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The map label for this gene is yfmJ [H]

Identifier: 126173894

GI number: 126173894

Start: 1941864

End: 1942877

Strand: Reverse

Name: yfmJ [H]

Synonym: Sbal_1662

Alternate gene names: 126173894

Gene position: 1942877-1941864 (Counterclockwise)

Preceding gene: 126173902

Following gene: 126173892

Centisome position: 37.89

GC content: 49.01

Gene sequence:

>1014_bases
ATGAATAGCACTATTACCGAAACCCGTGAAATCCATTTAGCCAGTCGCCCTGAAGGCATGCCTACGGCTGAGAATTTTGC
TTTAGTAAATCAATCCTTAGCACCGCTCGCCGATGGCCAAGTGTTGATTAAAAACCTGTGGATGTCGGTCGACCCTTATA
TGCGCGGCCGCATGGTAGATCGTAAGAGTTATGTTCCGCCCTTCGCCTTAAATCAAGTCTTAGAAGGCGGCGCGATTGGT
GAAGTTATCGCGTCTAAAAACAGTGATTTCCCAGTGGGCACTAAAGTCAGCAGCATGTTAGGTTGGCGCGAACACGCCGT
CACCGACACGGCTGGACTGACCGCTCTGCCGCAAACCGAATTAGACAGTTCACATTTCCTCGGCGTGCTTGGTATGCCGG
GCATGACAGCGTGGACGGGACTGACTCGCATCACAGATTTAAAAGCGGGTGAAACCCTGTTTGTTTCTGCCGCATCAGGC
GCCGTCGGCAGTGTTGCTTGCCAGATTGGTAAACTGATGGGTGCTCGCGTAATCGCCTCTGTGGGTTCAGACGAAAAAGC
GGAATTGCTGCGAAGCTATGGTGTTGATGCCATCATCAATTACAAAACCTGTGGCAATCTCACCCAAGCGCTCACAAAAG
CCGCGCCAGAAGGGATTGATGTGTACTTTGAAAACGTCGGTGGTGAGCATTTAGCCGCAGCGCTGAGCAATATGAAAGAT
CATGGTCGTATCGCCGTTTGCGGTATGATTTCGCAGTACAACGACACTGCGCCAACACCTGGTCCAGATAACTTGGCCCT
GATAGTGATGCGTAAACTTAAGTTAGAAGGTTTTATCGTATCCGAACATTGGGCGCATTATCCTGAGTTTGCCGTAAAAA
TGGCTCAATGGTTAGCTGAAGGTAAAGTCAAAGCTGAACAAACCATTTATCAAGGGCTTGAACAAGCACCTGATGCCTTT
ATCGGTCTGTTTGAAGGTAAGAATCGCGGTAAAATGTTGGTGAAATTAGCGTAA

Upstream 100 bases:

>100_bases
CCCATCGCATCTAGTTTGCGCGCAAAGTATTTGCATTGTGTTATGAAGCCACGTACAGTTGACGCAGTTAGTTTGTGCAC
AAACAAAAGGTTAATTTTCT

Downstream 100 bases:

>100_bases
CTCGCCATCAAAGCGACATAAATGCTCAGTTTTAGATAGCAAAAAGTCGGTATAACGCGAGTTGTACCGACTTTTTCTAT
TTGATAGTCAACTGTTTATC

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MNSTITETREIHLASRPEGMPTAENFALVNQSLAPLADGQVLIKNLWMSVDPYMRGRMVDRKSYVPPFALNQVLEGGAIG
EVIASKNSDFPVGTKVSSMLGWREHAVTDTAGLTALPQTELDSSHFLGVLGMPGMTAWTGLTRITDLKAGETLFVSAASG
AVGSVACQIGKLMGARVIASVGSDEKAELLRSYGVDAIINYKTCGNLTQALTKAAPEGIDVYFENVGGEHLAAALSNMKD
HGRIAVCGMISQYNDTAPTPGPDNLALIVMRKLKLEGFIVSEHWAHYPEFAVKMAQWLAEGKVKAEQTIYQGLEQAPDAF
IGLFEGKNRGKMLVKLA

Sequences:

>Translated_337_residues
MNSTITETREIHLASRPEGMPTAENFALVNQSLAPLADGQVLIKNLWMSVDPYMRGRMVDRKSYVPPFALNQVLEGGAIG
EVIASKNSDFPVGTKVSSMLGWREHAVTDTAGLTALPQTELDSSHFLGVLGMPGMTAWTGLTRITDLKAGETLFVSAASG
AVGSVACQIGKLMGARVIASVGSDEKAELLRSYGVDAIINYKTCGNLTQALTKAAPEGIDVYFENVGGEHLAAALSNMKD
HGRIAVCGMISQYNDTAPTPGPDNLALIVMRKLKLEGFIVSEHWAHYPEFAVKMAQWLAEGKVKAEQTIYQGLEQAPDAF
IGLFEGKNRGKMLVKLA
>Mature_337_residues
MNSTITETREIHLASRPEGMPTAENFALVNQSLAPLADGQVLIKNLWMSVDPYMRGRMVDRKSYVPPFALNQVLEGGAIG
EVIASKNSDFPVGTKVSSMLGWREHAVTDTAGLTALPQTELDSSHFLGVLGMPGMTAWTGLTRITDLKAGETLFVSAASG
AVGSVACQIGKLMGARVIASVGSDEKAELLRSYGVDAIINYKTCGNLTQALTKAAPEGIDVYFENVGGEHLAAALSNMKD
HGRIAVCGMISQYNDTAPTPGPDNLALIVMRKLKLEGFIVSEHWAHYPEFAVKMAQWLAEGKVKAEQTIYQGLEQAPDAF
IGLFEGKNRGKMLVKLA

Specific function: Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226059159, Length=340, Percent_Identity=40.2941176470588, Blast_Score=238, Evalue=5e-63,
Organism=Homo sapiens, GI226059133, Length=340, Percent_Identity=40.2941176470588, Blast_Score=238, Evalue=5e-63,
Organism=Homo sapiens, GI226246682, Length=344, Percent_Identity=37.7906976744186, Blast_Score=211, Evalue=6e-55,
Organism=Homo sapiens, GI226246680, Length=344, Percent_Identity=37.7906976744186, Blast_Score=211, Evalue=6e-55,
Organism=Homo sapiens, GI22748929, Length=344, Percent_Identity=37.7906976744186, Blast_Score=211, Evalue=6e-55,
Organism=Homo sapiens, GI226056130, Length=312, Percent_Identity=39.7435897435897, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI28557745, Length=334, Percent_Identity=29.6407185628743, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI194239674, Length=218, Percent_Identity=29.8165137614679, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI13236495, Length=218, Percent_Identity=29.8165137614679, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI194239676, Length=172, Percent_Identity=31.3953488372093, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI226510941, Length=343, Percent_Identity=40.8163265306122, Blast_Score=265, Evalue=2e-72,
Organism=Caenorhabditis elegans, GI133901710, Length=355, Percent_Identity=32.3943661971831, Blast_Score=172, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI133901712, Length=355, Percent_Identity=32.3943661971831, Blast_Score=172, Evalue=2e-43,
Organism=Saccharomyces cerevisiae, GI6323504, Length=337, Percent_Identity=27.5964391691395, Blast_Score=117, Evalue=4e-27,
Organism=Saccharomyces cerevisiae, GI6319520, Length=303, Percent_Identity=25.4125412541254, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36170; Mature: 36170

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSTITETREIHLASRPEGMPTAENFALVNQSLAPLADGQVLIKNLWMSVDPYMRGRMVD
CCCCCCCHHEEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHCEEEC
RKSYVPPFALNQVLEGGAIGEVIASKNSDFPVGTKVSSMLGWREHAVTDTAGLTALPQTE
HHCCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
LDSSHFLGVLGMPGMTAWTGLTRITDLKAGETLFVSAASGAVGSVACQIGKLMGARVIAS
CCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
VGSDEKAELLRSYGVDAIINYKTCGNLTQALTKAAPEGIDVYFENVGGEHLAAALSNMKD
CCCCHHHHHHHHCCCCEEEECHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCC
HGRIAVCGMISQYNDTAPTPGPDNLALIVMRKLKLEGFIVSEHWAHYPEFAVKMAQWLAE
CCCEEEEEEHHHCCCCCCCCCCCCCEEEEEHHHHHCCEEECHHHCCCHHHHHHHHHHHHH
GKVKAEQTIYQGLEQAPDAFIGLFEGKNRGKMLVKLA
CCCHHHHHHHHHHHHCCHHEEEEECCCCCCCEEEEEC
>Mature Secondary Structure
MNSTITETREIHLASRPEGMPTAENFALVNQSLAPLADGQVLIKNLWMSVDPYMRGRMVD
CCCCCCCHHEEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHCEEEC
RKSYVPPFALNQVLEGGAIGEVIASKNSDFPVGTKVSSMLGWREHAVTDTAGLTALPQTE
HHCCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
LDSSHFLGVLGMPGMTAWTGLTRITDLKAGETLFVSAASGAVGSVACQIGKLMGARVIAS
CCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
VGSDEKAELLRSYGVDAIINYKTCGNLTQALTKAAPEGIDVYFENVGGEHLAAALSNMKD
CCCCHHHHHHHHCCCCEEEECHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCC
HGRIAVCGMISQYNDTAPTPGPDNLALIVMRKLKLEGFIVSEHWAHYPEFAVKMAQWLAE
CCCEEEEEEHHHCCCCCCCCCCCCCEEEEEHHHHHCCEEECHHHCCCHHHHHHHHHHHHH
GKVKAEQTIYQGLEQAPDAFIGLFEGKNRGKMLVKLA
CCCHHHHHHHHHHHHCCHHEEEEECCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]