| Definition | Lactococcus lactis subsp. cremoris MG1363, complete genome. |
|---|---|
| Accession | NC_009004 |
| Length | 2,529,478 |
Click here to switch to the map view.
The map label for this gene is 125624427
Identifier: 125624427
GI number: 125624427
Start: 1604605
End: 1605246
Strand: Reverse
Name: 125624427
Synonym: llmg_1628
Alternate gene names: NA
Gene position: 1605246-1604605 (Counterclockwise)
Preceding gene: 125624428
Following gene: 125624426
Centisome position: 63.46
GC content: 33.64
Gene sequence:
>642_bases ATGAAAAGTATATATATGGTTACGATTCTTTTAGTAACGGCATTTGGAATGTCAGCTTGCAGTTCAAAACAAACTAAAGA AGTTTCAAAAACGACTTCTGAAAGTAGCTTCATCTCTCACCAAAGATCTACTTCTCAAACTAATTCAAGTACAAAAAGTC AAACTAGTAGTTCAAAAACAACAACAACTGACGAATCAAGTTCAACGATTCAAGCAGAATTAAAATGGAATTCAGAAAAG AAGTTCCGACTTGCAGAGTTTATGAGTGCATGGGGGAAAGAAATGAATCAAAACTATAGTCAATATGATCCTACGAATAA CGTTGACTTTTATGGACTCTCTCTTCCATTTTCAGTATTAAATGATAATACAGCTTGGAAAGCGACCATTAATAATCAAC CAATTGATTTAAGATGGTCAGAGACAGGAGAGGGAGAAGGAGATTATTTATTAGTTGATGTTTACTCGGATTTTGGGACA AAGAATACATTTGAAAATCATGTCTATTTCTTTGTGCTTAAAGCTGGACGTCCTCTTGTGCTCTACACTGGCCAAAATCA AGGAAATACCAATCATTATTTACACTTAAAAGAAACAGAGAATAATGAATTAAAGAATGCCTTTGCTCGAATTGTTGGAT AA
Upstream 100 bases:
>100_bases ACGATACTTGGCTTTAGTAATCTTTAAAATTTAATACTTTTTTAGGATATAAATAGTTTTTTTATTACTTTTGAGGTAGA ATAAAATTAGGAGAAAATAA
Downstream 100 bases:
>100_bases ATTTATAAAATTAAAAGTAAGTCTGCAAGCTATTGCAGGCTTTTTTAGAACTCAAAAATTTTTTTCCTTAAAGAATTTTT ATTCTTGACAAAAGATAGCG
Product: putative secreted protein
Products: NA
Alternate protein names: Secreted Protein
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKSIYMVTILLVTAFGMSACSSKQTKEVSKTTSESSFISHQRSTSQTNSSTKSQTSSSKTTTTDESSSTIQAELKWNSEK KFRLAEFMSAWGKEMNQNYSQYDPTNNVDFYGLSLPFSVLNDNTAWKATINNQPIDLRWSETGEGEGDYLLVDVYSDFGT KNTFENHVYFFVLKAGRPLVLYTGQNQGNTNHYLHLKETENNELKNAFARIVG
Sequences:
>Translated_213_residues MKSIYMVTILLVTAFGMSACSSKQTKEVSKTTSESSFISHQRSTSQTNSSTKSQTSSSKTTTTDESSSTIQAELKWNSEK KFRLAEFMSAWGKEMNQNYSQYDPTNNVDFYGLSLPFSVLNDNTAWKATINNQPIDLRWSETGEGEGDYLLVDVYSDFGT KNTFENHVYFFVLKAGRPLVLYTGQNQGNTNHYLHLKETENNELKNAFARIVG >Mature_213_residues MKSIYMVTILLVTAFGMSACSSKQTKEVSKTTSESSFISHQRSTSQTNSSTKSQTSSSKTTTTDESSSTIQAELKWNSEK KFRLAEFMSAWGKEMNQNYSQYDPTNNVDFYGLSLPFSVLNDNTAWKATINNQPIDLRWSETGEGEGDYLLVDVYSDFGT KNTFENHVYFFVLKAGRPLVLYTGQNQGNTNHYLHLKETENNELKNAFARIVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24022; Mature: 24022
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIYMVTILLVTAFGMSACSSKQTKEVSKTTSESSFISHQRSTSQTNSSTKSQTSSSKT CCHHHHHHHHHHHHHCHHHHCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCC TTTDESSSTIQAELKWNSEKKFRLAEFMSAWGKEMNQNYSQYDPTNNVDFYGLSLPFSVL CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHH NDNTAWKATINNQPIDLRWSETGEGEGDYLLVDVYSDFGTKNTFENHVYFFVLKAGRPLV CCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCEEE LYTGQNQGNTNHYLHLKETENNELKNAFARIVG EEECCCCCCCCEEEEEEECCCCHHHHHHHHHCC >Mature Secondary Structure MKSIYMVTILLVTAFGMSACSSKQTKEVSKTTSESSFISHQRSTSQTNSSTKSQTSSSKT CCHHHHHHHHHHHHHCHHHHCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCC TTTDESSSTIQAELKWNSEKKFRLAEFMSAWGKEMNQNYSQYDPTNNVDFYGLSLPFSVL CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHH NDNTAWKATINNQPIDLRWSETGEGEGDYLLVDVYSDFGTKNTFENHVYFFVLKAGRPLV CCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCEEE LYTGQNQGNTNHYLHLKETENNELKNAFARIVG EEECCCCCCCCEEEEEEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA