| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is srmB [H]
Identifier: 126173892
GI number: 126173892
Start: 1939201
End: 1940556
Strand: Reverse
Name: srmB [H]
Synonym: Sbal_1660
Alternate gene names: 126173892
Gene position: 1940556-1939201 (Counterclockwise)
Preceding gene: 126173894
Following gene: 126173891
Centisome position: 37.85
GC content: 47.27
Gene sequence:
>1356_bases TTGCAATTTACCGATTTTTCTCTGGACCAGCGTCTGCTTCAAAGCATAAAACATATGGGGATCACAGAACCCACCGCCAT CCAGGAACAAGCACTGCCTATCGCATTGGCAGGTAAAGATTTAATGGCGTCATCAAAAACGGGCTCAGGTAAAACCTTAG CGTTTTTGTTACCCGCATTGCAAAGAGTCATTTCTACCCGCTCACTGTCAAAACGCGATCCTAGAGTATTGATTTTATTA CCGACCCGCGAACTAGCACATCAAGTGTATAGTCAGCTTCGCCTGCTGGTCGCCAACACCCAATACAAAGCCATCAGCGT TCTGGGCGGTGAAAACTTTAACGACCAAGCGAAAGCCCTAGCGAAAGAACCGCATTTTATTGTCGCGACGCCGGGCCGTA TCGCCGATCATCTAGAGCAAAAACATCTATTTCTGAATGGGTTAGAGTTACTCGTGCTCGATGAAGCCGACCGCATGTTA GATTTAGGCTTTGCCCCGCAGTTGAAAGCCATCAACGATGCAGCCGATCATAAACGTCGTCAAACGCTGATGTTTTCTGC CACGTTAGATCATGACGAAATCAATGATATCGCGGCAACGCTGTTAAAAAATCCAGCGCACGTGGCGATTGGCGCGGCTC ACTCTGAGCATAACGACATTCACCAACGCATCTTCTTATGTGACCACTTAGACCATAAAGAAGCGTTATTAGCCCGTTTA CTTAAAGATGAAACACACAAGCAAGTGATCATCTTTACTGCGACGCGCCCAGATACAGAACGCTTAGCCGCTAAATTAAT TGAGCAAGGTTTTGCAACCGCCGCACTCAGCGGTGATTTAAAGCAAGCCGCACGAAACCAAATAATGGACCAATTTGCCC GTGGCCAACAACAAGTCCTAGTGACAACCGATGTTGCCTCTCGTGGTTTGGATTTGCTCAATGTGTCTTTGGTCGTCAAC TTCGACATGCCTAAATTTGCCGAAGAATACGTGCATCGTATCGGCCGTACTGGCCGTGCTGGCGCGAAAGGTGATGCGAT ATCGCTCGTCGGACCTAAAGATTGGGACAACTTTAAGAAAGTCCAAGTGTTCCTTAGAAAGACCTTTGAGATCAGTACGA TTCCAGGTCTAGAAGCTAAATTTAGTGGTCTAAAAAGCAAAGCCAAACAGACACCAGCAAAACGTGTTGCTAAAGCCGAG CTTGCTAAAGGTAAGAGTAAAAGAGCCAAAGCAGCCACACCGGCGCCTTCACGGGATAAGCGTTTTATCACGGGCGTGGA CATTGGCGATGCACCAATGCGTAAAAAGCCTGCTGCGGCGAAATTACTGCAAGACAATGATACAGAAGAAGTTTAG
Upstream 100 bases:
>100_bases TAAATCCATGCGTGAAGCAGAGATAATCACCGATGTGGATAGCTGAGTTAGGGCGATTAAGGCTATAATCTGCCCTTACT AAGATTTAGGGGATATACCT
Downstream 100 bases:
>100_bases AACAAATTAAAGCATATATGCCGGTGGATTTAACATCAGATTTTATTTCTGATACACAACACATTGGCTGATCGAATACT GGGAATTGACGCACTAAGCG
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MQFTDFSLDQRLLQSIKHMGITEPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQRVISTRSLSKRDPRVLILL PTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKALAKEPHFIVATPGRIADHLEQKHLFLNGLELLVLDEADRML DLGFAPQLKAINDAADHKRRQTLMFSATLDHDEINDIAATLLKNPAHVAIGAAHSEHNDIHQRIFLCDHLDHKEALLARL LKDETHKQVIIFTATRPDTERLAAKLIEQGFATAALSGDLKQAARNQIMDQFARGQQQVLVTTDVASRGLDLLNVSLVVN FDMPKFAEEYVHRIGRTGRAGAKGDAISLVGPKDWDNFKKVQVFLRKTFEISTIPGLEAKFSGLKSKAKQTPAKRVAKAE LAKGKSKRAKAATPAPSRDKRFITGVDIGDAPMRKKPAAAKLLQDNDTEEV
Sequences:
>Translated_451_residues MQFTDFSLDQRLLQSIKHMGITEPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQRVISTRSLSKRDPRVLILL PTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKALAKEPHFIVATPGRIADHLEQKHLFLNGLELLVLDEADRML DLGFAPQLKAINDAADHKRRQTLMFSATLDHDEINDIAATLLKNPAHVAIGAAHSEHNDIHQRIFLCDHLDHKEALLARL LKDETHKQVIIFTATRPDTERLAAKLIEQGFATAALSGDLKQAARNQIMDQFARGQQQVLVTTDVASRGLDLLNVSLVVN FDMPKFAEEYVHRIGRTGRAGAKGDAISLVGPKDWDNFKKVQVFLRKTFEISTIPGLEAKFSGLKSKAKQTPAKRVAKAE LAKGKSKRAKAATPAPSRDKRFITGVDIGDAPMRKKPAAAKLLQDNDTEEV >Mature_451_residues MQFTDFSLDQRLLQSIKHMGITEPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQRVISTRSLSKRDPRVLILL PTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKALAKEPHFIVATPGRIADHLEQKHLFLNGLELLVLDEADRML DLGFAPQLKAINDAADHKRRQTLMFSATLDHDEINDIAATLLKNPAHVAIGAAHSEHNDIHQRIFLCDHLDHKEALLARL LKDETHKQVIIFTATRPDTERLAAKLIEQGFATAALSGDLKQAARNQIMDQFARGQQQVLVTTDVASRGLDLLNVSLVVN FDMPKFAEEYVHRIGRTGRAGAKGDAISLVGPKDWDNFKKVQVFLRKTFEISTIPGLEAKFSGLKSKAKQTPAKRVAKAE LAKGKSKRAKAATPAPSRDKRFITGVDIGDAPMRKKPAAAKLLQDNDTEEV
Specific function: RNA-dependent ATPase activity. Probably interacts with 23S ribosomal RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI45446747, Length=360, Percent_Identity=38.3333333333333, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI45446743, Length=360, Percent_Identity=38.3333333333333, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI262118318, Length=358, Percent_Identity=37.9888268156425, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI262231852, Length=358, Percent_Identity=37.9888268156425, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI216548263, Length=358, Percent_Identity=37.9888268156425, Blast_Score=245, Evalue=5e-65, Organism=Homo sapiens, GI13518015, Length=358, Percent_Identity=37.9888268156425, Blast_Score=245, Evalue=6e-65, Organism=Homo sapiens, GI224593278, Length=366, Percent_Identity=39.344262295082, Blast_Score=244, Evalue=9e-65, Organism=Homo sapiens, GI4758138, Length=366, Percent_Identity=37.431693989071, Blast_Score=239, Evalue=4e-63, Organism=Homo sapiens, GI41327771, Length=382, Percent_Identity=36.6492146596859, Blast_Score=239, Evalue=4e-63, Organism=Homo sapiens, GI169881239, Length=370, Percent_Identity=37.5675675675676, Blast_Score=238, Evalue=7e-63, Organism=Homo sapiens, GI13514809, Length=370, Percent_Identity=37.5675675675676, Blast_Score=238, Evalue=7e-63, Organism=Homo sapiens, GI301171467, Length=369, Percent_Identity=37.6693766937669, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI87196351, Length=369, Percent_Identity=37.6693766937669, Blast_Score=236, Evalue=4e-62, Organism=Homo sapiens, GI301171475, Length=369, Percent_Identity=37.6693766937669, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI20149629, Length=422, Percent_Identity=34.3601895734597, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI148613856, Length=356, Percent_Identity=37.0786516853933, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI38201710, Length=356, Percent_Identity=37.0786516853933, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI222352149, Length=357, Percent_Identity=37.2549019607843, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI41327773, Length=352, Percent_Identity=36.0795454545455, Blast_Score=219, Evalue=3e-57, Organism=Homo sapiens, GI31542656, Length=379, Percent_Identity=36.6754617414248, Blast_Score=219, Evalue=3e-57, Organism=Homo sapiens, GI13514831, Length=358, Percent_Identity=35.7541899441341, Blast_Score=215, Evalue=5e-56, Organism=Homo sapiens, GI21071032, Length=360, Percent_Identity=35.8333333333333, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI55749865, Length=348, Percent_Identity=36.2068965517241, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI38327634, Length=383, Percent_Identity=35.2480417754569, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI7661920, Length=354, Percent_Identity=34.4632768361582, Blast_Score=205, Evalue=8e-53, Organism=Homo sapiens, GI188035877, Length=379, Percent_Identity=35.0923482849604, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI164664518, Length=376, Percent_Identity=33.7765957446808, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI41327776, Length=421, Percent_Identity=31.5914489311164, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI164419743, Length=374, Percent_Identity=34.4919786096257, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI51094101, Length=374, Percent_Identity=34.4919786096257, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI4503529, Length=372, Percent_Identity=33.6021505376344, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI83700235, Length=369, Percent_Identity=33.6043360433604, Blast_Score=188, Evalue=7e-48, Organism=Homo sapiens, GI13129006, Length=386, Percent_Identity=32.1243523316062, Blast_Score=185, Evalue=8e-47, Organism=Homo sapiens, GI38569503, Length=359, Percent_Identity=32.8690807799443, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI38569505, Length=359, Percent_Identity=32.8690807799443, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI9506931, Length=402, Percent_Identity=32.089552238806, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI164419732, Length=360, Percent_Identity=35, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI50659095, Length=377, Percent_Identity=33.6870026525199, Blast_Score=178, Evalue=9e-45, Organism=Homo sapiens, GI8922886, Length=389, Percent_Identity=33.6760925449871, Blast_Score=178, Evalue=9e-45, Organism=Homo sapiens, GI6005743, Length=389, Percent_Identity=32.9048843187661, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI17505907, Length=408, Percent_Identity=29.656862745098, Blast_Score=173, Evalue=4e-43, Organism=Homo sapiens, GI41327779, Length=370, Percent_Identity=31.6216216216216, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI21040371, Length=355, Percent_Identity=31.830985915493, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI62241022, Length=373, Percent_Identity=32.9758713136729, Blast_Score=165, Evalue=9e-41, Organism=Homo sapiens, GI4758112, Length=358, Percent_Identity=31.8435754189944, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI18375623, Length=358, Percent_Identity=31.8435754189944, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI154759257, Length=366, Percent_Identity=31.6939890710383, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI256223453, Length=364, Percent_Identity=28.8461538461538, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI62241024, Length=351, Percent_Identity=31.9088319088319, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI9966805, Length=348, Percent_Identity=31.0344827586207, Blast_Score=146, Evalue=5e-35, Organism=Homo sapiens, GI4826686, Length=333, Percent_Identity=29.1291291291291, Blast_Score=139, Evalue=7e-33, Organism=Homo sapiens, GI256773275, Length=416, Percent_Identity=28.8461538461538, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI20336298, Length=215, Percent_Identity=34.4186046511628, Blast_Score=123, Evalue=4e-28, Organism=Escherichia coli, GI1788930, Length=382, Percent_Identity=40.5759162303665, Blast_Score=264, Evalue=1e-71, Organism=Escherichia coli, GI1787016, Length=380, Percent_Identity=39.2105263157895, Blast_Score=258, Evalue=5e-70, Organism=Escherichia coli, GI87082221, Length=377, Percent_Identity=36.8700265251989, Blast_Score=233, Evalue=2e-62, Organism=Escherichia coli, GI1790214, Length=375, Percent_Identity=34.4, Blast_Score=231, Evalue=6e-62, Organism=Escherichia coli, GI1787605, Length=396, Percent_Identity=38.8888888888889, Blast_Score=220, Evalue=1e-58, Organism=Escherichia coli, GI48994977, Length=356, Percent_Identity=26.123595505618, Blast_Score=86, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17510307, Length=368, Percent_Identity=36.9565217391304, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17510309, Length=368, Percent_Identity=36.9565217391304, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17555296, Length=372, Percent_Identity=36.5591397849462, Blast_Score=239, Evalue=3e-63, Organism=Caenorhabditis elegans, GI71995514, Length=368, Percent_Identity=36.9565217391304, Blast_Score=239, Evalue=3e-63, Organism=Caenorhabditis elegans, GI32565321, Length=372, Percent_Identity=36.8279569892473, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI17552642, Length=357, Percent_Identity=39.4957983193277, Blast_Score=235, Evalue=5e-62, Organism=Caenorhabditis elegans, GI71995718, Length=371, Percent_Identity=39.3530997304582, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI17510559, Length=389, Percent_Identity=35.2185089974293, Blast_Score=224, Evalue=6e-59, Organism=Caenorhabditis elegans, GI115533224, Length=333, Percent_Identity=38.7387387387387, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI71987143, Length=375, Percent_Identity=33.6, Blast_Score=218, Evalue=6e-57, Organism=Caenorhabditis elegans, GI17507945, Length=364, Percent_Identity=36.5384615384615, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI86570094, Length=357, Percent_Identity=36.1344537815126, Blast_Score=211, Evalue=8e-55, Organism=Caenorhabditis elegans, GI71995724, Length=352, Percent_Identity=34.9431818181818, Blast_Score=208, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17507121, Length=352, Percent_Identity=34.9431818181818, Blast_Score=208, Evalue=6e-54, Organism=Caenorhabditis elegans, GI17507877, Length=369, Percent_Identity=35.230352303523, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI17507881, Length=373, Percent_Identity=34.0482573726542, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI115532548, Length=391, Percent_Identity=33.7595907928389, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17507879, Length=372, Percent_Identity=35.752688172043, Blast_Score=198, Evalue=5e-51, Organism=Caenorhabditis elegans, GI115532546, Length=371, Percent_Identity=33.9622641509434, Blast_Score=197, Evalue=7e-51, Organism=Caenorhabditis elegans, GI17509811, Length=359, Percent_Identity=32.3119777158774, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI71999646, Length=380, Percent_Identity=32.6315789473684, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI71999644, Length=380, Percent_Identity=32.6315789473684, Blast_Score=191, Evalue=6e-49, Organism=Caenorhabditis elegans, GI17508543, Length=382, Percent_Identity=31.413612565445, Blast_Score=191, Evalue=9e-49, Organism=Caenorhabditis elegans, GI17537549, Length=376, Percent_Identity=32.7127659574468, Blast_Score=188, Evalue=6e-48, Organism=Caenorhabditis elegans, GI17552114, Length=371, Percent_Identity=31.266846361186, Blast_Score=185, Evalue=4e-47, Organism=Caenorhabditis elegans, GI17505370, Length=391, Percent_Identity=32.9923273657289, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI71990816, Length=366, Percent_Identity=31.1475409836066, Blast_Score=171, Evalue=5e-43, Organism=Caenorhabditis elegans, GI17507641, Length=411, Percent_Identity=30.1703163017032, Blast_Score=171, Evalue=7e-43, Organism=Caenorhabditis elegans, GI32564046, Length=396, Percent_Identity=30.5555555555556, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI193208216, Length=382, Percent_Identity=33.5078534031414, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI25148203, Length=409, Percent_Identity=27.6283618581907, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=28.9398280802292, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI71982858, Length=357, Percent_Identity=29.9719887955182, Blast_Score=152, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17536099, Length=387, Percent_Identity=31.0077519379845, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI17536101, Length=387, Percent_Identity=31.0077519379845, Blast_Score=151, Evalue=7e-37, Organism=Caenorhabditis elegans, GI17536103, Length=387, Percent_Identity=31.0077519379845, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17556951, Length=339, Percent_Identity=29.7935103244838, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17553716, Length=355, Percent_Identity=29.0140845070423, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI71997889, Length=371, Percent_Identity=28.8409703504043, Blast_Score=129, Evalue=5e-30, Organism=Caenorhabditis elegans, GI25148291, Length=334, Percent_Identity=26.6467065868263, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17557982, Length=385, Percent_Identity=23.8961038961039, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71987152, Length=110, Percent_Identity=42.7272727272727, Blast_Score=99, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17565430, Length=384, Percent_Identity=22.65625, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI71982862, Length=191, Percent_Identity=30.3664921465969, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17566630, Length=337, Percent_Identity=21.9584569732938, Blast_Score=77, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6325138, Length=363, Percent_Identity=39.6694214876033, Blast_Score=247, Evalue=3e-66, Organism=Saccharomyces cerevisiae, GI6321856, Length=419, Percent_Identity=36.5155131264916, Blast_Score=245, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6324778, Length=362, Percent_Identity=39.5027624309392, Blast_Score=242, Evalue=9e-65, Organism=Saccharomyces cerevisiae, GI6324217, Length=352, Percent_Identity=37.7840909090909, Blast_Score=236, Evalue=8e-63, Organism=Saccharomyces cerevisiae, GI6321360, Length=355, Percent_Identity=38.8732394366197, Blast_Score=230, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6323021, Length=363, Percent_Identity=36.3636363636364, Blast_Score=218, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6320224, Length=383, Percent_Identity=33.1592689295039, Blast_Score=218, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6323947, Length=355, Percent_Identity=34.6478873239437, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6320041, Length=374, Percent_Identity=33.9572192513369, Blast_Score=197, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6321963, Length=377, Percent_Identity=36.0742705570292, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6322912, Length=369, Percent_Identity=33.0623306233062, Blast_Score=193, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6322323, Length=369, Percent_Identity=33.0623306233062, Blast_Score=193, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6320449, Length=356, Percent_Identity=35.9550561797753, Blast_Score=193, Evalue=6e-50, Organism=Saccharomyces cerevisiae, GI6322427, Length=368, Percent_Identity=32.8804347826087, Blast_Score=191, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6320173, Length=420, Percent_Identity=30.2380952380952, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6319714, Length=359, Percent_Identity=32.8690807799443, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6323306, Length=413, Percent_Identity=31.4769975786925, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6321267, Length=425, Percent_Identity=30.3529411764706, Blast_Score=173, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6324620, Length=367, Percent_Identity=34.0599455040872, Blast_Score=172, Evalue=7e-44, Organism=Saccharomyces cerevisiae, GI6320400, Length=369, Percent_Identity=28.9972899728997, Blast_Score=165, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6320119, Length=373, Percent_Identity=31.6353887399464, Blast_Score=165, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6319618, Length=419, Percent_Identity=26.7303102625298, Blast_Score=156, Evalue=5e-39, Organism=Saccharomyces cerevisiae, GI6321111, Length=367, Percent_Identity=29.1553133514986, Blast_Score=152, Evalue=7e-38, Organism=Saccharomyces cerevisiae, GI6324366, Length=358, Percent_Identity=28.7709497206704, Blast_Score=129, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6322876, Length=181, Percent_Identity=36.4640883977901, Blast_Score=106, Evalue=6e-24, Organism=Drosophila melanogaster, GI24662330, Length=356, Percent_Identity=39.8876404494382, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI28574962, Length=354, Percent_Identity=38.7005649717514, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI24584399, Length=354, Percent_Identity=38.135593220339, Blast_Score=242, Evalue=4e-64, Organism=Drosophila melanogaster, GI21356161, Length=376, Percent_Identity=36.7021276595745, Blast_Score=234, Evalue=6e-62, Organism=Drosophila melanogaster, GI24644479, Length=354, Percent_Identity=37.2881355932203, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI18857967, Length=386, Percent_Identity=34.9740932642487, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24644487, Length=354, Percent_Identity=37.2881355932203, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI45551833, Length=354, Percent_Identity=37.2881355932203, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24644485, Length=354, Percent_Identity=37.2881355932203, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI281361218, Length=354, Percent_Identity=37.2881355932203, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24644481, Length=354, Percent_Identity=37.2881355932203, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24644483, Length=354, Percent_Identity=37.2881355932203, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24585582, Length=405, Percent_Identity=34.8148148148148, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI17985987, Length=372, Percent_Identity=37.6344086021505, Blast_Score=228, Evalue=6e-60, Organism=Drosophila melanogaster, GI24584994, Length=381, Percent_Identity=35.1706036745407, Blast_Score=226, Evalue=2e-59, Organism=Drosophila melanogaster, GI21355075, Length=353, Percent_Identity=38.2436260623229, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24642151, Length=355, Percent_Identity=33.8028169014084, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI17977678, Length=360, Percent_Identity=36.1111111111111, Blast_Score=209, Evalue=4e-54, Organism=Drosophila melanogaster, GI24645031, Length=354, Percent_Identity=34.4632768361582, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI28575014, Length=388, Percent_Identity=35.0515463917526, Blast_Score=204, Evalue=7e-53, Organism=Drosophila melanogaster, GI28571808, Length=378, Percent_Identity=34.3915343915344, Blast_Score=199, Evalue=2e-51, Organism=Drosophila melanogaster, GI28571809, Length=378, Percent_Identity=34.3915343915344, Blast_Score=199, Evalue=2e-51, Organism=Drosophila melanogaster, GI281365720, Length=315, Percent_Identity=37.1428571428571, Blast_Score=198, Evalue=8e-51, Organism=Drosophila melanogaster, GI17136814, Length=361, Percent_Identity=35.1800554016621, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI24642822, Length=373, Percent_Identity=31.0991957104558, Blast_Score=192, Evalue=4e-49, Organism=Drosophila melanogaster, GI24583279, Length=380, Percent_Identity=32.8947368421053, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI24583281, Length=380, Percent_Identity=32.8947368421053, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24582080, Length=371, Percent_Identity=33.6927223719677, Blast_Score=188, Evalue=8e-48, Organism=Drosophila melanogaster, GI24582078, Length=371, Percent_Identity=33.6927223719677, Blast_Score=188, Evalue=8e-48, Organism=Drosophila melanogaster, GI17136248, Length=371, Percent_Identity=33.6927223719677, Blast_Score=188, Evalue=8e-48, Organism=Drosophila melanogaster, GI24582075, Length=371, Percent_Identity=33.6927223719677, Blast_Score=188, Evalue=8e-48, Organism=Drosophila melanogaster, GI24666101, Length=372, Percent_Identity=31.989247311828, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI21355559, Length=365, Percent_Identity=32.8767123287671, Blast_Score=162, Evalue=5e-40, Organism=Drosophila melanogaster, GI24581954, Length=357, Percent_Identity=31.6526610644258, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24581952, Length=357, Percent_Identity=31.6526610644258, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24581956, Length=357, Percent_Identity=31.6526610644258, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI17136666, Length=423, Percent_Identity=29.3144208037825, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI17647335, Length=387, Percent_Identity=29.7157622739018, Blast_Score=151, Evalue=8e-37, Organism=Drosophila melanogaster, GI24643725, Length=390, Percent_Identity=30, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI20130173, Length=459, Percent_Identity=27.0152505446623, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=29.1411042944785, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI19920478, Length=381, Percent_Identity=29.3963254593176, Blast_Score=135, Evalue=8e-32, Organism=Drosophila melanogaster, GI28571338, Length=210, Percent_Identity=36.1904761904762, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI18859659, Length=210, Percent_Identity=36.1904761904762, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI24640164, Length=350, Percent_Identity=27.1428571428571, Blast_Score=116, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 49714; Mature: 49714
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFTDFSLDQRLLQSIKHMGITEPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPAL CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCEEEEECCHHHCCCCCCCCCHHHHHHHHH QRVISTRSLSKRDPRVLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKAL HHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH AKEPHFIVATPGRIADHLEQKHLFLNGLELLVLDEADRMLDLGFAPQLKAINDAADHKRR HCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHH QTLMFSATLDHDEINDIAATLLKNPAHVAIGAAHSEHNDIHQRIFLCDHLDHKEALLARL HEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHH LKDETHKQVIIFTATRPDTERLAAKLIEQGFATAALSGDLKQAARNQIMDQFARGQQQVL HHCCCCCEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE VTTDVASRGLDLLNVSLVVNFDMPKFAEEYVHRIGRTGRAGAKGDAISLVGPKDWDNFKK EEECHHHCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHH VQVFLRKTFEISTIPGLEAKFSGLKSKAKQTPAKRVAKAELAKGKSKRAKAATPAPSRDK HHHHHHHHHEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC RFITGVDIGDAPMRKKPAAAKLLQDNDTEEV EEEEECCCCCCCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure MQFTDFSLDQRLLQSIKHMGITEPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPAL CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCEEEEECCHHHCCCCCCCCCHHHHHHHHH QRVISTRSLSKRDPRVLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKAL HHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH AKEPHFIVATPGRIADHLEQKHLFLNGLELLVLDEADRMLDLGFAPQLKAINDAADHKRR HCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHH QTLMFSATLDHDEINDIAATLLKNPAHVAIGAAHSEHNDIHQRIFLCDHLDHKEALLARL HEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHH LKDETHKQVIIFTATRPDTERLAAKLIEQGFATAALSGDLKQAARNQIMDQFARGQQQVL HHCCCCCEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE VTTDVASRGLDLLNVSLVVNFDMPKFAEEYVHRIGRTGRAGAKGDAISLVGPKDWDNFKK EEECHHHCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHH VQVFLRKTFEISTIPGLEAKFSGLKSKAKQTPAKRVAKAELAKGKSKRAKAATPAPSRDK HHHHHHHHHEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC RFITGVDIGDAPMRKKPAAAKLLQDNDTEEV EEEEECCCCCCCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]