| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is glmM [H]
Identifier: 124485490
GI number: 124485490
Start: 638371
End: 639630
Strand: Reverse
Name: glmM [H]
Synonym: Mlab_0667
Alternate gene names: 124485490
Gene position: 639630-638371 (Counterclockwise)
Preceding gene: 124485491
Following gene: 124485489
Centisome position: 35.44
GC content: 50.63
Gene sequence:
>1260_bases ATGCTTTTTGGTTCGTCCGGTATCAGACAATTGTTTGATCAGCACCTACTTTCTCTTGCACCTATCGTTGGGGCGGCAGT TGCAAAAAATGCAAAACATGTCGTTCTTGGGACAGATTCACGAACCAGCAGAAATGTTCTCGCGCACGCCGTAATCTCGG GACTGATCAGCGGCGGAGCAGACGTTGTCTACGGAGGAATCTGTCCCACGCCGACCGTTGCCTTCGGCGCCGGATTTGCC GATGCGGGAGTTATGATCACGGCTTCACATAATCCGGAACCCTATAACGGCATCAAACTTTTCCGGTCCGACGGCTCGTC CTACACCCTCGCTCAGCAAAAAGAGATCGAAGAGGAAGTAGATTGCCCCGTCTGGAGCTCATGGGATGAGCAGGGTTCCT TTACGGATGCCGATCTAATTACGCCGCATAAAGAAGCGATCCTTACCTCGGTTTGCATTCCAGAAGATATCACCATAGTA GTGGATTGTGGAAACGGGGCCGGCGGGCAAATCACGCCGAAACTCTTTGAAGAGTCGGGAACGGCAGTTATTCCGGTAAA CTGCGATCCTTCAGGAAAGTTTGCCCGGCCATCCGAACCTCTGGAAAAAAATCTCCTGCACATCCCGAAACTGATGAAAA AAATCAATGCCGACTGTGCCGTCGTAAATGACGGAGATGCAGATCGGATGATGGCATTTGACAATCTGGGGCGGTATATC GACGGGGACCATCTGCTTATGCTTTTTGCAAAATATCTCGATGCAAAACAGGTTGTGACGACAGTTGATGCATCTATGGC GATCGAAGAGATCGCCGAAGTTCGGCGAACGCCGGTCGGTGATAGTTTTGTATCCGAGGAACTTATCTCATGGGGGACGT TCGGCGGGGAACCGTCGGGAAGCTGGATCTTTCCCAAGCACTCCCTTTGCCCTGACGGACCTTACGCTGCCGCACTTTTT GCCGAGATATCAGGTGAATGGAATGTTGCCGAGGAACTGGATGCGATGCCAAGATATACTATTCTTCGTGATGCTTTAGA GACAAAGAATGCAAAAGAGATCCTTTCCGGACTTGGCGCAGACAAACCAACTGACGGTATCCGAATCTCCGATGAAAACG GCTGGTGTCTGATTCGTGCAAGCGGAACCGAGCCGAAGATCCGCTGTACCGCTGAAGGAAGAACAAAAGACGATGCAAAA CGGATGCTGGAATCAGGTATGAACAAAATCCGTGATTCAATGCATCAGATCAGGGAGTAA
Upstream 100 bases:
>100_bases GCCTTCATGTGCCGGCGTTGCCGCTCTTCTTGGAAAAAAGGCCTGGTGTCCCTATGGGACCTAATAATTTAACTCCATTC AGCACATAAAATAATTCATT
Downstream 100 bases:
>100_bases TATATGCAGTGTGTAATTCTTGCAGCAGGTGAAGGTTCGCGTATGCGGCCCCTCACGACGTCCCGCCCGAAGGTTATGCT GCCTTTAGCGGGAAAGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MLFGSSGIRQLFDQHLLSLAPIVGAAVAKNAKHVVLGTDSRTSRNVLAHAVISGLISGGADVVYGGICPTPTVAFGAGFA DAGVMITASHNPEPYNGIKLFRSDGSSYTLAQQKEIEEEVDCPVWSSWDEQGSFTDADLITPHKEAILTSVCIPEDITIV VDCGNGAGGQITPKLFEESGTAVIPVNCDPSGKFARPSEPLEKNLLHIPKLMKKINADCAVVNDGDADRMMAFDNLGRYI DGDHLLMLFAKYLDAKQVVTTVDASMAIEEIAEVRRTPVGDSFVSEELISWGTFGGEPSGSWIFPKHSLCPDGPYAAALF AEISGEWNVAEELDAMPRYTILRDALETKNAKEILSGLGADKPTDGIRISDENGWCLIRASGTEPKIRCTAEGRTKDDAK RMLESGMNKIRDSMHQIRE
Sequences:
>Translated_419_residues MLFGSSGIRQLFDQHLLSLAPIVGAAVAKNAKHVVLGTDSRTSRNVLAHAVISGLISGGADVVYGGICPTPTVAFGAGFA DAGVMITASHNPEPYNGIKLFRSDGSSYTLAQQKEIEEEVDCPVWSSWDEQGSFTDADLITPHKEAILTSVCIPEDITIV VDCGNGAGGQITPKLFEESGTAVIPVNCDPSGKFARPSEPLEKNLLHIPKLMKKINADCAVVNDGDADRMMAFDNLGRYI DGDHLLMLFAKYLDAKQVVTTVDASMAIEEIAEVRRTPVGDSFVSEELISWGTFGGEPSGSWIFPKHSLCPDGPYAAALF AEISGEWNVAEELDAMPRYTILRDALETKNAKEILSGLGADKPTDGIRISDENGWCLIRASGTEPKIRCTAEGRTKDDAK RMLESGMNKIRDSMHQIRE >Mature_419_residues MLFGSSGIRQLFDQHLLSLAPIVGAAVAKNAKHVVLGTDSRTSRNVLAHAVISGLISGGADVVYGGICPTPTVAFGAGFA DAGVMITASHNPEPYNGIKLFRSDGSSYTLAQQKEIEEEVDCPVWSSWDEQGSFTDADLITPHKEAILTSVCIPEDITIV VDCGNGAGGQITPKLFEESGTAVIPVNCDPSGKFARPSEPLEKNLLHIPKLMKKINADCAVVNDGDADRMMAFDNLGRYI DGDHLLMLFAKYLDAKQVVTTVDASMAIEEIAEVRRTPVGDSFVSEELISWGTFGGEPSGSWIFPKHSLCPDGPYAAALF AEISGEWNVAEELDAMPRYTILRDALETKNAKEILSGLGADKPTDGIRISDENGWCLIRASGTEPKIRCTAEGRTKDDAK RMLESGMNKIRDSMHQIRE
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1789566, Length=429, Percent_Identity=29.6037296037296, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI1788361, Length=414, Percent_Identity=26.8115942028986, Blast_Score=98, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 45160; Mature: 45160
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFGSSGIRQLFDQHLLSLAPIVGAAVAKNAKHVVLGTDSRTSRNVLAHAVISGLISGGA CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC DVVYGGICPTPTVAFGAGFADAGVMITASHNPEPYNGIKLFRSDGSSYTLAQQKEIEEEV CEEECCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCEEHHHHHHHHHHH DCPVWSSWDEQGSFTDADLITPHKEAILTSVCIPEDITIVVDCGNGAGGQITPKLFEESG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHCCC TAVIPVNCDPSGKFARPSEPLEKNLLHIPKLMKKINADCAVVNDGDADRMMAFDNLGRYI CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCC DGDHLLMLFAKYLDAKQVVTTVDASMAIEEIAEVRRTPVGDSFVSEELISWGTFGGEPSG CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC SWIFPKHSLCPDGPYAAALFAEISGEWNVAEELDAMPRYTILRDALETKNAKEILSGLGA CEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCC DKPTDGIRISDENGWCLIRASGTEPKIRCTAEGRTKDDAKRMLESGMNKIRDSMHQIRE CCCCCCEEEECCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLFGSSGIRQLFDQHLLSLAPIVGAAVAKNAKHVVLGTDSRTSRNVLAHAVISGLISGGA CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC DVVYGGICPTPTVAFGAGFADAGVMITASHNPEPYNGIKLFRSDGSSYTLAQQKEIEEEV CEEECCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCEEHHHHHHHHHHH DCPVWSSWDEQGSFTDADLITPHKEAILTSVCIPEDITIVVDCGNGAGGQITPKLFEESG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHCCC TAVIPVNCDPSGKFARPSEPLEKNLLHIPKLMKKINADCAVVNDGDADRMMAFDNLGRYI CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCC DGDHLLMLFAKYLDAKQVVTTVDASMAIEEIAEVRRTPVGDSFVSEELISWGTFGGEPSG CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC SWIFPKHSLCPDGPYAAALFAEISGEWNVAEELDAMPRYTILRDALETKNAKEILSGLGA CEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCC DKPTDGIRISDENGWCLIRASGTEPKIRCTAEGRTKDDAKRMLESGMNKIRDSMHQIRE CCCCCCEEEECCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]