| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485422
Identifier: 124485422
GI number: 124485422
Start: 566853
End: 567224
Strand: Reverse
Name: 124485422
Synonym: Mlab_0597
Alternate gene names: NA
Gene position: 567224-566853 (Counterclockwise)
Preceding gene: 124485423
Following gene: 124485416
Centisome position: 31.43
GC content: 43.28
Gene sequence:
>372_bases ATGGTCTGTTATAGGCATTGCGTATCAAAAAAATCCTGCGGAGGGTGTTTTTCGAACAAAAACGGCACATCCGAGGAATG CAGGTCCTGCAGGATTCATGCTTGCGTTGGTGAGAAAGGGATAGAATACTGTTTTTCCTGCAAAATTTTTCCCTGTAAAC AGATAAAAAAGATGGATAAAAGATACAGGGACAGATATGATCAAAGTCTGATAGAAAACGGCCTTATGGCGAAAGAACAG GGTCTTGCAGCATTTCTCGCTGCTGAGCGGAGTAAATGGACCTGCGGAAAATGTGAGGGGATCATCTCGCTGCATGACAA TGAATGCAGCGAGTGTCAGACTTTTTTTGGAAAAAAACGTGCAGGTGTCTAA
Upstream 100 bases:
>100_bases GTATACCCTGAAAAATAGTATTACGTATCGAGGTGTGTGGTCGATGATAATGCCGGATACGATTCCAACAGATATGTTTG CTCCCTGCGGGATGAACTGT
Downstream 100 bases:
>100_bases CCATCACCCAGGATTTCATTCTTCCGTTTCTTTTTCTTCCCCGAGACGCTCCATGACCCACTGCTGATCGATCGCCGCGC ACTCCGTTACCGGCACATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MVCYRHCVSKKSCGGCFSNKNGTSEECRSCRIHACVGEKGIEYCFSCKIFPCKQIKKMDKRYRDRYDQSLIENGLMAKEQ GLAAFLAAERSKWTCGKCEGIISLHDNECSECQTFFGKKRAGV
Sequences:
>Translated_123_residues MVCYRHCVSKKSCGGCFSNKNGTSEECRSCRIHACVGEKGIEYCFSCKIFPCKQIKKMDKRYRDRYDQSLIENGLMAKEQ GLAAFLAAERSKWTCGKCEGIISLHDNECSECQTFFGKKRAGV >Mature_123_residues MVCYRHCVSKKSCGGCFSNKNGTSEECRSCRIHACVGEKGIEYCFSCKIFPCKQIKKMDKRYRDRYDQSLIENGLMAKEQ GLAAFLAAERSKWTCGKCEGIISLHDNECSECQTFFGKKRAGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13904; Mature: 13904
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
11.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 13.8 %Cys+Met (Translated Protein) 11.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 13.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVCYRHCVSKKSCGGCFSNKNGTSEECRSCRIHACVGEKGIEYCFSCKIFPCKQIKKMDK CCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHH RYRDRYDQSLIENGLMAKEQGLAAFLAAERSKWTCGKCEGIISLHDNECSECQTFFGKKR HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHC AGV CCC >Mature Secondary Structure MVCYRHCVSKKSCGGCFSNKNGTSEECRSCRIHACVGEKGIEYCFSCKIFPCKQIKKMDK CCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHH RYRDRYDQSLIENGLMAKEQGLAAFLAAERSKWTCGKCEGIISLHDNECSECQTFFGKKR HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHC AGV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA