQEQLPPEQTCVLLTSLDVRRY
LRKIVERELFSTPVLSFQELGDDAEIKVIGQVDLVGDMLDAALAS

Specific function: Required For Formation Of The Rod Structure Of The Flagellar Apparatus. Together With Flii And Flih, May Constitute The Export Apparatus Of Flagellin. [C]

COG id: COG4789

COG function: function code U; Type III secretory pathway, component EscV

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family [H]

Homologues:

Organism=Escherichia coli, GI1788187, Length=676, Percent_Identity=34.7633136094675, Blast_Score=369, Evalue=1e-103,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001712
- InterPro:   IPR006302 [H]

Pfam domain/function: PF00771 FHIPEP [H]

EC number: NA

Molecular weight: Translated: 75392; Mature: 75392

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS00994 FHIPEP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLISRWLSKAAGRHDIILSAMLMVAVFMMILPLPTPLVDVLIALNLGLSIVLLMIAIYI
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RDPLEFSVFPSLLLITTLYRLALTISTSRLILLQHDAGDIVYTFGNFVVGGNLAVGIIIF
CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCEEECCHHHHHHHHH
AIITIVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGIIDAKEAKRQRAQVQK
HHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH
ESQLYGAMDGAMKFVKGDAIASIIVILTNIIGGIAVGVMQHNMSAAEALNTYAVLSVGDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHEEEECCCC
LIAQIPSLLISVTAGLIVTRVPGEQRQNLANELVMQVGRQPASLQMAGIVMFIFALIPGF
HHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
PILVFGTLGSAVLGASWWLTRQQKRASAQGDESHFTEAGKSEMTNVDNMAPGAVPLILYL
CEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHCCCCCCCCCHHHHHHEE
GADVPINGVKEALQKLRWQWFEQLGVPLPEIQLQIAKKGTLGRCDVLLYQEPVLQLQLAP
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCEEEEECCCCCEEEECC
QEVLLIDPIATIPCRVESIPFSNQRLHWIKGNALEQAEAQGLAVCRDEQIPAYVMGKVID
CCEEEECCCCCCCCEEECCCCCCCEEEEECCCCHHHHHHCCCEEECCCCCCHHHHHHHHH
RYAGEFIGVQETRYLMDAMEARYGELVKELQRLLSVGKVAEILQRLVEEGISVRDLRTIF
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ETLVEWVPKEKDIIMLTEYVRIALRRHIRRKFATPQGWIAVLMVGEGIENVIRESIRQST
HHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHC
AGSYSALDMAQTQQILTCIQEQLPPEQTCVLLTSLDVRRYLRKIVERELFSTPVLSFQEL
CCCCHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHC
GDDAEIKVIGQVDLVGDMLDAALAS
CCCCCEEEEEEHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLISRWLSKAAGRHDIILSAMLMVAVFMMILPLPTPLVDVLIALNLGLSIVLLMIAIYI
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RDPLEFSVFPSLLLITTLYRLALTISTSRLILLQHDAGDIVYTFGNFVVGGNLAVGIIIF
CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCEEECCHHHHHHHHH
AIITIVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGIIDAKEAKRQRAQVQK
HHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH
ESQLYGAMDGAMKFVKGDAIASIIVILTNIIGGIAVGVMQHNMSAAEALNTYAVLSVGDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHEEEECCCC
LIAQIPSLLISVTAGLIVTRVPGEQRQNLANELVMQVGRQPASLQMAGIVMFIFALIPGF
HHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
PILVFGTLGSAVLGASWWLTRQQKRASAQGDESHFTEAGKSEMTNVDNMAPGAVPLILYL
CEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHCCCCCCCCCHHHHHHEE
GADVPINGVKEALQKLRWQWFEQLGVPLPEIQLQIAKKGTLGRCDVLLYQEPVLQLQLAP
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCEEEEECCCCCEEEECC
QEVLLIDPIATIPCRVESIPFSNQRLHWIKGNALEQAEAQGLAVCRDEQIPAYVMGKVID
CCEEEECCCCCCCCEEECCCCCCCEEEEECCCCHHHHHHCCCEEECCCCCCHHHHHHHHH
RYAGEFIGVQETRYLMDAMEARYGELVKELQRLLSVGKVAEILQRLVEEGISVRDLRTIF
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ETLVEWVPKEKDIIMLTEYVRIALRRHIRRKFATPQGWIAVLMVGEGIENVIRESIRQST
HHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHC
AGSYSALDMAQTQQILTCIQEQLPPEQTCVLLTSLDVRRYLRKIVERELFSTPVLSFQEL
CCCCHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHC
GDDAEIKVIGQVDLVGDMLDAALAS
CCCCCEEEEEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609 [H]