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The map label for this gene is yedQ [H]

Identifier: 126173705

GI number: 126173705

Start: 1703116

End: 1704006

Strand: Reverse

Name: yedQ [H]

Synonym: Sbal_1467

Alternate gene names: 126173705

Gene position: 1704006-1703116 (Counterclockwise)

Preceding gene: 126173707

Following gene: 126173687

Centisome position: 33.23

GC content: 44.56

Gene sequence:

>891_bases
ATGGACTTTGGCCTAGCGACCGAGCTATATCCCGACGAATATCGCTATCAAACAGAACATTATAGTCCCAATAATAATCC
ATTGGACTTGGTACAAGTGATCCAACAACTGCACGCCAGTTTAGATCCAAGGACAGTCTTTGCCTGCTATGGCAAAGTGC
TTGGACAACACTTGCCGATCCAAGGTGTGCGCTTAAGTTATGGCGAACATAAATTAAGCTGGGGCAAACGTTATGGTATC
AGCGTCAAACGACAGCTGATATGTGCAGGTATGCCACTGACGATTCAATACCAGTTATTAACGCCACTGACGCCATCGCA
AACCTCGAACCTCAAAGAGATTGAGCCGCTGTTATTGCAACCGTTATTAAATGCAATGCAATACCAAGAAATGTCGATGC
AAGCCATGTTTGACTCGCTCACAGGTTTAGGTAATCGCCATTACTACAGTCAAAGTCTCAGCAATGCGACCGCCAGAGCC
CATAGAAAACAAGGCTCTGTCGCACTCATAGTGCTCGATTTAGATAACTTTAAACAGCTAAATGATAAATTCGGCCATAA
ATGTGGTGATTATATACTGAAGGAATTTGGCGACATCATACGTGCGACCATACGTAATACGGATCAAGCATTCCGTATCG
GCGGTGACGAATTCGTTATTATTGTCCAAGGTAATATTCATGCGGCAGGCTTGTTGTGCGAACGGATTGTCTCGGCCATC
AATCAGCACAGTAGTTTCACCCAGTTTGGGGTGAGCTGTAGTTTAGGTGCGGCAGAATCACACGATACCATTGAAGCCGA
ACAACTTTATGAACTTGCCGATAAGGCGCTATATCAAGCTAAAGCAGCGGGACGTAACTGCTATAAACTCAGCCAAAATC
AATTAGTTTAG

Upstream 100 bases:

>100_bases
TGACTAACAAAGACAAATTTTATTAACAAATATTACGGCACGGTATTTGCTTAGACTAAGTAAGAGATGTATCGCACTAA
CATTTGCTGGAGTGATGATT

Downstream 100 bases:

>100_bases
ACGCGCAGGGATGCCAAATGAAATGCGATAACTCACTCGCAGCGCGTAATCTGTGAAGGTTCAAAACTAAAGGAAGGTTA
CTATCTCAATGTAGATCTCA

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MDFGLATELYPDEYRYQTEHYSPNNNPLDLVQVIQQLHASLDPRTVFACYGKVLGQHLPIQGVRLSYGEHKLSWGKRYGI
SVKRQLICAGMPLTIQYQLLTPLTPSQTSNLKEIEPLLLQPLLNAMQYQEMSMQAMFDSLTGLGNRHYYSQSLSNATARA
HRKQGSVALIVLDLDNFKQLNDKFGHKCGDYILKEFGDIIRATIRNTDQAFRIGGDEFVIIVQGNIHAAGLLCERIVSAI
NQHSSFTQFGVSCSLGAAESHDTIEAEQLYELADKALYQAKAAGRNCYKLSQNQLV

Sequences:

>Translated_296_residues
MDFGLATELYPDEYRYQTEHYSPNNNPLDLVQVIQQLHASLDPRTVFACYGKVLGQHLPIQGVRLSYGEHKLSWGKRYGI
SVKRQLICAGMPLTIQYQLLTPLTPSQTSNLKEIEPLLLQPLLNAMQYQEMSMQAMFDSLTGLGNRHYYSQSLSNATARA
HRKQGSVALIVLDLDNFKQLNDKFGHKCGDYILKEFGDIIRATIRNTDQAFRIGGDEFVIIVQGNIHAAGLLCERIVSAI
NQHSSFTQFGVSCSLGAAESHDTIEAEQLYELADKALYQAKAAGRNCYKLSQNQLV
>Mature_296_residues
MDFGLATELYPDEYRYQTEHYSPNNNPLDLVQVIQQLHASLDPRTVFACYGKVLGQHLPIQGVRLSYGEHKLSWGKRYGI
SVKRQLICAGMPLTIQYQLLTPLTPSQTSNLKEIEPLLLQPLLNAMQYQEMSMQAMFDSLTGLGNRHYYSQSLSNATARA
HRKQGSVALIVLDLDNFKQLNDKFGHKCGDYILKEFGDIIRATIRNTDQAFRIGGDEFVIIVQGNIHAAGLLCERIVSAI
NQHSSFTQFGVSCSLGAAESHDTIEAEQLYELADKALYQAKAAGRNCYKLSQNQLV

Specific function: Involves in the regulation of cellulose production [H]

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87082007, Length=170, Percent_Identity=36.4705882352941, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI145693134, Length=183, Percent_Identity=32.2404371584699, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1787262, Length=157, Percent_Identity=35.031847133758, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1788381, Length=193, Percent_Identity=30.5699481865285, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI87081974, Length=198, Percent_Identity=31.3131313131313, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1786584, Length=234, Percent_Identity=26.9230769230769, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87081977, Length=153, Percent_Identity=33.9869281045752, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI87081881, Length=161, Percent_Identity=30.4347826086957, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1787816, Length=171, Percent_Identity=26.9005847953216, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788956, Length=182, Percent_Identity=31.3186813186813, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1787541, Length=164, Percent_Identity=29.8780487804878, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787056, Length=158, Percent_Identity=32.9113924050633, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788085, Length=169, Percent_Identity=30.7692307692308, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1787802, Length=167, Percent_Identity=26.9461077844311, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 33190; Mature: 33190

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFGLATELYPDEYRYQTEHYSPNNNPLDLVQVIQQLHASLDPRTVFACYGKVLGQHLPI
CCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
QGVRLSYGEHKLSWGKRYGISVKRQLICAGMPLTIQYQLLTPLTPSQTSNLKEIEPLLLQ
CCEEECCCCHHHCCCHHCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHH
PLLNAMQYQEMSMQAMFDSLTGLGNRHYYSQSLSNATARAHRKQGSVALIVLDLDNFKQL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHH
NDKFGHKCGDYILKEFGDIIRATIRNTDQAFRIGGDEFVIIVQGNIHAAGLLCERIVSAI
HHHHCHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCEEEEEEECCCHHHHHHHHHHHHHH
NQHSSFTQFGVSCSLGAAESHDTIEAEQLYELADKALYQAKAAGRNCYKLSQNQLV
HCCCCHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
>Mature Secondary Structure
MDFGLATELYPDEYRYQTEHYSPNNNPLDLVQVIQQLHASLDPRTVFACYGKVLGQHLPI
CCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
QGVRLSYGEHKLSWGKRYGISVKRQLICAGMPLTIQYQLLTPLTPSQTSNLKEIEPLLLQ
CCEEECCCCHHHCCCHHCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHH
PLLNAMQYQEMSMQAMFDSLTGLGNRHYYSQSLSNATARAHRKQGSVALIVLDLDNFKQL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHH
NDKFGHKCGDYILKEFGDIIRATIRNTDQAFRIGGDEFVIIVQGNIHAAGLLCERIVSAI
HHHHCHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCEEEEEEECCCHHHHHHHHHHHHHH
NQHSSFTQFGVSCSLGAAESHDTIEAEQLYELADKALYQAKAAGRNCYKLSQNQLV
HCCCCHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA