| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485513
Identifier: 124485513
GI number: 124485513
Start: 662561
End: 664357
Strand: Reverse
Name: 124485513
Synonym: Mlab_0690
Alternate gene names: NA
Gene position: 664357-662561 (Counterclockwise)
Preceding gene: 124485514
Following gene: 124485512
Centisome position: 36.81
GC content: 47.08
Gene sequence:
>1797_bases ATGATCAAATCTTTTAGAAAAACGAGGACTGATGCTCCATACGGAAAAAGACGGAAACTCTTCAAAGAGAGGGGTCATCA TCAAAACCCTGGTGAAAAAATGACACGGCATGTAATTTCGGGTGTCAGTATAATTGCATTACTCCTATTTTGCATTTGTA CCTCCGGGTGTGTTATATCTGCACAAAATACAACCGAACTGCAGCCGGTTTCCGCTGAACACATCAGTGAGATGGATGCG GCCCTTTATCCGCTCACGCATTTGATCACCAAAGAGATGGAGCAAGCGTGCTGTTTAGTGTGGAAAACCGCGAGAGACCT TGACGGCGTACCAATCGATGATCCGAAAGTCGAGCTTGCACTTCTGAAATTGAGACGGGACATCCCGTTTTCGTTCGAAG CAGGACTGTTTGATACAAATAACACGCTCATTGCGTCAACTGAAGATCTCAGTCAAACCATGGAGATCGGTGTCAGCAAG GCAACAACCCATTATACCAAAGAGGATTACCAGGCCGCAGGATCACAGTGCATAATATCAGGATACTCGCGTTTGCTCAA TAATGAAAGCGGGATCGTGATCACTGCGCCGTTGTATGATGCAGAGGGTACGTTTAACGGTACTCTACGGGTCGGGATCA ATACATGGGCGCTTTTTGCCGGACTCAATGAATACGTCAGACACATATATGGATACACATTGTGGGTCGCTCAAAATGAC GGCATAGTGATTTATGATAAGGACTCGCAGGAGATCGGTAAAAACATATTTACTGATTCCTTGTATCAGAGCGACACCTT ACAGAATGCAGCGAAGATAATTATTGATTCTTCGTCTGGAAATGTCTCGTATCTGTTCTATGACTCCACGTGGGTCGACA TGATCCAGATCAACGCGGTCTGGGACACGGTGTATCCAGGATACGGCATGGAGTGGAGGATGGTCGTTACCGACAATGCC GAAGTGAAGACCACAAACGAGACAAAAACAAACCTGACGATAGAAGATCTGAAAAGTTTTGTCGAGAAGGCGTATGTCTA TGCTCAGACCCATACCAAAGAAGAGGCCTTGAATGCGTTCAATGATCAAGAAGGTGAGTTCGTCAATGGGGAGCAGTATA TCTTTGCATACAGCATGGATGGAGAAGTGTTGGCTCTACCCTATCAGCCAGGCCTTATCGGCGAAGACCGATTTTTCATG GAGGACCCAAATGGAGTCAAGGTTCTGCATAGAGTGATCGCCAGAGCAAAACAGGGAGGAGGGTATGTCTGTTATCTGTA TCCAAACCCGGATCATGACTTTGCGCAGGAGTTCAAACTTTCCTATGTTATGCCGGTGGATGATACGTGGTTGATCGGAT CTGGCATATATATACAGGAAAACCCCTTGTCCCAGGACCAGTACATCTCCTGGACCGAACACGAGGATTTGACGTATCAG GTGAGAAACATGCAGTATCTTGCGAAGACGGAAGGAATCGAATCGGTGATTGAGATGATCAAGGATCCAAACAGTGAACT GCAGATCGAAGGATTATATCCGTTTGCCGTCACGGAAAACGGAATTGACCTTGCGGATGCGATGAACCCGGAGATGGCGG GAACTAACCAGCTGGGCATGATAAATTCGCTTGGAATGTCGATAGCCCGCGAGGTCATTTCCCTTGCCCAGGCAGGCGGG GGATGGATGTATTGTCTCTGGGGTATCCCGCCCTCAAACGAAGAACAGTACGTGCTGATCTATGTTGAACCGGCTAATGC CTCGGTGTATCTAGGTAGTCTCATAATTCTCGAGTGA
Upstream 100 bases:
>100_bases GAAAAACAAAAAGAGGTGTTTGTTCTGGATTATGTGGAGCCGGCAGGGAACGACACCTACTTTGCCAGTTATATGATCCT GGAGTGAGTGGAGGCGGAAA
Downstream 100 bases:
>100_bases ACGTAAATGGTTATCCGCTACAAGAAAACAAGCCCAAAACAGAGAAGGATAGTTATGGCGATATCTCTCGTGATAACCAT CATCGTGATCCTGGTTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Cache Type 2 Domain-Containing Protein; Sensor Histidine Kinase; Signal Transduction Histidine Kinase-Like; Histidine Kinase; Methyl-Accepting Chemotaxis Protein
Number of amino acids: Translated: 598; Mature: 598
Protein sequence:
>598_residues MIKSFRKTRTDAPYGKRRKLFKERGHHQNPGEKMTRHVISGVSIIALLLFCICTSGCVISAQNTTELQPVSAEHISEMDA ALYPLTHLITKEMEQACCLVWKTARDLDGVPIDDPKVELALLKLRRDIPFSFEAGLFDTNNTLIASTEDLSQTMEIGVSK ATTHYTKEDYQAAGSQCIISGYSRLLNNESGIVITAPLYDAEGTFNGTLRVGINTWALFAGLNEYVRHIYGYTLWVAQND GIVIYDKDSQEIGKNIFTDSLYQSDTLQNAAKIIIDSSSGNVSYLFYDSTWVDMIQINAVWDTVYPGYGMEWRMVVTDNA EVKTTNETKTNLTIEDLKSFVEKAYVYAQTHTKEEALNAFNDQEGEFVNGEQYIFAYSMDGEVLALPYQPGLIGEDRFFM EDPNGVKVLHRVIARAKQGGGYVCYLYPNPDHDFAQEFKLSYVMPVDDTWLIGSGIYIQENPLSQDQYISWTEHEDLTYQ VRNMQYLAKTEGIESVIEMIKDPNSELQIEGLYPFAVTENGIDLADAMNPEMAGTNQLGMINSLGMSIAREVISLAQAGG GWMYCLWGIPPSNEEQYVLIYVEPANASVYLGSLIILE
Sequences:
>Translated_598_residues MIKSFRKTRTDAPYGKRRKLFKERGHHQNPGEKMTRHVISGVSIIALLLFCICTSGCVISAQNTTELQPVSAEHISEMDA ALYPLTHLITKEMEQACCLVWKTARDLDGVPIDDPKVELALLKLRRDIPFSFEAGLFDTNNTLIASTEDLSQTMEIGVSK ATTHYTKEDYQAAGSQCIISGYSRLLNNESGIVITAPLYDAEGTFNGTLRVGINTWALFAGLNEYVRHIYGYTLWVAQND GIVIYDKDSQEIGKNIFTDSLYQSDTLQNAAKIIIDSSSGNVSYLFYDSTWVDMIQINAVWDTVYPGYGMEWRMVVTDNA EVKTTNETKTNLTIEDLKSFVEKAYVYAQTHTKEEALNAFNDQEGEFVNGEQYIFAYSMDGEVLALPYQPGLIGEDRFFM EDPNGVKVLHRVIARAKQGGGYVCYLYPNPDHDFAQEFKLSYVMPVDDTWLIGSGIYIQENPLSQDQYISWTEHEDLTYQ VRNMQYLAKTEGIESVIEMIKDPNSELQIEGLYPFAVTENGIDLADAMNPEMAGTNQLGMINSLGMSIAREVISLAQAGG GWMYCLWGIPPSNEEQYVLIYVEPANASVYLGSLIILE >Mature_598_residues MIKSFRKTRTDAPYGKRRKLFKERGHHQNPGEKMTRHVISGVSIIALLLFCICTSGCVISAQNTTELQPVSAEHISEMDA ALYPLTHLITKEMEQACCLVWKTARDLDGVPIDDPKVELALLKLRRDIPFSFEAGLFDTNNTLIASTEDLSQTMEIGVSK ATTHYTKEDYQAAGSQCIISGYSRLLNNESGIVITAPLYDAEGTFNGTLRVGINTWALFAGLNEYVRHIYGYTLWVAQND GIVIYDKDSQEIGKNIFTDSLYQSDTLQNAAKIIIDSSSGNVSYLFYDSTWVDMIQINAVWDTVYPGYGMEWRMVVTDNA EVKTTNETKTNLTIEDLKSFVEKAYVYAQTHTKEEALNAFNDQEGEFVNGEQYIFAYSMDGEVLALPYQPGLIGEDRFFM EDPNGVKVLHRVIARAKQGGGYVCYLYPNPDHDFAQEFKLSYVMPVDDTWLIGSGIYIQENPLSQDQYISWTEHEDLTYQ VRNMQYLAKTEGIESVIEMIKDPNSELQIEGLYPFAVTENGIDLADAMNPEMAGTNQLGMINSLGMSIAREVISLAQAGG GWMYCLWGIPPSNEEQYVLIYVEPANASVYLGSLIILE
Specific function: Unknown
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67106; Mature: 67106
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKSFRKTRTDAPYGKRRKLFKERGHHQNPGEKMTRHVISGVSIIALLLFCICTSGCVIS CCCCHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE AQNTTELQPVSAEHISEMDAALYPLTHLITKEMEQACCLVWKTARDLDGVPIDDPKVELA ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH LLKLRRDIPFSFEAGLFDTNNTLIASTEDLSQTMEIGVSKATTHYTKEDYQAAGSQCIIS HHHHHHCCCCCCCCCEEECCCEEEEEHHHHHHHHHHCCCHHHHCCCHHHHHHCCCEEHHH GYSRLLNNESGIVITAPLYDAEGTFNGTLRVGINTWALFAGLNEYVRHIYGYTLWVAQND HHHHHHCCCCCEEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCEEEEEEECC GIVIYDKDSQEIGKNIFTDSLYQSDTLQNAAKIIIDSSSGNVSYLFYDSTWVDMIQINAV CEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCEEEEEEEEEE WDTVYPGYGMEWRMVVTDNAEVKTTNETKTNLTIEDLKSFVEKAYVYAQTHTKEEALNAF EECCCCCCCCEEEEEEECCCEEEECCCCCCCEEHHHHHHHHHHHEEEEECCCHHHHHHHC NDQEGEFVNGEQYIFAYSMDGEVLALPYQPGLIGEDRFFMEDPNGVKVLHRVIARAKQGG CCCCCCEECCCEEEEEEECCCCEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCC GYVCYLYPNPDHDFAQEFKLSYVMPVDDTWLIGSGIYIQENPLSQDQYISWTEHEDLTYQ CEEEEEECCCCHHHHHHCCEEEEECCCCCEEECCCEEEECCCCCCCCCEEECCCCCCEEE VRNMQYLAKTEGIESVIEMIKDPNSELQIEGLYPFAVTENGIDLADAMNPEMAGTNQLGM ECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHCCCCCCCCCCCCCH INSLGMSIAREVISLAQAGGGWMYCLWGIPPSNEEQYVLIYVEPANASVYLGSLIILE HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEECCCCEEEEEEEEEEC >Mature Secondary Structure MIKSFRKTRTDAPYGKRRKLFKERGHHQNPGEKMTRHVISGVSIIALLLFCICTSGCVIS CCCCHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE AQNTTELQPVSAEHISEMDAALYPLTHLITKEMEQACCLVWKTARDLDGVPIDDPKVELA ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH LLKLRRDIPFSFEAGLFDTNNTLIASTEDLSQTMEIGVSKATTHYTKEDYQAAGSQCIIS HHHHHHCCCCCCCCCEEECCCEEEEEHHHHHHHHHHCCCHHHHCCCHHHHHHCCCEEHHH GYSRLLNNESGIVITAPLYDAEGTFNGTLRVGINTWALFAGLNEYVRHIYGYTLWVAQND HHHHHHCCCCCEEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCEEEEEEECC GIVIYDKDSQEIGKNIFTDSLYQSDTLQNAAKIIIDSSSGNVSYLFYDSTWVDMIQINAV CEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCEEEEEEEEEE WDTVYPGYGMEWRMVVTDNAEVKTTNETKTNLTIEDLKSFVEKAYVYAQTHTKEEALNAF EECCCCCCCCEEEEEEECCCEEEECCCCCCCEEHHHHHHHHHHHEEEEECCCHHHHHHHC NDQEGEFVNGEQYIFAYSMDGEVLALPYQPGLIGEDRFFMEDPNGVKVLHRVIARAKQGG CCCCCCEECCCEEEEEEECCCCEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCC GYVCYLYPNPDHDFAQEFKLSYVMPVDDTWLIGSGIYIQENPLSQDQYISWTEHEDLTYQ CEEEEEECCCCHHHHHHCCEEEEECCCCCEEECCCEEEECCCCCCCCCEEECCCCCCEEE VRNMQYLAKTEGIESVIEMIKDPNSELQIEGLYPFAVTENGIDLADAMNPEMAGTNQLGM ECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHCCCCCCCCCCCCCH INSLGMSIAREVISLAQAGGGWMYCLWGIPPSNEEQYVLIYVEPANASVYLGSLIILE HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEECCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA