| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485608
Identifier: 124485608
GI number: 124485608
Start: 768722
End: 769327
Strand: Reverse
Name: 124485608
Synonym: Mlab_0786
Alternate gene names: NA
Gene position: 769327-768722 (Counterclockwise)
Preceding gene: 124485609
Following gene: 124485607
Centisome position: 42.62
GC content: 49.17
Gene sequence:
>606_bases ATGGACGAATACGAACATCTCATTGAAGACACTCCTTTGGTGCAAAACGACCGCTTTGCCGAGGAAGACCGCAGCGAAGA GATAAACAAGTATCAGAAATTCAAAAAAGTTGACGGAGCCACCTATCGAAAAGTCAACGTCTTCCTCAGAAAAAGAACCT ATATAACCGCCCGGGAATGGGCGATCGCACGCCTCTGTTCCGACTTCAAAACACCGTACGGCGCAGAGATGACGTTCATC GGAGAACACCTTCCCGAACTCTGTCCGTTTATGGAAGAAACATACAGCCCCCAGGCCGTCAATCAGGCACGCAACTCGTT CAAAAGAAAGGTCAGAAAATCAGGAGCGACCTTCTTCTACGGAGCGATGTGCGGGTTTTTCACACTCGATGAACTCGATG ACATCCTCTTCGAATCAAGCGAAGTCGCCAGATTCCTGCTGGAGATCGAAGGAACATCCCTGGAAATCGATGATGAGATC GACATCGAAGACAAGATCAGCGAGATCATGCGTAAACTCGGCGAATCCGCAAACGTGCTTTTAAGCAGCAGACGCGGCGA ATCCGAAAGCGATGACGAGGAAGATGAAGACGAAGACGCACTATAA
Upstream 100 bases:
>100_bases ACATGAAATAAACCATATGATGCGATATGAAAAATGACCTGCATTTCCAAACCGGCAAACCCTAAAATATACTTAGAACC CCTATATTCTGATAACAGCA
Downstream 100 bases:
>100_bases TATCTAACCCGCCTCTTTTTCTCAACCCTTATAATTATAAACCGCCCATACTCTTACACAGACGGTTGTAAATATGGCAT TCGAAAAACGCGAGAAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MDEYEHLIEDTPLVQNDRFAEEDRSEEINKYQKFKKVDGATYRKVNVFLRKRTYITAREWAIARLCSDFKTPYGAEMTFI GEHLPELCPFMEETYSPQAVNQARNSFKRKVRKSGATFFYGAMCGFFTLDELDDILFESSEVARFLLEIEGTSLEIDDEI DIEDKISEIMRKLGESANVLLSSRRGESESDDEEDEDEDAL
Sequences:
>Translated_201_residues MDEYEHLIEDTPLVQNDRFAEEDRSEEINKYQKFKKVDGATYRKVNVFLRKRTYITAREWAIARLCSDFKTPYGAEMTFI GEHLPELCPFMEETYSPQAVNQARNSFKRKVRKSGATFFYGAMCGFFTLDELDDILFESSEVARFLLEIEGTSLEIDDEI DIEDKISEIMRKLGESANVLLSSRRGESESDDEEDEDEDAL >Mature_201_residues MDEYEHLIEDTPLVQNDRFAEEDRSEEINKYQKFKKVDGATYRKVNVFLRKRTYITAREWAIARLCSDFKTPYGAEMTFI GEHLPELCPFMEETYSPQAVNQARNSFKRKVRKSGATFFYGAMCGFFTLDELDDILFESSEVARFLLEIEGTSLEIDDEI DIEDKISEIMRKLGESANVLLSSRRGESESDDEEDEDEDAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23352; Mature: 23352
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEYEHLIEDTPLVQNDRFAEEDRSEEINKYQKFKKVDGATYRKVNVFLRKRTYITAREW CCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH AIARLCSDFKTPYGAEMTFIGEHLPELCPFMEETYSPQAVNQARNSFKRKVRKSGATFFY HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHH GAMCGFFTLDELDDILFESSEVARFLLEIEGTSLEIDDEIDIEDKISEIMRKLGESANVL HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCHHHHH LSSRRGESESDDEEDEDEDAL HHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDEYEHLIEDTPLVQNDRFAEEDRSEEINKYQKFKKVDGATYRKVNVFLRKRTYITAREW CCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH AIARLCSDFKTPYGAEMTFIGEHLPELCPFMEETYSPQAVNQARNSFKRKVRKSGATFFY HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHH GAMCGFFTLDELDDILFESSEVARFLLEIEGTSLEIDDEIDIEDKISEIMRKLGESANVL HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCHHHHH LSSRRGESESDDEEDEDEDAL HHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA