Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485416

Identifier: 124485416

GI number: 124485416

Start: 560835

End: 562046

Strand: Reverse

Name: 124485416

Synonym: Mlab_0591

Alternate gene names: NA

Gene position: 562046-560835 (Counterclockwise)

Preceding gene: 124485422

Following gene: 124485415

Centisome position: 31.14

GC content: 55.61

Gene sequence:

>1212_bases
ATGATAGAACTGCAGTCATCTCCCAAAGTTTACACCGGATGGACCGAACGGAGCTGCACACCTGACGAAACCCTCAAGCG
GATCGAACAGTTCGTTCCGGAGGCAGGCATCACCCGTGTTGCCGACATCACCGACCTTGACCGGATCGGGATCCCCGTAT
ACTCTTGCATCCGTCCAACAGCCGCCGACGGGGCAATCTCGGTATACAACGGAAAAGGCGGGACCCCGGCCGAAGCCAGA
GTCGCCGGGATCATGGAAGGGATCGAACGATACTCGGCCGAAGCAATACCCCGGGATATCGCAAATATCTCCTACAGCAA
TCTTCGGAGAACCGAAACCGCCGTCGATCCCGTGGACCTCATCCTTCCCCACACAACCGATCCCAATCTCGAAGTCCCCT
GGGTCGACGGGTGGGACATCACCAATAATGAAGCGGTCAAACTTCCGCTTTGCGCCGTCATTCATCCAAATCCTTTCAGC
TACCCGACACTCTTTCGAACAAGTTCCAACGGTATCGCATCAGGAAACACCCTGGAAGAGGCGCTCTTCTATGCACTTAC
CGAAGTGATCGAGCGGGATGCATGGTCACTGGTCGAAACTACCAGAAATACCGGCCCAAAACTCACCGACCTCCCGCCAA
GAGCCGCGGAGATGCTCGCAAAATTCACCGCCGCCGGAGTCGAAGTGACACTTCGAAACATCACCTCGGACGTCGGGATC
CCGACGATCGCCGCCGTATCCGATGATATCGAACTCAAAGACTCCCGGCTTTTGACGATAGGAATGGGGACCCACACCAA
CCCCGAGATCGCCATGATCAGGGCACTCTCCGAAGTCGCACAGAGCAGAGCGACCCAGATCCACGGGGCACGTGAGGACG
CAACGCTTGCCCAGTTCCGCGAAATGATGGGATACGACCGGGTCAAACGGATGAATGCCTACTGGTTCAAAGGCGATGAA
TATCAGGCCGCATCCGAAATCCCGAACAATGCAACGAAAGATTTCAAAACCGACATCGAGCTGATCGTGAAAAATCTCGC
GGACGTCGGCCTTGACCGTGTGATCGTCTGCGATCTTACCGATCCGGAACTCAAAATCCCGGTCGTCCGCGTAGTGGTCC
CGGGTCTTGAATGTTATACCATCGACAACGAACGCAGAGGAAAGAGGTGTGTGGAGATTGAACGTCGTCGTCTTCATCGG
ACCCAGTCTTGA

Upstream 100 bases:

>100_bases
CGTGAAACTAACACCGCGTAACGCCTATTCTCAGAGAAAAACGAGAGGCGGAATTTCCATCCCGCAACATACTTTAGCTT
TCCCGCCAGATACTCATACA

Downstream 100 bases:

>100_bases
TCTGGCAGCCGCCAAATCAATTCTTCCGGACGCGGTCTTTTTACCGCCGGTAAAACGCGGAGCAGCTGCCGCCGCGGCAG
AAAACGCGGACATTATGGTC

Product: NADPH-dependent FMN reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MIELQSSPKVYTGWTERSCTPDETLKRIEQFVPEAGITRVADITDLDRIGIPVYSCIRPTAADGAISVYNGKGGTPAEAR
VAGIMEGIERYSAEAIPRDIANISYSNLRRTETAVDPVDLILPHTTDPNLEVPWVDGWDITNNEAVKLPLCAVIHPNPFS
YPTLFRTSSNGIASGNTLEEALFYALTEVIERDAWSLVETTRNTGPKLTDLPPRAAEMLAKFTAAGVEVTLRNITSDVGI
PTIAAVSDDIELKDSRLLTIGMGTHTNPEIAMIRALSEVAQSRATQIHGAREDATLAQFREMMGYDRVKRMNAYWFKGDE
YQAASEIPNNATKDFKTDIELIVKNLADVGLDRVIVCDLTDPELKIPVVRVVVPGLECYTIDNERRGKRCVEIERRRLHR
TQS

Sequences:

>Translated_403_residues
MIELQSSPKVYTGWTERSCTPDETLKRIEQFVPEAGITRVADITDLDRIGIPVYSCIRPTAADGAISVYNGKGGTPAEAR
VAGIMEGIERYSAEAIPRDIANISYSNLRRTETAVDPVDLILPHTTDPNLEVPWVDGWDITNNEAVKLPLCAVIHPNPFS
YPTLFRTSSNGIASGNTLEEALFYALTEVIERDAWSLVETTRNTGPKLTDLPPRAAEMLAKFTAAGVEVTLRNITSDVGI
PTIAAVSDDIELKDSRLLTIGMGTHTNPEIAMIRALSEVAQSRATQIHGAREDATLAQFREMMGYDRVKRMNAYWFKGDE
YQAASEIPNNATKDFKTDIELIVKNLADVGLDRVIVCDLTDPELKIPVVRVVVPGLECYTIDNERRGKRCVEIERRRLHR
TQS
>Mature_403_residues
MIELQSSPKVYTGWTERSCTPDETLKRIEQFVPEAGITRVADITDLDRIGIPVYSCIRPTAADGAISVYNGKGGTPAEAR
VAGIMEGIERYSAEAIPRDIANISYSNLRRTETAVDPVDLILPHTTDPNLEVPWVDGWDITNNEAVKLPLCAVIHPNPFS
YPTLFRTSSNGIASGNTLEEALFYALTEVIERDAWSLVETTRNTGPKLTDLPPRAAEMLAKFTAAGVEVTLRNITSDVGI
PTIAAVSDDIELKDSRLLTIGMGTHTNPEIAMIRALSEVAQSRATQIHGAREDATLAQFREMMGYDRVKRMNAYWFKGDE
YQAASEIPNNATKDFKTDIELIVKNLADVGLDRVIVCDLTDPELKIPVVRVVVPGLECYTIDNERRGKRCVEIERRRLHR
TQS

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017667
- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 44644; Mature: 44644

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELQSSPKVYTGWTERSCTPDETLKRIEQFVPEAGITRVADITDLDRIGIPVYSCIRPT
CCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCEEHHCCCCHHHCCCCHHHHCCCC
AADGAISVYNGKGGTPAEARVAGIMEGIERYSAEAIPRDIANISYSNLRRTETAVDPVDL
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCE
ILPHTTDPNLEVPWVDGWDITNNEAVKLPLCAVIHPNPFSYPTLFRTSSNGIASGNTLEE
EECCCCCCCEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCHHHH
ALFYALTEVIERDAWSLVETTRNTGPKLTDLPPRAAEMLAKFTAAGVEVTLRNITSDVGI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHCCC
PTIAAVSDDIELKDSRLLTIGMGTHTNPEIAMIRALSEVAQSRATQIHGAREDATLAQFR
CEEEEECCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
EMMGYDRVKRMNAYWFKGDEYQAASEIPNNATKDFKTDIELIVKNLADVGLDRVIVCDLT
HHHCHHHHHHCCCEEECCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC
DPELKIPVVRVVVPGLECYTIDNERRGKRCVEIERRRLHRTQS
CCCCCCCEEEEEECCCEEEECCCHHCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIELQSSPKVYTGWTERSCTPDETLKRIEQFVPEAGITRVADITDLDRIGIPVYSCIRPT
CCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCEEHHCCCCHHHCCCCHHHHCCCC
AADGAISVYNGKGGTPAEARVAGIMEGIERYSAEAIPRDIANISYSNLRRTETAVDPVDL
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCE
ILPHTTDPNLEVPWVDGWDITNNEAVKLPLCAVIHPNPFSYPTLFRTSSNGIASGNTLEE
EECCCCCCCEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCHHHH
ALFYALTEVIERDAWSLVETTRNTGPKLTDLPPRAAEMLAKFTAAGVEVTLRNITSDVGI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHCCC
PTIAAVSDDIELKDSRLLTIGMGTHTNPEIAMIRALSEVAQSRATQIHGAREDATLAQFR
CEEEEECCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
EMMGYDRVKRMNAYWFKGDEYQAASEIPNNATKDFKTDIELIVKNLADVGLDRVIVCDLT
HHHCHHHHHHCCCEEECCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC
DPELKIPVVRVVVPGLECYTIDNERRGKRCVEIERRRLHRTQS
CCCCCCCEEEEEECCCEEEECCCHHCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]