| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is 126173642
Identifier: 126173642
GI number: 126173642
Start: 1615804
End: 1616112
Strand: Reverse
Name: 126173642
Synonym: Sbal_1404
Alternate gene names: NA
Gene position: 1616112-1615804 (Counterclockwise)
Preceding gene: 126173643
Following gene: 126173640
Centisome position: 31.52
GC content: 44.34
Gene sequence:
>309_bases ATGCAATGCGCTTTCTCAGTGAAAGTTCACAATTATATTTTGCCTAACCTAAGGATCCACCTGCCGATGACAACAGCTTC TACTAGCCCCTTTGCCGTGTTAAATCAAACCACTGCGACCTCGTTCAATGAGCAGAAAAATCTGATTAAACGGGTATTTA AAGGTAAGCCAGTGCAATGTCCTAGCTGTAAACAGACATTAAAAGTGATATTGCCTGAGCAGGCAAAGGCAGAACAAGCG GCAGGAATTTACTGTGCCAAAGGCTGTACTGATATCGAACTCGATATGGAAGCCGTCGCGGGACTCTAA
Upstream 100 bases:
>100_bases TGGGCTTAACGCTCTTAAATTGAGGCTTTTCAATAACAGCGCAACTCAGGCTATAATCTCTCTATTCGCGAGCACACTGT ACCTGTGCAATGCGGTGCCG
Downstream 100 bases:
>100_bases CAAATTAGAATCAAAACTTTTGCCTTAACACTTTCGAATTAACACTACGGCAGTATTACGAATAACTCGCCGTAGCAGCA CTGATGACTTCGCGATTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MQCAFSVKVHNYILPNLRIHLPMTTASTSPFAVLNQTTATSFNEQKNLIKRVFKGKPVQCPSCKQTLKVILPEQAKAEQA AGIYCAKGCTDIELDMEAVAGL
Sequences:
>Translated_102_residues MQCAFSVKVHNYILPNLRIHLPMTTASTSPFAVLNQTTATSFNEQKNLIKRVFKGKPVQCPSCKQTLKVILPEQAKAEQA AGIYCAKGCTDIELDMEAVAGL >Mature_102_residues MQCAFSVKVHNYILPNLRIHLPMTTASTSPFAVLNQTTATSFNEQKNLIKRVFKGKPVQCPSCKQTLKVILPEQAKAEQA AGIYCAKGCTDIELDMEAVAGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11154; Mature: 11154
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQCAFSVKVHNYILPNLRIHLPMTTASTSPFAVLNQTTATSFNEQKNLIKRVFKGKPVQC CCCEEEEEECCEECCCCEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCC PSCKQTLKVILPEQAKAEQAAGIYCAKGCTDIELDMEAVAGL CCHHHHHHHHCCCCCCCHHHCCEEECCCCCCEEECHHHHCCC >Mature Secondary Structure MQCAFSVKVHNYILPNLRIHLPMTTASTSPFAVLNQTTATSFNEQKNLIKRVFKGKPVQC CCCEEEEEECCEECCCCEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCC PSCKQTLKVILPEQAKAEQAAGIYCAKGCTDIELDMEAVAGL CCHHHHHHHHCCCCCCCHHHCCEEECCCCCCEEECHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA