| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173800
Identifier: 126173800
GI number: 126173800
Start: 1824878
End: 1825180
Strand: Reverse
Name: 126173800
Synonym: Sbal_1566
Alternate gene names: NA
Gene position: 1825180-1824878 (Counterclockwise)
Preceding gene: 126173801
Following gene: 126173799
Centisome position: 35.6
GC content: 45.87
Gene sequence:
>303_bases ATGATTTGGTTAATGATTTTCTCAATGGCAGCGGTTGTGTTTATTAGTCGTCATTTACTGCTCGAACCTAAATTACCGCT GCGATTAAGTAAGGTCACCCAAACTTTTTTAAGTTACTCAGCCCCTGCAGTACTGACCGCTATCTTCGCGCCCATAGTGT TTGTGCAAGAAGGCCAGCTCGATCTCAGTTTAGACAACAGCTATCTCATCTGCGCCGTGGTCGCGACGATACTCGCGCTC GTCACCCGTAACACCTTGCTGACCACAGTGTTGAGTATGGGACTGTTTTTCTTTATCCATTAA
Upstream 100 bases:
>100_bases AGGAAGCGGAACGCGCAGAACAATCCGCAACTGAGCTTGCAAGCACACAAACCCAAGCAGAAACTGGGACTAAGACAAAC ACAGCATCAGGAGAAAAAGC
Downstream 100 bases:
>100_bases GCAAACAACATTAAGTAAACAAAGAGTCAGTGCCCAGCAGCGGCACTGGCTCTTGCATCAATCACTTAACCGCCTCTACG ACTCTTTTACACAATCTCAT
Product: branched-chain amino acid transport
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MIWLMIFSMAAVVFISRHLLLEPKLPLRLSKVTQTFLSYSAPAVLTAIFAPIVFVQEGQLDLSLDNSYLICAVVATILAL VTRNTLLTTVLSMGLFFFIH
Sequences:
>Translated_100_residues MIWLMIFSMAAVVFISRHLLLEPKLPLRLSKVTQTFLSYSAPAVLTAIFAPIVFVQEGQLDLSLDNSYLICAVVATILAL VTRNTLLTTVLSMGLFFFIH >Mature_100_residues MIWLMIFSMAAVVFISRHLLLEPKLPLRLSKVTQTFLSYSAPAVLTAIFAPIVFVQEGQLDLSLDNSYLICAVVATILAL VTRNTLLTTVLSMGLFFFIH
Specific function: Unknown
COG id: COG4392
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11131; Mature: 11131
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWLMIFSMAAVVFISRHLLLEPKLPLRLSKVTQTFLSYSAPAVLTAIFAPIVFVQEGQL CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCE DLSLDNSYLICAVVATILALVTRNTLLTTVLSMGLFFFIH EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIWLMIFSMAAVVFISRHLLLEPKLPLRLSKVTQTFLSYSAPAVLTAIFAPIVFVQEGQL CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCE DLSLDNSYLICAVVATILALVTRNTLLTTVLSMGLFFFIH EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA