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The map label for this gene is 126173729

Identifier: 126173729

GI number: 126173729

Start: 1733365

End: 1734108

Strand: Reverse

Name: 126173729

Synonym: Sbal_1491

Alternate gene names: NA

Gene position: 1734108-1733365 (Counterclockwise)

Preceding gene: 126173732

Following gene: 126173721

Centisome position: 33.82

GC content: 47.58

Gene sequence:

>744_bases
ATGACCCAAGCAACTGCAATAATTGTGGGAGCTAGCTCACAATTAAGTCGTGAAATTGCAAAGCAATTGGCAGATCAACA
GGTTGAATTAGTCTTATTCGCCCAAGATCCAGAATCACTCCGCGATTTTGCCTTATCCTTGCCAACAAAAGTACAAGTAT
TTTCACTTCAAATTGAACAGCCTCAAGCCATTATCACTCAACTTGAATCCGTCTGGCAGAGTCTTGGCGGTGCGCACTTA
GTCTTAGTCAATACAGGCCTCAATAGTTATGATCCTGAGCTGCCTTGGCTGCCAGAGCAAGACATTATCGATGTCAATGT
GCGAGGTTTTGCCGCTATCTGCAATACGGCATTTAGACTATTTCGCGAGCAAGGTTATGGACAACTGGCGGCAATAAACT
CTATAGCAGGTTTGCGCGGTGGCCCAAGTGTGGCCTATCACGCCTCAAAGGCCTTTGGGCAGAATTACCTTGAGGGCTTA
TGTATGCACGCCCAGCGCCTCAAGTTACCCATTACGATTACCGATATCCAACTCGGTTTACTCGACAAAGCCGCCATGCA
ACAAAGTGCAATGTGGCTTGCCCCATTACCGCACGTTGCAGCACAGATCATCAAAGCAATGAAGCAAGGCAAACGCCGCG
TCTATGTGACCAAACGCTGGCGCCTCGTCGCTTGGCTCACCGTATTATTACCCGAATTTATCTATAACACTCGCCACTGG
AAGGCTAAAAAGCCAAAGCGCTAA

Upstream 100 bases:

>100_bases
TACATAAAGACTTCTAGATGTCCATACGCCCAAGCTATAAATCTTGTCTTGGCGAACATATCTTCCTATCATAAGCCACC
ATTTCGTTGCCGAAAAACCT

Downstream 100 bases:

>100_bases
GTCGGCTTAACCTGAGTGGAACATGCGCGATAAAAAGTGCAGAAACGAAAAAGGAGCCTAAGGCTCCTTTTTTACGCTTA
TCTGATCCGTAGATTAGAAA

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MTQATAIIVGASSQLSREIAKQLADQQVELVLFAQDPESLRDFALSLPTKVQVFSLQIEQPQAIITQLESVWQSLGGAHL
VLVNTGLNSYDPELPWLPEQDIIDVNVRGFAAICNTAFRLFREQGYGQLAAINSIAGLRGGPSVAYHASKAFGQNYLEGL
CMHAQRLKLPITITDIQLGLLDKAAMQQSAMWLAPLPHVAAQIIKAMKQGKRRVYVTKRWRLVAWLTVLLPEFIYNTRHW
KAKKPKR

Sequences:

>Translated_247_residues
MTQATAIIVGASSQLSREIAKQLADQQVELVLFAQDPESLRDFALSLPTKVQVFSLQIEQPQAIITQLESVWQSLGGAHL
VLVNTGLNSYDPELPWLPEQDIIDVNVRGFAAICNTAFRLFREQGYGQLAAINSIAGLRGGPSVAYHASKAFGQNYLEGL
CMHAQRLKLPITITDIQLGLLDKAAMQQSAMWLAPLPHVAAQIIKAMKQGKRRVYVTKRWRLVAWLTVLLPEFIYNTRHW
KAKKPKR
>Mature_246_residues
TQATAIIVGASSQLSREIAKQLADQQVELVLFAQDPESLRDFALSLPTKVQVFSLQIEQPQAIITQLESVWQSLGGAHLV
LVNTGLNSYDPELPWLPEQDIIDVNVRGFAAICNTAFRLFREQGYGQLAAINSIAGLRGGPSVAYHASKAFGQNYLEGLC
MHAQRLKLPITITDIQLGLLDKAAMQQSAMWLAPLPHVAAQIIKAMKQGKRRVYVTKRWRLVAWLTVLLPEFIYNTRHWK
AKKPKR

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: NA

Molecular weight: Translated: 27583; Mature: 27451

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQATAIIVGASSQLSREIAKQLADQQVELVLFAQDPESLRDFALSLPTKVQVFSLQIEQ
CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCEEEEEEEEECC
PQAIITQLESVWQSLGGAHLVLVNTGLNSYDPELPWLPEQDIIDVNVRGFAAICNTAFRL
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHH
FREQGYGQLAAINSIAGLRGGPSVAYHASKAFGQNYLEGLCMHAQRLKLPITITDIQLGL
HHHCCCCHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHH
LDKAAMQQSAMWLAPLPHVAAQIIKAMKQGKRRVYVTKRWRLVAWLTVLLPEFIYNTRHW
HHHHHHHHHCHHHCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCC
KAKKPKR
CCCCCCC
>Mature Secondary Structure 
TQATAIIVGASSQLSREIAKQLADQQVELVLFAQDPESLRDFALSLPTKVQVFSLQIEQ
CCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCEEEEEEEEECC
PQAIITQLESVWQSLGGAHLVLVNTGLNSYDPELPWLPEQDIIDVNVRGFAAICNTAFRL
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHH
FREQGYGQLAAINSIAGLRGGPSVAYHASKAFGQNYLEGLCMHAQRLKLPITITDIQLGL
HHHCCCCHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHH
LDKAAMQQSAMWLAPLPHVAAQIIKAMKQGKRRVYVTKRWRLVAWLTVLLPEFIYNTRHW
HHHHHHHHHCHHHCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCC
KAKKPKR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1730672 [H]