| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173659
Identifier: 126173659
GI number: 126173659
Start: 1638264
End: 1638440
Strand: Reverse
Name: 126173659
Synonym: Sbal_1421
Alternate gene names: NA
Gene position: 1638440-1638264 (Counterclockwise)
Preceding gene: 126173660
Following gene: 126173658
Centisome position: 31.95
GC content: 41.81
Gene sequence:
>177_bases ATGTTAGGTTGGACATTAGTATTTCTGGTTGTTGCTGTTATTGCAGGCCTATTAGGATTTACTGGGATAGCTGGCGCAGC GGCGGGCATAGCGAAAATCATTTTCTTAATCTTTATTGTGTTATTAGTGATTTCCCTGCTGGTTAATGCCTTTAGAGGCA AGTCACCGCGACTTTAA
Upstream 100 bases:
>100_bases GTTGGCATTATGTTCGCAATCTAGAAATAACCATTAGCCGTTACCTTACAAATGACACAAACGGTCATGCGAAGGATTAA GACAAGGGCAGGAGGTTCAT
Downstream 100 bases:
>100_bases TTATTTTTTAGAAAGGAGATGTATATGAAACCATTTACTCTGATGACAAGCGCTTCACTGGCATTATTACTCGCCCTCGG TTTAACCGCTTGTAGCGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 58; Mature: 58
Protein sequence:
>58_residues MLGWTLVFLVVAVIAGLLGFTGIAGAAAGIAKIIFLIFIVLLVISLLVNAFRGKSPRL
Sequences:
>Translated_58_residues MLGWTLVFLVVAVIAGLLGFTGIAGAAAGIAKIIFLIFIVLLVISLLVNAFRGKSPRL >Mature_58_residues MLGWTLVFLVVAVIAGLLGFTGIAGAAAGIAKIIFLIFIVLLVISLLVNAFRGKSPRL
Specific function: Unknown
COG id: COG5487
COG function: function code S; Small integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0391 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1421_SHEB5 (A3D2H6)
Other databases:
- EMBL: CP000563 - RefSeq: YP_001049808.1 - STRING: A3D2H6 - GeneID: 4841670 - GenomeReviews: CP000563_GR - KEGG: sbl:Sbal_1421 - NMPDR: fig|325240.3.peg.1345 - eggNOG: NOG121247 - HOGENOM: HBG208994 - OMA: AAKIIFF - ProtClustDB: PRK13682 - HAMAP: MF_01361 - InterPro: IPR009760 - PIRSF: PIRSF036466
Pfam domain/function: PF07043 DUF1328
EC number: NA
Molecular weight: Translated: 6040; Mature: 6040
Theoretical pI: Translated: 12.53; Mature: 12.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1461a690)-; HASH(0x14be42d4)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGWTLVFLVVAVIAGLLGFTGIAGAAAGIAKIIFLIFIVLLVISLLVNAFRGKSPRL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH >Mature Secondary Structure MLGWTLVFLVVAVIAGLLGFTGIAGAAAGIAKIIFLIFIVLLVISLLVNAFRGKSPRL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA