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The map label for this gene is ribU

Identifier: 125624025

GI number: 125624025

Start: 1164663

End: 1165283

Strand: Direct

Name: ribU

Synonym: llmg_1195

Alternate gene names: 125624025

Gene position: 1164663-1165283 (Clockwise)

Preceding gene: 125624024

Following gene: 125624026

Centisome position: 46.04

GC content: 34.62

Gene sequence:

>621_bases
ATGTCTAAAACACGTCGGATGGTATTAATTGCCATGCTTGCTGCATTATCAACAATTTTATTGTTGCCAATTTTGCAGTT
TCCGTTATTGCCTGGAATTGATTTTATGAAAGTGGAACTTTCAATCATTCCTGTACTTATAGGAGTCTTTACTTTAGGAT
TGGGTGATGGATTCATTATCCTCTTTATTCGCTCTGTCTTATGGTATCTTCTATTTAATCAAGGCCCATCAACATGGATT
GGAGTTCCAATGAACTTTGTTGCTCTAGGAATTTTCATGGCCATCGTTTGGTTCTTTACAAAGAAGAAGTTTTCAATTAA
AAATTATACAGTTGGGATTGTCTTGGCGACTATTGCTTCAGTCCTTGTAATGATGGTATTGAATGTTTTCTATGCTCTAC
CATTGTATCGTCTGGCTGCAGGATTTGATGTTGACAAAATTTTTGCTGGAGCAACACATCTCTTTAACATGGGTTCGCTA
TCAGTTACTTTAAATCCAACTTACCTCTTAACAGTTGTTTTACCTTTCAATGCCTTGCAATATATCATTTTTGCCCTTGT
TTTCGGCTTGATTGTTACTGTATTCAAAAAAAATAAAGTAGTAAAATTTTACAATGCTTAA

Upstream 100 bases:

>100_bases
AATCGACCTCGGTCGACTTACTGTTTTTAGCTAAACCAAAAATGTCTATCAACTTCCTCGAAATTTGAAGAATTATTTTC
TCATATTTGGAGGTTTTTTT

Downstream 100 bases:

>100_bases
TTCAAAAGATTGGGCAAATAATTCTAAATAAAAATACGGTGGGACTTTCCTACCGTATTTTTTTTATTTTATAACTTAAT
GATTCAATATGTATAATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MSKTRRMVLIAMLAALSTILLLPILQFPLLPGIDFMKVELSIIPVLIGVFTLGLGDGFIILFIRSVLWYLLFNQGPSTWI
GVPMNFVALGIFMAIVWFFTKKKFSIKNYTVGIVLATIASVLVMMVLNVFYALPLYRLAAGFDVDKIFAGATHLFNMGSL
SVTLNPTYLLTVVLPFNALQYIIFALVFGLIVTVFKKNKVVKFYNA

Sequences:

>Translated_206_residues
MSKTRRMVLIAMLAALSTILLLPILQFPLLPGIDFMKVELSIIPVLIGVFTLGLGDGFIILFIRSVLWYLLFNQGPSTWI
GVPMNFVALGIFMAIVWFFTKKKFSIKNYTVGIVLATIASVLVMMVLNVFYALPLYRLAAGFDVDKIFAGATHLFNMGSL
SVTLNPTYLLTVVLPFNALQYIIFALVFGLIVTVFKKNKVVKFYNA
>Mature_205_residues
SKTRRMVLIAMLAALSTILLLPILQFPLLPGIDFMKVELSIIPVLIGVFTLGLGDGFIILFIRSVLWYLLFNQGPSTWIG
VPMNFVALGIFMAIVWFFTKKKFSIKNYTVGIVLATIASVLVMMVLNVFYALPLYRLAAGFDVDKIFAGATHLFNMGSLS
VTLNPTYLLTVVLPFNALQYIIFALVFGLIVTVFKKNKVVKFYNA

Specific function: Mediates riboflavin uptake, probably via a facilitated diffusion mechanism. May also transport FMN and roseoflavin

COG id: COG3601

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic riboflavin transporter (P- RFT) (TC 2.A.87) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIBU_LACLM (P0CI36)

Other databases:

- EMBL:   AM406671
- RefSeq:   YP_001032508.1
- GeneID:   4797377
- KEGG:   llm:llmg_1195
- eggNOG:   COG3601
- HOGENOM:   HBG617336
- OMA:   AIPLYAK
- GO:   GO:0006810

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22973; Mature: 22841

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x20deba3c)-; HASH(0x206862b4)-; HASH(0x20dabf54)-; HASH(0x20d4d780)-; HASH(0x204c3938)-; HASH(0x20f39114)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTRRMVLIAMLAALSTILLLPILQFPLLPGIDFMKVELSIIPVLIGVFTLGLGDGFII
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
LFIRSVLWYLLFNQGPSTWIGVPMNFVALGIFMAIVWFFTKKKFSIKNYTVGIVLATIAS
HHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VLVMMVLNVFYALPLYRLAAGFDVDKIFAGATHLFNMGSLSVTLNPTYLLTVVLPFNALQ
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEHHHHHHHH
YIIFALVFGLIVTVFKKNKVVKFYNA
HHHHHHHHHHHHHHHHCCCEEEEECH
>Mature Secondary Structure 
SKTRRMVLIAMLAALSTILLLPILQFPLLPGIDFMKVELSIIPVLIGVFTLGLGDGFII
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
LFIRSVLWYLLFNQGPSTWIGVPMNFVALGIFMAIVWFFTKKKFSIKNYTVGIVLATIAS
HHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VLVMMVLNVFYALPLYRLAAGFDVDKIFAGATHLFNMGSLSVTLNPTYLLTVVLPFNALQ
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEHHHHHHHH
YIIFALVFGLIVTVFKKNKVVKFYNA
HHHHHHHHHHHHHHHHCCCEEEEECH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA