| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is nag096 [H]
Identifier: 126173643
GI number: 126173643
Start: 1616297
End: 1619029
Strand: Reverse
Name: nag096 [H]
Synonym: Sbal_1405
Alternate gene names: 126173643
Gene position: 1619029-1616297 (Counterclockwise)
Preceding gene: 126173644
Following gene: 126173642
Centisome position: 31.58
GC content: 48.81
Gene sequence:
>2733_bases GTGAAAGGACTAATAAAAAAGAAAGGGAAAATAAAGTGGCAGAGGATTAAGACGGCCTTAGTCAGCGGCATAATGGCCGT GCTTCCCGCGATGCCTGTGCTTTCAATACTTGTTATGCCATCAGTACAGGCAGCCAACGCCGTGCAGGAGGCAAATCATG TCGCACTTAATCAATTGGCCGATAAGCTCCAATTAAATTATCAGTTAACCGCCAGTTATCTTGAAACCTGTCCCGCTAAA GAAACCCAGTGCTATCGCTCCGCCATTGAGCTAACCCTGCCCACTCAGTTATCTAATGAAGAGTTAAATCACGGCGACTG GCAAATTTATTTCAGCCAATTATCGCCTGTTTATTTCGTCGATGCGGGTGACTTTAACATTGAGCATATCAATGGCGATT TACACAAAATCGTCCCTAAAGCCAGCTTTAAGGGCTTCGTCGCCAATCAGTTTTATCGTATTGAGTTTTATAGCCAAGGC AGCCAAATCACCCGTTCCGAGTTTATGCCAAACTTCTTCGTCGCTATGGGTGATAAAGCGCAGCTCATAAAGAGCACTCA AACCCAGCGCAATAAAGAGACGGGGTTGCCCGAGCAAGCCTACCTCGCGCCTTTTAATGCCGATCAACAATTCTTACTGG CAAAAAACGATGCAACCCCCTTTGCCGATGGCCAGTATTTAGCCGAGCAATATCAAGCCTTAGCCGCAAACGCAAACAAG GCAACTGACATTAGCGACAAACTCATCCCCACGCCACTTCACAGCCAAAGCCTAGACTCAGCGCCCTTATCTCTTGCCAA AGGTTATCGACTCACGGCTGATGCGGTAGACTTTAAAGGACGGCAGGCGGCGTTTGATTACCTCGCCAGTTTAGGGTTTG CAGCCAAGGACAAAGGCACGCCGCTGTTATTGCAACTCGATACTCAAGCCCCTAAAGTCGCCAGCACTGAAGCCCATGAT AGTGAAATGAAAACCAGCGAAGCCTATCAGTTAACCATAACGGCTGAGCAAATCAGTATTCGAGCGGGCACTGAAGCGGG ACTCTTCTATGGCCTACAAAGCCTAGCAGGGTTGATCAGTTTAAGTGACGATCAACTGGTCGCCATCGAGATCCAAGACC AGCCTCGCTACGCCTTTCGCGGCCTGCACATCGATTTAGCCCGTAACTTCCACTCGCTAGATTTTATTAAACGCATCATT CCACAACTCGCCGCCTATAAAATCAATAAGCTGCATTTGCACTTAGCCGACGATGAAGGCTGGCGTTTAGCCATCCCCGG CTTACCCGAACTGACCGATGTGGGCGCAAAACGCTGTTTCGATTTAACCGAGCAAAGCTGTTTATTGCCACAACTGGGCA GCGGAATTGCGGACGTAAAACCCGTCGATGGCTACTTAACCGTGGCGCAATACCAAGAAATATTACAACTGGCTGATGCT CACCATATCGAAGTGATCCCTTCACTGGACATGCCTGGGCATTCACGCGCAGCGATAAAATCCATGGAGGCGCGTTATCA CAATTACCTCGCCAAGGGAGACAAAGCTAAGGCGGAGGAGTTTTTACTGACTGAATTTGCAGATAAAACCCAATATTCGT CGCTTCAGTATTATCACGACAACACACTCAATGTGTGCTTGGCGAGCACCTATCACTTTATCGATACTGTGATTGATGAA GTTAAAAAAATGCACCAAGCCGTAGGCATTCCCTTAGTGCATTACCACATAGGCGCCGATGAAACCGCGGGCGCTTGGGT CGACTCTCCCGCGTGTATCACAATGAAAAAACAAAAAGCCGATGAGTTAACCGGACTCCACTCACTCAATGGCTACTTTA TCGAACGCGTTGCTAACATGCTGGCAGATAAAGGGATTATTGCTGCTGGCTGGAATGATGGTATGGGTGAAGTGCGCCCC GAAAACATGCCCGCCCAAGTGCAATCTAACGCTTGGTCACTGATTTCGGACAACGGCCATCAAATCGCCCATAAGCAAGT CAATCTTGGCTGGAAGGTCGTGCTCTCAACGCCGGAAGTCACCTATTTTGATTTTCCCTATGCTAGCCATCCAGATGAGC GCGGTAATCATTGGGCAGCAAGGGCAATTGACAGTTTTAAGGTGTTTAGCTTTATGCCCGACAACCTGCCCGCCCATGCC GAGCGCTGGCGCAATAGTTTAAATCAGCCATTTATTGCGGACGACAGCCACAGCCAGCTCAAGCCGGGACACAGATTTTA CGGCTTGCAGGGGCATCTTTGGAGCGAAATGGTGCAATCGGATGAGCAAGCAGAATACATGCTATTCCCGCGCATGATAG CCCTTGCAGAACGGGCTTGGCACAAGGCATCGTGGGAATTAGCCTATGATTATCAAGGTAAAATCTATAGCCAACAGACT CAACATTTTGCCAGCCAACTCAATGGCCAAGCCGAGCAAGTCCTCAAACAGGATTGGCAAACCTTCGCCGCAGTGTACGC CAATAAAGTGCAACCTAAGTTAGCAAAAGCGGGAGTTTTCTACCGCATAGCGCCACCAGGAATACGTATTGAAAATCAGC TGTTAGTGCTCAATAGCCTGTATCCCAATGCCGAGCTGGAATACCAACTCGACTCAGGACCTTGGCTAACCTACCGCCAA GCATTCAAGCTTAATGATGTCAAACACATCCGCGCCAGAGTCAAAGATGGTACGCGTTACTCTCGCCCATCGACTTGGCA AAGCTCACTCTAA
Upstream 100 bases:
>100_bases TTACAACAACAGAAAATCAAGCGATTTAAACTAACATCACAATGCTCCAGCAATTGATCGACACGGCGCAGTGGTTTTTA CAACAAAAGGACTCAGTTAA
Downstream 100 bases:
>100_bases TCGTTCATCGCACAATGTCGGCCATCACATGTGATGGCCGATGCGTTAATTGACGATTAATGCCGCTTGTCGATGGGTTA AGCATGGGCTTAACGCTCTT
Product: Beta-N-acetylhexosaminidase
Products: NA
Alternate protein names: Beta-GlcNAcase; Beta-N-acetylhexosaminidase; Beta-NAHase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 910; Mature: 910
Protein sequence:
>910_residues MKGLIKKKGKIKWQRIKTALVSGIMAVLPAMPVLSILVMPSVQAANAVQEANHVALNQLADKLQLNYQLTASYLETCPAK ETQCYRSAIELTLPTQLSNEELNHGDWQIYFSQLSPVYFVDAGDFNIEHINGDLHKIVPKASFKGFVANQFYRIEFYSQG SQITRSEFMPNFFVAMGDKAQLIKSTQTQRNKETGLPEQAYLAPFNADQQFLLAKNDATPFADGQYLAEQYQALAANANK ATDISDKLIPTPLHSQSLDSAPLSLAKGYRLTADAVDFKGRQAAFDYLASLGFAAKDKGTPLLLQLDTQAPKVASTEAHD SEMKTSEAYQLTITAEQISIRAGTEAGLFYGLQSLAGLISLSDDQLVAIEIQDQPRYAFRGLHIDLARNFHSLDFIKRII PQLAAYKINKLHLHLADDEGWRLAIPGLPELTDVGAKRCFDLTEQSCLLPQLGSGIADVKPVDGYLTVAQYQEILQLADA HHIEVIPSLDMPGHSRAAIKSMEARYHNYLAKGDKAKAEEFLLTEFADKTQYSSLQYYHDNTLNVCLASTYHFIDTVIDE VKKMHQAVGIPLVHYHIGADETAGAWVDSPACITMKKQKADELTGLHSLNGYFIERVANMLADKGIIAAGWNDGMGEVRP ENMPAQVQSNAWSLISDNGHQIAHKQVNLGWKVVLSTPEVTYFDFPYASHPDERGNHWAARAIDSFKVFSFMPDNLPAHA ERWRNSLNQPFIADDSHSQLKPGHRFYGLQGHLWSEMVQSDEQAEYMLFPRMIALAERAWHKASWELAYDYQGKIYSQQT QHFASQLNGQAEQVLKQDWQTFAAVYANKVQPKLAKAGVFYRIAPPGIRIENQLLVLNSLYPNAELEYQLDSGPWLTYRQ AFKLNDVKHIRARVKDGTRYSRPSTWQSSL
Sequences:
>Translated_910_residues MKGLIKKKGKIKWQRIKTALVSGIMAVLPAMPVLSILVMPSVQAANAVQEANHVALNQLADKLQLNYQLTASYLETCPAK ETQCYRSAIELTLPTQLSNEELNHGDWQIYFSQLSPVYFVDAGDFNIEHINGDLHKIVPKASFKGFVANQFYRIEFYSQG SQITRSEFMPNFFVAMGDKAQLIKSTQTQRNKETGLPEQAYLAPFNADQQFLLAKNDATPFADGQYLAEQYQALAANANK ATDISDKLIPTPLHSQSLDSAPLSLAKGYRLTADAVDFKGRQAAFDYLASLGFAAKDKGTPLLLQLDTQAPKVASTEAHD SEMKTSEAYQLTITAEQISIRAGTEAGLFYGLQSLAGLISLSDDQLVAIEIQDQPRYAFRGLHIDLARNFHSLDFIKRII PQLAAYKINKLHLHLADDEGWRLAIPGLPELTDVGAKRCFDLTEQSCLLPQLGSGIADVKPVDGYLTVAQYQEILQLADA HHIEVIPSLDMPGHSRAAIKSMEARYHNYLAKGDKAKAEEFLLTEFADKTQYSSLQYYHDNTLNVCLASTYHFIDTVIDE VKKMHQAVGIPLVHYHIGADETAGAWVDSPACITMKKQKADELTGLHSLNGYFIERVANMLADKGIIAAGWNDGMGEVRP ENMPAQVQSNAWSLISDNGHQIAHKQVNLGWKVVLSTPEVTYFDFPYASHPDERGNHWAARAIDSFKVFSFMPDNLPAHA ERWRNSLNQPFIADDSHSQLKPGHRFYGLQGHLWSEMVQSDEQAEYMLFPRMIALAERAWHKASWELAYDYQGKIYSQQT QHFASQLNGQAEQVLKQDWQTFAAVYANKVQPKLAKAGVFYRIAPPGIRIENQLLVLNSLYPNAELEYQLDSGPWLTYRQ AFKLNDVKHIRARVKDGTRYSRPSTWQSSL >Mature_910_residues MKGLIKKKGKIKWQRIKTALVSGIMAVLPAMPVLSILVMPSVQAANAVQEANHVALNQLADKLQLNYQLTASYLETCPAK ETQCYRSAIELTLPTQLSNEELNHGDWQIYFSQLSPVYFVDAGDFNIEHINGDLHKIVPKASFKGFVANQFYRIEFYSQG SQITRSEFMPNFFVAMGDKAQLIKSTQTQRNKETGLPEQAYLAPFNADQQFLLAKNDATPFADGQYLAEQYQALAANANK ATDISDKLIPTPLHSQSLDSAPLSLAKGYRLTADAVDFKGRQAAFDYLASLGFAAKDKGTPLLLQLDTQAPKVASTEAHD SEMKTSEAYQLTITAEQISIRAGTEAGLFYGLQSLAGLISLSDDQLVAIEIQDQPRYAFRGLHIDLARNFHSLDFIKRII PQLAAYKINKLHLHLADDEGWRLAIPGLPELTDVGAKRCFDLTEQSCLLPQLGSGIADVKPVDGYLTVAQYQEILQLADA HHIEVIPSLDMPGHSRAAIKSMEARYHNYLAKGDKAKAEEFLLTEFADKTQYSSLQYYHDNTLNVCLASTYHFIDTVIDE VKKMHQAVGIPLVHYHIGADETAGAWVDSPACITMKKQKADELTGLHSLNGYFIERVANMLADKGIIAAGWNDGMGEVRP ENMPAQVQSNAWSLISDNGHQIAHKQVNLGWKVVLSTPEVTYFDFPYASHPDERGNHWAARAIDSFKVFSFMPDNLPAHA ERWRNSLNQPFIADDSHSQLKPGHRFYGLQGHLWSEMVQSDEQAEYMLFPRMIALAERAWHKASWELAYDYQGKIYSQQT QHFASQLNGQAEQVLKQDWQTFAAVYANKVQPKLAKAGVFYRIAPPGIRIENQLLVLNSLYPNAELEYQLDSGPWLTYRQ AFKLNDVKHIRARVKDGTRYSRPSTWQSSL
Specific function: Unknown
COG id: COG3525
COG function: function code G; N-acetyl-beta-hexosaminidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 20 family [H]
Homologues:
Organism=Homo sapiens, GI4504373, Length=467, Percent_Identity=21.4132762312634, Blast_Score=78, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17569815, Length=308, Percent_Identity=25.974025974026, Blast_Score=82, Evalue=2e-15, Organism=Drosophila melanogaster, GI17933586, Length=135, Percent_Identity=35.5555555555556, Blast_Score=72, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015882 - InterPro: IPR008965 - InterPro: IPR004866 - InterPro: IPR012291 - InterPro: IPR001540 - InterPro: IPR015883 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF03173 CHB_HEX; PF00728 Glyco_hydro_20; PF02838 Glyco_hydro_20b [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 101981; Mature: 101981
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGLIKKKGKIKWQRIKTALVSGIMAVLPAMPVLSILVMPSVQAANAVQEANHVALNQLA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH DKLQLNYQLTASYLETCPAKETQCYRSAIELTLPTQLSNEELNHGDWQIYFSQLSPVYFV HHHHCCCEEHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEECCCCEEEE DAGDFNIEHINGDLHKIVPKASFKGFVANQFYRIEFYSQGSQITRSEFMPNFFVAMGDKA ECCCCEEEEECCHHHHHCCCCCCCCEECCEEEEEEEECCCCCHHHHHCCCCEEEEECCHH QLIKSTQTQRNKETGLPEQAYLAPFNADQQFLLAKNDATPFADGQYLAEQYQALAANANK HHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCC ATDISDKLIPTPLHSQSLDSAPLSLAKGYRLTADAVDFKGRQAAFDYLASLGFAAKDKGT CCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEHHHCCCCHHHHHHHHHHCCCCCCCCCC PLLLQLDTQAPKVASTEAHDSEMKTSEAYQLTITAEQISIRAGTEAGLFYGLQSLAGLIS EEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEHEEEEECCCCHHHHHHHHHHHHHEE LSDDQLVAIEIQDQPRYAFRGLHIDLARNFHSLDFIKRIIPQLAAYKINKLHLHLADDEG CCCCCEEEEEECCCCCHHHCCEEEEHHCCCHHHHHHHHHHHHHHHEEEEEEEEEEECCCC WRLAIPGLPELTDVGAKRCFDLTEQSCLLPQLGSGIADVKPVDGYLTVAQYQEILQLADA CEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCEEEHHHHHHHHHHHCC HHIEVIPSLDMPGHSRAAIKSMEARYHNYLAKGDKAKAEEFLLTEFADKTQYSSLQYYHD CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEC NTLNVCLASTYHFIDTVIDEVKKMHQAVGIPLVHYHIGADETAGAWVDSPACITMKKQKA CCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHH DELTGLHSLNGYFIERVANMLADKGIIAAGWNDGMGEVRPENMPAQVQSNAWSLISDNGH HHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHCCCEEEECCCCC QIAHKQVNLGWKVVLSTPEVTYFDFPYASHPDERGNHWAARAIDSFKVFSFMPDNLPAHA EEEEEEECCCEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCHHH ERWRNSLNQPFIADDSHSQLKPGHRFYGLQGHLWSEMVQSDEQAEYMLFPRMIALAERAW HHHHHHCCCCEECCCCCCCCCCCCEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH HKASWELAYDYQGKIYSQQTQHFASQLNGQAEQVLKQDWQTFAAVYANKVQPKLAKAGVF HCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEE YRIAPPGIRIENQLLVLNSLYPNAELEYQLDSGPWLTYRQAFKLNDVKHIRARVKDGTRY EEECCCCCEECCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHCCHHHHHHHHHCCCCCC SRPSTWQSSL CCCCCCCCCC >Mature Secondary Structure MKGLIKKKGKIKWQRIKTALVSGIMAVLPAMPVLSILVMPSVQAANAVQEANHVALNQLA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH DKLQLNYQLTASYLETCPAKETQCYRSAIELTLPTQLSNEELNHGDWQIYFSQLSPVYFV HHHHCCCEEHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEECCCCEEEE DAGDFNIEHINGDLHKIVPKASFKGFVANQFYRIEFYSQGSQITRSEFMPNFFVAMGDKA ECCCCEEEEECCHHHHHCCCCCCCCEECCEEEEEEEECCCCCHHHHHCCCCEEEEECCHH QLIKSTQTQRNKETGLPEQAYLAPFNADQQFLLAKNDATPFADGQYLAEQYQALAANANK HHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCC ATDISDKLIPTPLHSQSLDSAPLSLAKGYRLTADAVDFKGRQAAFDYLASLGFAAKDKGT CCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEHHHCCCCHHHHHHHHHHCCCCCCCCCC PLLLQLDTQAPKVASTEAHDSEMKTSEAYQLTITAEQISIRAGTEAGLFYGLQSLAGLIS EEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEHEEEEECCCCHHHHHHHHHHHHHEE LSDDQLVAIEIQDQPRYAFRGLHIDLARNFHSLDFIKRIIPQLAAYKINKLHLHLADDEG CCCCCEEEEEECCCCCHHHCCEEEEHHCCCHHHHHHHHHHHHHHHEEEEEEEEEEECCCC WRLAIPGLPELTDVGAKRCFDLTEQSCLLPQLGSGIADVKPVDGYLTVAQYQEILQLADA CEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCEEEHHHHHHHHHHHCC HHIEVIPSLDMPGHSRAAIKSMEARYHNYLAKGDKAKAEEFLLTEFADKTQYSSLQYYHD CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEC NTLNVCLASTYHFIDTVIDEVKKMHQAVGIPLVHYHIGADETAGAWVDSPACITMKKQKA CCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHH DELTGLHSLNGYFIERVANMLADKGIIAAGWNDGMGEVRPENMPAQVQSNAWSLISDNGH HHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHCCCEEEECCCCC QIAHKQVNLGWKVVLSTPEVTYFDFPYASHPDERGNHWAARAIDSFKVFSFMPDNLPAHA EEEEEEECCCEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCHHH ERWRNSLNQPFIADDSHSQLKPGHRFYGLQGHLWSEMVQSDEQAEYMLFPRMIALAERAW HHHHHHCCCCEECCCCCCCCCCCCEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH HKASWELAYDYQGKIYSQQTQHFASQLNGQAEQVLKQDWQTFAAVYANKVQPKLAKAGVF HCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEE YRIAPPGIRIENQLLVLNSLYPNAELEYQLDSGPWLTYRQAFKLNDVKHIRARVKDGTRY EEECCCCCEECCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHCCHHHHHHHHHCCCCCC SRPSTWQSSL CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7574618 [H]