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The map label for this gene is rps27Ae

Identifier: 124485478

GI number: 124485478

Start: 626603

End: 626785

Strand: Reverse

Name: rps27Ae

Synonym: Mlab_0654

Alternate gene names: 124485478

Gene position: 626785-626603 (Counterclockwise)

Preceding gene: 124485479

Following gene: 124485477

Centisome position: 34.73

GC content: 54.1

Gene sequence:

>183_bases
ATGGCAGCGAAGAAGGTCGTCAAAGCGACACCAAAACGCAGCGAACTTTACACTGTTGATGCCCAGGGAAAAGCAACCAC
CTCTCACCGTGCATGCCCGCGCTGCGGAGCCGGTGTCTTCATGGGCGAACACAAAGACCGGTTTTCCTGCGGAAAGTGCG
GATACACCGAGTTTAAGCAATAA

Upstream 100 bases:

>100_bases
GCGTAGCCCGTATCTACGACACCCCCGAAGCACTCAAAGCAACTGAACGCGAGTTCCTGATTGCCCGCGGACAGCCCAAG
GCAGAAAAGGAGGAGTAAAA

Downstream 100 bases:

>100_bases
AATATTTTATCTATGCCCGAAAAAAGGGTCCTCGGCATTGAAGGAACTGCATGGAACTTCAGTGCCGCTGTTTTTGCAGA
AGATTTAGTTTGTCTTCACT

Product: SSU ribosomal protein S27AE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MAAKKVVKATPKRSELYTVDAQGKATTSHRACPRCGAGVFMGEHKDRFSCGKCGYTEFKQ

Sequences:

>Translated_60_residues
MAAKKVVKATPKRSELYTVDAQGKATTSHRACPRCGAGVFMGEHKDRFSCGKCGYTEFKQ
>Mature_59_residues
AAKKVVKATPKRSELYTVDAQGKATTSHRACPRCGAGVFMGEHKDRFSCGKCGYTEFKQ

Specific function: Unknown

COG id: COG1998

COG function: function code J; Ribosomal protein S27AE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S27Ae family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS27A_METLZ (A2SR71)

Other databases:

- EMBL:   CP000559
- RefSeq:   YP_001030094.1
- STRING:   A2SR71
- GeneID:   4795876
- GenomeReviews:   CP000559_GR
- KEGG:   mla:Mlab_0654
- eggNOG:   arNOG13277
- HOGENOM:   HBG512791
- OMA:   YCPRCGP
- PhylomeDB:   A2SR71
- BioCyc:   MLAB410358:MLAB_0654-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00777
- InterPro:   IPR011331
- InterPro:   IPR002906
- InterPro:   IPR022845
- Gene3D:   G3DSA:2.20.25.30

Pfam domain/function: PF01599 Ribosomal_S27

EC number: NA

Molecular weight: Translated: 6570; Mature: 6438

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAKKVVKATPKRSELYTVDAQGKATTSHRACPRCGAGVFMGEHKDRFSCGKCGYTEFKQ
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AAKKVVKATPKRSELYTVDAQGKATTSHRACPRCGAGVFMGEHKDRFSCGKCGYTEFKQ
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA