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The map label for this gene is bioC [C]

Identifier: 125624428

GI number: 125624428

Start: 1605419

End: 1606156

Strand: Reverse

Name: bioC [C]

Synonym: llmg_1629

Alternate gene names: 125624428

Gene position: 1606156-1605419 (Counterclockwise)

Preceding gene: 125624429

Following gene: 125624427

Centisome position: 63.5

GC content: 33.88

Gene sequence:

>738_bases
ATGCAACAAAATAAATATGACGATGACCAGTTTTTTAAAAATTATGCAGCAATGCCAAGGTCTAAAGATGGTTTGAAAGC
CGCTGGAGAGTGGTATGAATTAGAAAAAATACTACCAAACTTTCAAGGAAAGAAAGTTTTAGATTTAGGATGTGGCTATG
GTTGGCATTGTAAATATGCGGCTAACCATGGAGCGCTAGAAGTAGTAGGAATAGACCTCTCTCATAAGATGCTCGAAGTG
GCAAATAAAATGAATCATGATGCCCGAATTAAATATCGACAGTCTGCAATAGAAGAGATAGATTTTTCAACTGATTCTTT
TGATATTGTTTTTAGTTCTTTAGCCCTTCATTATATTTCAAATTTTGAGGAGCTAGTGAAGAAAATTTCAAAATCTCTTA
AAAAGAATGGTGAATTAATTTTTTCGGTCGAACACCCCCTGTTTACTTCTTCTGGAGAACAAGATTGGTCTTATGATGAG
AACGGTAATATCCGTCATTTTCCAGTTGATAATTATTATTATGAAGGTGTGAGGGAAGTCAATTTTCTAGGAAAGTCAGT
GATTAAATATCATAGAACAGTGACAACCTATTTGATGACTTTATTAAATGCAGGATTTGAACTTACTAATGTTATTGAAC
CTAAACCTCCAATTGAAATGAGAGAACTTGAGGAAATGAAAAATGAAATGAGGCGTCCGATGATGCTTATCATTTCGGCT
AAAAAAATTAGTCGCTAA

Upstream 100 bases:

>100_bases
AAAAGGAGACAAATGAATCAAGGAATTATTGCTCAAAAAATTGTATTTTCCATGTAAATATCTATAAAATCACTAACTAT
ATTTACATGGAGAAGAAAAA

Downstream 100 bases:

>100_bases
TTTCTTGATGTTAAAAGCTCCTAACTGAATCTAGGGGCTTTTATTTACTCTATATAGTATTATTAAGACTTGACGATACT
TGGCTTTAGTAATCTTTAAA

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MQQNKYDDDQFFKNYAAMPRSKDGLKAAGEWYELEKILPNFQGKKVLDLGCGYGWHCKYAANHGALEVVGIDLSHKMLEV
ANKMNHDARIKYRQSAIEEIDFSTDSFDIVFSSLALHYISNFEELVKKISKSLKKNGELIFSVEHPLFTSSGEQDWSYDE
NGNIRHFPVDNYYYEGVREVNFLGKSVIKYHRTVTTYLMTLLNAGFELTNVIEPKPPIEMRELEEMKNEMRRPMMLIISA
KKISR

Sequences:

>Translated_245_residues
MQQNKYDDDQFFKNYAAMPRSKDGLKAAGEWYELEKILPNFQGKKVLDLGCGYGWHCKYAANHGALEVVGIDLSHKMLEV
ANKMNHDARIKYRQSAIEEIDFSTDSFDIVFSSLALHYISNFEELVKKISKSLKKNGELIFSVEHPLFTSSGEQDWSYDE
NGNIRHFPVDNYYYEGVREVNFLGKSVIKYHRTVTTYLMTLLNAGFELTNVIEPKPPIEMRELEEMKNEMRRPMMLIISA
KKISR
>Mature_245_residues
MQQNKYDDDQFFKNYAAMPRSKDGLKAAGEWYELEKILPNFQGKKVLDLGCGYGWHCKYAANHGALEVVGIDLSHKMLEV
ANKMNHDARIKYRQSAIEEIDFSTDSFDIVFSSLALHYISNFEELVKKISKSLKKNGELIFSVEHPLFTSSGEQDWSYDE
NGNIRHFPVDNYYYEGVREVNFLGKSVIKYHRTVTTYLMTLLNAGFELTNVIEPKPPIEMRELEEMKNEMRRPMMLIISA
KKISR

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17561380, Length=124, Percent_Identity=33.0645161290323, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28442; Mature: 28442

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQNKYDDDQFFKNYAAMPRSKDGLKAAGEWYELEKILPNFQGKKVLDLGCGYGWHCKYA
CCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEE
ANHGALEVVGIDLSHKMLEVANKMNHDARIKYRQSAIEEIDFSTDSFDIVFSSLALHYIS
CCCCCEEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
NFEELVKKISKSLKKNGELIFSVEHPLFTSSGEQDWSYDENGNIRHFPVDNYYYEGVREV
HHHHHHHHHHHHHHCCCCEEEEECCCEECCCCCCCCCCCCCCCEEECCCCCHHHHHHHHH
NFLGKSVIKYHRTVTTYLMTLLNAGFELTNVIEPKPPIEMRELEEMKNEMRRPMMLIISA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEH
KKISR
HHHCC
>Mature Secondary Structure
MQQNKYDDDQFFKNYAAMPRSKDGLKAAGEWYELEKILPNFQGKKVLDLGCGYGWHCKYA
CCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEE
ANHGALEVVGIDLSHKMLEVANKMNHDARIKYRQSAIEEIDFSTDSFDIVFSSLALHYIS
CCCCCEEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
NFEELVKKISKSLKKNGELIFSVEHPLFTSSGEQDWSYDENGNIRHFPVDNYYYEGVREV
HHHHHHHHHHHHHHCCCCEEEEECCCEECCCCCCCCCCCCCCCEEECCCCCHHHHHHHHH
NFLGKSVIKYHRTVTTYLMTLLNAGFELTNVIEPKPPIEMRELEEMKNEMRRPMMLIISA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEH
KKISR
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]