| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is glmM [H]
Identifier: 124485607
GI number: 124485607
Start: 767272
End: 768648
Strand: Reverse
Name: glmM [H]
Synonym: Mlab_0785
Alternate gene names: 124485607
Gene position: 768648-767272 (Counterclockwise)
Preceding gene: 124485608
Following gene: 124485605
Centisome position: 42.59
GC content: 54.83
Gene sequence:
>1377_bases ATGGCATTCGAAAAACGCGAGAAGAAATACTTTGGTACAAACGGTGTCCGCGGAGTGACCGGAGTCGATATGACCCCGGT ATTTGCTCTCAGTGTCGCCGAGGCATTCGGAACAATGCTCGGCGAAGGCAAAAAGGTGGGGGTCGGCCGCGACACCAGAA CCTCGGGACCTGCGCTGAGTTCTGCGGTCCGCTCAGGGCTTATGGCATGCGGATGCGACGTTGTCGACTTCGATGTGATC CCGACACCGGGCCTCCAGTACCTCGTTCTTGATCACAAACTTGACGGCGGTGTCATGATCACCGCATCCCACAACCCGCC CGAGTACAACGGCATAAAAATCATCGAAGCTGACGGAACCGAGATGGGAGACGAACGAACACTCGAACTCGAAGAGCTCA TGATCCAAAACGGCTCGGTCGTCTCCGCCTGGGACAAAGTCGGTGAATGCACGGAAGAACCAGAGGCACGTAAACTCTAT ATCGATTCAATCGTCGCACAGTTCCCAAAAGACTGCGGCAAAGGGATAACGGTCGTTGTCGATCCGGGAAACGGTCCGGC AGCCGCTACGACCCCCGAAATCCTGCGCAGACTTGGATGTAATGTTCACACCATCAATGCCGAGTTCAACGGACTCTTCC CGGGCAGACTTCCCGAACCGAGTCCTGAAGGACTTGCAAATCTCTCAGCCCTGGTCCAGGCAACCGGCGCAGCATTCGGA GTGGCGCACGACGGGGATGCGGATCGGGCGATCTTCGTTGATGAAAACGGGACTTTCATGGACGGAAACATCACGTTTGC CCTGCTCGCCTCCTACTTCTGCGAGAAAAACCCAGGAGGTACGATCGTAACTCCGGTCAGCACATCCGGCATCGTCGAAG AAGTCGGGAAAAAATACAACTGCACGACCACCTACACGGTTGTCGGGAGCATCTACGTGGCACGGACCATGCGCGAACTC ATCGCAAACGGAGAAAATGTCGTCATCGGCGGGGAAGGAAACGGCGGGATCATTTATCCAAAGCACCAGTTCTGCAGAGA CGGCGGAATGAGCGCTGCAACGATGCTCGGATTTGTTGCCGGAAAGACCGAGCCGCTTTCAAAACTCATCGCAGAACTTC CGTCATTCACCATGTATCAGGAAAAACGAAAAACCGCACAGGCAAAAGAGATCGTAATCCATATGAAAACCTATTTTGCG GACTGCCCGATCGACGACCGTGATGGGATGCGGATAACACGCGGCGGGGCATGGGCCTTGATCAGACCATCCGGAACGGA ACCGCTGGTCAGGGTCTTTGCCGAGTCACAGGATCCGGCAGAAGCGAAAACCCTGCTCGATGAAATTTTTGCCGAGATAA AACCCTATCTCGAATAA
Upstream 100 bases:
>100_bases GAAGATGAAGACGAAGACGCACTATAATATCTAACCCGCCTCTTTTTCTCAACCCTTATAATTATAAACCGCCCATACTC TTACACAGACGGTTGTAAAT
Downstream 100 bases:
>100_bases CTTTTTTTATCCGGACATCCTGATGAAAAAGAGGGATGGCCTATAATTTTCGGATAGTGATTACCGCTGCTCCCATTGTA ATTCCTGCTAGAAGAATGGA
Product: alpha-phosphoglucomutase / phosphomannomutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MAFEKREKKYFGTNGVRGVTGVDMTPVFALSVAEAFGTMLGEGKKVGVGRDTRTSGPALSSAVRSGLMACGCDVVDFDVI PTPGLQYLVLDHKLDGGVMITASHNPPEYNGIKIIEADGTEMGDERTLELEELMIQNGSVVSAWDKVGECTEEPEARKLY IDSIVAQFPKDCGKGITVVVDPGNGPAAATTPEILRRLGCNVHTINAEFNGLFPGRLPEPSPEGLANLSALVQATGAAFG VAHDGDADRAIFVDENGTFMDGNITFALLASYFCEKNPGGTIVTPVSTSGIVEEVGKKYNCTTTYTVVGSIYVARTMREL IANGENVVIGGEGNGGIIYPKHQFCRDGGMSAATMLGFVAGKTEPLSKLIAELPSFTMYQEKRKTAQAKEIVIHMKTYFA DCPIDDRDGMRITRGGAWALIRPSGTEPLVRVFAESQDPAEAKTLLDEIFAEIKPYLE
Sequences:
>Translated_458_residues MAFEKREKKYFGTNGVRGVTGVDMTPVFALSVAEAFGTMLGEGKKVGVGRDTRTSGPALSSAVRSGLMACGCDVVDFDVI PTPGLQYLVLDHKLDGGVMITASHNPPEYNGIKIIEADGTEMGDERTLELEELMIQNGSVVSAWDKVGECTEEPEARKLY IDSIVAQFPKDCGKGITVVVDPGNGPAAATTPEILRRLGCNVHTINAEFNGLFPGRLPEPSPEGLANLSALVQATGAAFG VAHDGDADRAIFVDENGTFMDGNITFALLASYFCEKNPGGTIVTPVSTSGIVEEVGKKYNCTTTYTVVGSIYVARTMREL IANGENVVIGGEGNGGIIYPKHQFCRDGGMSAATMLGFVAGKTEPLSKLIAELPSFTMYQEKRKTAQAKEIVIHMKTYFA DCPIDDRDGMRITRGGAWALIRPSGTEPLVRVFAESQDPAEAKTLLDEIFAEIKPYLE >Mature_457_residues AFEKREKKYFGTNGVRGVTGVDMTPVFALSVAEAFGTMLGEGKKVGVGRDTRTSGPALSSAVRSGLMACGCDVVDFDVIP TPGLQYLVLDHKLDGGVMITASHNPPEYNGIKIIEADGTEMGDERTLELEELMIQNGSVVSAWDKVGECTEEPEARKLYI DSIVAQFPKDCGKGITVVVDPGNGPAAATTPEILRRLGCNVHTINAEFNGLFPGRLPEPSPEGLANLSALVQATGAAFGV AHDGDADRAIFVDENGTFMDGNITFALLASYFCEKNPGGTIVTPVSTSGIVEEVGKKYNCTTTYTVVGSIYVARTMRELI ANGENVVIGGEGNGGIIYPKHQFCRDGGMSAATMLGFVAGKTEPLSKLIAELPSFTMYQEKRKTAQAKEIVIHMKTYFAD CPIDDRDGMRITRGGAWALIRPSGTEPLVRVFAESQDPAEAKTLLDEIFAEIKPYLE
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1789566, Length=454, Percent_Identity=31.4977973568282, Blast_Score=160, Evalue=2e-40, Organism=Escherichia coli, GI1788361, Length=438, Percent_Identity=27.6255707762557, Blast_Score=145, Evalue=7e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 49013; Mature: 48882
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFEKREKKYFGTNGVRGVTGVDMTPVFALSVAEAFGTMLGEGKKVGVGRDTRTSGPALS CCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHH SAVRSGLMACGCDVVDFDVIPTPGLQYLVLDHKLDGGVMITASHNPPEYNGIKIIEADGT HHHHHCHHHCCCCEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCEEEEECCCC EMGDERTLELEELMIQNGSVVSAWDKVGECTEEPEARKLYIDSIVAQFPKDCGKGITVVV CCCCCCCHHHHHHHHCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE DPGNGPAAATTPEILRRLGCNVHTINAEFNGLFPGRLPEPSPEGLANLSALVQATGAAFG ECCCCCCCCCCHHHHHHHCCCEEEECCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEE VAHDGDADRAIFVDENGTFMDGNITFALLASYFCEKNPGGTIVTPVSTSGIVEEVGKKYN ECCCCCCCCEEEECCCCCEEECCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHCCCCC CTTTYTVVGSIYVARTMRELIANGENVVIGGEGNGGIIYPKHQFCRDGGMSAATMLGFVA CEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCHHHHHCCCCHHHHHHHHHC GKTEPLSKLIAELPSFTMYQEKRKTAQAKEIVIHMKTYFADCPIDDRDGMRITRGGAWAL CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEHHHCCCCCCCCCCCEEECCCEEEE IRPSGTEPLVRVFAESQDPAEAKTLLDEIFAEIKPYLE ECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AFEKREKKYFGTNGVRGVTGVDMTPVFALSVAEAFGTMLGEGKKVGVGRDTRTSGPALS CCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHH SAVRSGLMACGCDVVDFDVIPTPGLQYLVLDHKLDGGVMITASHNPPEYNGIKIIEADGT HHHHHCHHHCCCCEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCEEEEECCCC EMGDERTLELEELMIQNGSVVSAWDKVGECTEEPEARKLYIDSIVAQFPKDCGKGITVVV CCCCCCCHHHHHHHHCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE DPGNGPAAATTPEILRRLGCNVHTINAEFNGLFPGRLPEPSPEGLANLSALVQATGAAFG ECCCCCCCCCCHHHHHHHCCCEEEECCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEE VAHDGDADRAIFVDENGTFMDGNITFALLASYFCEKNPGGTIVTPVSTSGIVEEVGKKYN ECCCCCCCCEEEECCCCCEEECCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHCCCCC CTTTYTVVGSIYVARTMRELIANGENVVIGGEGNGGIIYPKHQFCRDGGMSAATMLGFVA CEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCHHHHHCCCCHHHHHHHHHC GKTEPLSKLIAELPSFTMYQEKRKTAQAKEIVIHMKTYFADCPIDDRDGMRITRGGAWAL CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEHHHCCCCCCCCCCCEEECCCEEEE IRPSGTEPLVRVFAESQDPAEAKTLLDEIFAEIKPYLE ECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11930014 [H]