Click here to switch to the map view.

The map label for this gene is scpA [H]

Identifier: 125624022

GI number: 125624022

Start: 1162320

End: 1163048

Strand: Direct

Name: scpA [H]

Synonym: llmg_1192

Alternate gene names: 125624022

Gene position: 1162320-1163048 (Clockwise)

Preceding gene: 125624021

Following gene: 125624023

Centisome position: 45.95

GC content: 31.55

Gene sequence:

>729_bases
ATGATCAAAGAAATCAATATAAAAATTAAAAACTTTGAGGGTCCGCTTGATCTTCTCTTACATTTAGTTAGTCAGTACGA
AATGGACATCTTTGAAGTCCCTTTAGTACCGGTGATTGAACAGTACCTTATCTATATCCAAACGATGAAAGAACTTGAGT
TGGAGTTGGCTGGTGAATATATGCTGATGGCAAGTCAGTTGATGTTGATAAAATCAAGAAGACTTTTGCCAACGGTGACC
GAAACTTTTATAGAAGATACCGAGCAGCTTGAATATGATTTATTAGCTCAAATCGACGAATATCGGAAGTATAAAATGCT
TTCAGAGGATTTGGACGAATTACATCAAGAACGTAGTCATTATTATTCTAAATCGAAAACTGAAATCATCACAGATGAGA
CAGTCTTATTGCAAGATAAAACGGCATTGGATTTGTTCTTAGCCTTTAGTAAAATTTTGGAATTACAAAGGCAACAAATT
GAAGATGATAATACAATGATTGCAGCTGAAAAATTTACGATTGCGGATAAAATTTTTGAATTAAATCAAAAATTTACAGA
ACAAAAAATATGTAAATTTACAGATTTATTTTCAGATAAAACCAATAAAGATGAACTCGTCACAACATTTATGGCTCTTC
TAGAATTGATTAAAAATCAGCAAGTTTCTTTTTCCCAAGGAGAGCTCTTTGGAGAAATTATTTTAGAAAGAAAAGAAATT
AGTGAATAA

Upstream 100 bases:

>100_bases
AACAATATATGAGTTGGCTAACTTACTTGGCTTAAGCACAATTACTACCTTAGAAAAATATTATAGATAGGATTTTTACA
CTATTTTAATTATGTAAATT

Downstream 100 bases:

>100_bases
GACAGCGACATGTGAACTTTTACTTTTTGTATCTGGAGAAGCTGGTTTAACATTGACAGAGTTGTCATCACTGACAGAAA
TGTCTAAACAAGCTTGTCAG

Product: segregation and condensation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MIKEINIKIKNFEGPLDLLLHLVSQYEMDIFEVPLVPVIEQYLIYIQTMKELELELAGEYMLMASQLMLIKSRRLLPTVT
ETFIEDTEQLEYDLLAQIDEYRKYKMLSEDLDELHQERSHYYSKSKTEIITDETVLLQDKTALDLFLAFSKILELQRQQI
EDDNTMIAAEKFTIADKIFELNQKFTEQKICKFTDLFSDKTNKDELVTTFMALLELIKNQQVSFSQGELFGEIILERKEI
SE

Sequences:

>Translated_242_residues
MIKEINIKIKNFEGPLDLLLHLVSQYEMDIFEVPLVPVIEQYLIYIQTMKELELELAGEYMLMASQLMLIKSRRLLPTVT
ETFIEDTEQLEYDLLAQIDEYRKYKMLSEDLDELHQERSHYYSKSKTEIITDETVLLQDKTALDLFLAFSKILELQRQQI
EDDNTMIAAEKFTIADKIFELNQKFTEQKICKFTDLFSDKTNKDELVTTFMALLELIKNQQVSFSQGELFGEIILERKEI
SE
>Mature_242_residues
MIKEINIKIKNFEGPLDLLLHLVSQYEMDIFEVPLVPVIEQYLIYIQTMKELELELAGEYMLMASQLMLIKSRRLLPTVT
ETFIEDTEQLEYDLLAQIDEYRKYKMLSEDLDELHQERSHYYSKSKTEIITDETVLLQDKTALDLFLAFSKILELQRQQI
EDDNTMIAAEKFTIADKIFELNQKFTEQKICKFTDLFSDKTNKDELVTTFMALLELIKNQQVSFSQGELFGEIILERKEI
SE

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023093
- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 28563; Mature: 28563

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKEINIKIKNFEGPLDLLLHLVSQYEMDIFEVPLVPVIEQYLIYIQTMKELELELAGEY
CCCEEEEEEECCCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MLMASQLMLIKSRRLLPTVTETFIEDTEQLEYDLLAQIDEYRKYKMLSEDLDELHQERSH
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYSKSKTEIITDETVLLQDKTALDLFLAFSKILELQRQQIEDDNTMIAAEKFTIADKIFE
HHCCCCCEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHH
LNQKFTEQKICKFTDLFSDKTNKDELVTTFMALLELIKNQQVSFSQGELFGEIILERKEI
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
SE
CC
>Mature Secondary Structure
MIKEINIKIKNFEGPLDLLLHLVSQYEMDIFEVPLVPVIEQYLIYIQTMKELELELAGEY
CCCEEEEEEECCCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MLMASQLMLIKSRRLLPTVTETFIEDTEQLEYDLLAQIDEYRKYKMLSEDLDELHQERSH
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYSKSKTEIITDETVLLQDKTALDLFLAFSKILELQRQQIEDDNTMIAAEKFTIADKIFE
HHCCCCCEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHH
LNQKFTEQKICKFTDLFSDKTNKDELVTTFMALLELIKNQQVSFSQGELFGEIILERKEI
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
SE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]