Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485608

Identifier: 124485608

GI number: 124485608

Start: 768722

End: 769327

Strand: Reverse

Name: 124485608

Synonym: Mlab_0786

Alternate gene names: NA

Gene position: 769327-768722 (Counterclockwise)

Preceding gene: 124485609

Following gene: 124485607

Centisome position: 42.62

GC content: 49.17

Gene sequence:

>606_bases
ATGGACGAATACGAACATCTCATTGAAGACACTCCTTTGGTGCAAAACGACCGCTTTGCCGAGGAAGACCGCAGCGAAGA
GATAAACAAGTATCAGAAATTCAAAAAAGTTGACGGAGCCACCTATCGAAAAGTCAACGTCTTCCTCAGAAAAAGAACCT
ATATAACCGCCCGGGAATGGGCGATCGCACGCCTCTGTTCCGACTTCAAAACACCGTACGGCGCAGAGATGACGTTCATC
GGAGAACACCTTCCCGAACTCTGTCCGTTTATGGAAGAAACATACAGCCCCCAGGCCGTCAATCAGGCACGCAACTCGTT
CAAAAGAAAGGTCAGAAAATCAGGAGCGACCTTCTTCTACGGAGCGATGTGCGGGTTTTTCACACTCGATGAACTCGATG
ACATCCTCTTCGAATCAAGCGAAGTCGCCAGATTCCTGCTGGAGATCGAAGGAACATCCCTGGAAATCGATGATGAGATC
GACATCGAAGACAAGATCAGCGAGATCATGCGTAAACTCGGCGAATCCGCAAACGTGCTTTTAAGCAGCAGACGCGGCGA
ATCCGAAAGCGATGACGAGGAAGATGAAGACGAAGACGCACTATAA

Upstream 100 bases:

>100_bases
ACATGAAATAAACCATATGATGCGATATGAAAAATGACCTGCATTTCCAAACCGGCAAACCCTAAAATATACTTAGAACC
CCTATATTCTGATAACAGCA

Downstream 100 bases:

>100_bases
TATCTAACCCGCCTCTTTTTCTCAACCCTTATAATTATAAACCGCCCATACTCTTACACAGACGGTTGTAAATATGGCAT
TCGAAAAACGCGAGAAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MDEYEHLIEDTPLVQNDRFAEEDRSEEINKYQKFKKVDGATYRKVNVFLRKRTYITAREWAIARLCSDFKTPYGAEMTFI
GEHLPELCPFMEETYSPQAVNQARNSFKRKVRKSGATFFYGAMCGFFTLDELDDILFESSEVARFLLEIEGTSLEIDDEI
DIEDKISEIMRKLGESANVLLSSRRGESESDDEEDEDEDAL

Sequences:

>Translated_201_residues
MDEYEHLIEDTPLVQNDRFAEEDRSEEINKYQKFKKVDGATYRKVNVFLRKRTYITAREWAIARLCSDFKTPYGAEMTFI
GEHLPELCPFMEETYSPQAVNQARNSFKRKVRKSGATFFYGAMCGFFTLDELDDILFESSEVARFLLEIEGTSLEIDDEI
DIEDKISEIMRKLGESANVLLSSRRGESESDDEEDEDEDAL
>Mature_201_residues
MDEYEHLIEDTPLVQNDRFAEEDRSEEINKYQKFKKVDGATYRKVNVFLRKRTYITAREWAIARLCSDFKTPYGAEMTFI
GEHLPELCPFMEETYSPQAVNQARNSFKRKVRKSGATFFYGAMCGFFTLDELDDILFESSEVARFLLEIEGTSLEIDDEI
DIEDKISEIMRKLGESANVLLSSRRGESESDDEEDEDEDAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23352; Mature: 23352

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEYEHLIEDTPLVQNDRFAEEDRSEEINKYQKFKKVDGATYRKVNVFLRKRTYITAREW
CCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
AIARLCSDFKTPYGAEMTFIGEHLPELCPFMEETYSPQAVNQARNSFKRKVRKSGATFFY
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHH
GAMCGFFTLDELDDILFESSEVARFLLEIEGTSLEIDDEIDIEDKISEIMRKLGESANVL
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCHHHHH
LSSRRGESESDDEEDEDEDAL
HHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDEYEHLIEDTPLVQNDRFAEEDRSEEINKYQKFKKVDGATYRKVNVFLRKRTYITAREW
CCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
AIARLCSDFKTPYGAEMTFIGEHLPELCPFMEETYSPQAVNQARNSFKRKVRKSGATFFY
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHH
GAMCGFFTLDELDDILFESSEVARFLLEIEGTSLEIDDEIDIEDKISEIMRKLGESANVL
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCHHHHH
LSSRRGESESDDEEDEDEDAL
HHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA