| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485491
Identifier: 124485491
GI number: 124485491
Start: 639667
End: 640257
Strand: Reverse
Name: 124485491
Synonym: Mlab_0668
Alternate gene names: NA
Gene position: 640257-639667 (Counterclockwise)
Preceding gene: 124485492
Following gene: 124485490
Centisome position: 35.47
GC content: 48.05
Gene sequence:
>591_bases ATGATACTACACGATGCTGTAAAAAAACTTCATGACGTTGCGCATGGAATGGGTACCGAAGACGGGGACCTTGTGTATAT TAGCAAACCTGAAAACCACATCTGTCAGTTCTGTTCGGGCAGCTGTCTTCAGGTTTGTTTTGGAGGACGGGTCGCCGAGA TTGCATCAACCGAACCTTTCTGCGCAAAGATGCGCCTTGAAAATCTCTATGATGCACCGCTGAAATCGCCGAAAACAAAA GCAGCTGCGGCAGGGGCGCTTACCGTAGTTACCGGTTTTCTGATGCTGATTCGAAACCTTGGTCCCTGTCCAACAGTGAA CTTCGAAGACTGCCATGAAGAACTGGTCCAGCATCTTTCCGGGAAAAATGTTTACATTCTCGGTAGTGACATTCCAGGGA TACAACAGGCCTTACTTCTGGAAGATGCCGACGTGGTTCTTGTGACCGGCGATGCACTTTTGAATACTGATCATCTCGAA GAAATAGATGAAGCAATCCTTCTGAAAAAAGAACTCCTATTTCTCGGGCCTTCATGTGCCGGCGTTGCCGCTCTTCTTGG AAAAAAGGCCTGGTGTCCCTATGGGACCTAA
Upstream 100 bases:
>100_bases CGAATATTCAGGATGGGGTGTATCGGATGGCAGCCCTGCCGCTGAAAATTGAGGGGGCAGATGCCTCGCCTGCAAGAGTT GTGTTACTTGAGGATAGAGT
Downstream 100 bases:
>100_bases TAATTTAACTCCATTCAGCACATAAAATAATTCATTATGCTTTTTGGTTCGTCCGGTATCAGACAATTGTTTGATCAGCA CCTACTTTCTCTTGCACCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MILHDAVKKLHDVAHGMGTEDGDLVYISKPENHICQFCSGSCLQVCFGGRVAEIASTEPFCAKMRLENLYDAPLKSPKTK AAAAGALTVVTGFLMLIRNLGPCPTVNFEDCHEELVQHLSGKNVYILGSDIPGIQQALLLEDADVVLVTGDALLNTDHLE EIDEAILLKKELLFLGPSCAGVAALLGKKAWCPYGT
Sequences:
>Translated_196_residues MILHDAVKKLHDVAHGMGTEDGDLVYISKPENHICQFCSGSCLQVCFGGRVAEIASTEPFCAKMRLENLYDAPLKSPKTK AAAAGALTVVTGFLMLIRNLGPCPTVNFEDCHEELVQHLSGKNVYILGSDIPGIQQALLLEDADVVLVTGDALLNTDHLE EIDEAILLKKELLFLGPSCAGVAALLGKKAWCPYGT >Mature_196_residues MILHDAVKKLHDVAHGMGTEDGDLVYISKPENHICQFCSGSCLQVCFGGRVAEIASTEPFCAKMRLENLYDAPLKSPKTK AAAAGALTVVTGFLMLIRNLGPCPTVNFEDCHEELVQHLSGKNVYILGSDIPGIQQALLLEDADVVLVTGDALLNTDHLE EIDEAILLKKELLFLGPSCAGVAALLGKKAWCPYGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21034; Mature: 21034
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILHDAVKKLHDVAHGMGTEDGDLVYISKPENHICQFCSGSCLQVCFGGRVAEIASTEPF CCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHCCCHHHHHHCCCHHHHHCCCHH CAKMRLENLYDAPLKSPKTKAAAAGALTVVTGFLMLIRNLGPCPTVNFEDCHEELVQHLS HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC GKNVYILGSDIPGIQQALLLEDADVVLVTGDALLNTDHLEEIDEAILLKKELLFLGPSCA CCEEEEEECCCCHHHHHHHHCCCCEEEEECCHHHCHHHHHHHHHHHHHHHHHHHCCCCHH GVAALLGKKAWCPYGT HHHHHHCCCCCCCCCC >Mature Secondary Structure MILHDAVKKLHDVAHGMGTEDGDLVYISKPENHICQFCSGSCLQVCFGGRVAEIASTEPF CCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHCCCHHHHHHCCCHHHHHCCCHH CAKMRLENLYDAPLKSPKTKAAAAGALTVVTGFLMLIRNLGPCPTVNFEDCHEELVQHLS HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC GKNVYILGSDIPGIQQALLLEDADVVLVTGDALLNTDHLEEIDEAILLKKELLFLGPSCA CCEEEEEECCCCHHHHHHHHCCCCEEEEECCHHHCHHHHHHHHHHHHHHHHHHHCCCCHH GVAALLGKKAWCPYGT HHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA