Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265794
Identifier: 124265794
GI number: 124265794
Start: 632710
End: 633984
Strand: Direct
Name: 124265794
Synonym: Mpe_A0601
Alternate gene names: NA
Gene position: 632710-633984 (Clockwise)
Preceding gene: 124265790
Following gene: 124265795
Centisome position: 15.64
GC content: 75.53
Gene sequence:
>1275_bases ATGCCGCCCCGCTCGCTCGCCCGTGGCGCCGCCCTGAATCTGGCGGCGCGCTTCGCCGCGGTGTTGCTCGGCCTGGCCAT CCTGGTCACGGTGGCCCGGCTCGGTCCGGCGGTGCAGGGGGCGTTCGCGCTGTTCGTGGCGGTGGAGGCCGCGCTGCTGA CGTTGTTTTCCGGGCTGGGTCTGCTGCTGGCGCGCGAGGTGTCGCACCGCGAGGTGCCGCCGGCACCGCTGCTCGCCGCG CTGTTGCGCGCGGCGCTGGGGCTGGGGCTGGCGGCTGCCGCGGGCCTGCTGGCCGTGTCGGCCGGTTCGGAGGCGGCGCC CTACCGCCACCTGTGGCTGCTCGCGCTGGCTGCCCCCTTCCTGCTGCTGGTGCCGACCGCCAGCGGCCTGTGGCTGGGCC AGGGGCGCATGGGCCCGCTCAACGTGCCGCAGGTGGCGGCGCCGGTCCTCGTGCTGGCACTGTTGCTCGCCGCAGGGGCC GCGTGGCCGTCGGCGGGCGCGGCGCCGACCGTGCTCGCGGTGCTGGCGGCCTGGGTGCTCGGCAAGGCGCTGGTCGGCAT CGGCACCGGCTGGGCTGCGAGGCGCGATGCCGGCCCGGCCGCGCCGCAGCGCGGCGTGCTGCGCGATCGTTGGCGCTTCG TGGCGACGATCGGCGCGACCAACCTGGTCAGCCTGCTGAACTACCGCGCCACGCTGTTCCTGCTGGAGCGCCACGGCGGG CTCGCCGAGACGGGCGTCTACTCGGTGGCGGTGCAGGTGGCCGAACTGCTGTGGCTGCTGTCGTCGGCGGTCACCGTGTC GGCCTACCACCGCATCGGCGCGCCCGACGCGCAACAGGCTGCCTGGACCACGCTGCGCGCCGTGCAGGTGAACCTGCTCG CGACGCTGCTGGCAGCGCCGCTGTTGTACGCGGGTGCCGCGTTCGCACTGCCGGCCGTGCTGGGCCCGGCCTATGCCGGC GCGGTGCTGCCGCTGGCGCTGCTGCTGCCGGGCGTCGCCGGCTACGCCGCGGCATCCAGCCTGTCGGCCTACTACACCAA CCACCGCGGTCGGCCGCAGTGGTCGGCCGGCATCGCCGGCCTGTCGCTCGTGCTCACGCTGGGCATCGCAGCCTGGAGCA TCCCCCGCCACGGCGCGGCGGGCGCGGCGCTCGCCACCTCGCTGGCCTACGGCGTGGCGATCGCGGTCGCGCTGGCGCTG TTTCTTCGCGATACGAAGTTGCCCTGGACGGCCTTGTTCAGCGGCTGGCGCGCGCCACAATCCGGGCCGGCATGA
Upstream 100 bases:
>100_bases ACTGGCTCCGTGCCACCGGCCGGGGCCACCGGTCGAGGCGCGGCCGGGCCGCGCCGTCCCCGACAATCGGACGCCGCCCC TTCCGTCGCCGACCGCCCCG
Downstream 100 bases:
>100_bases ACGGCTTGAAGCGACCTCTGATCGGACTCTGGCAGCGCCTCGTCGCGCCCCGCATGGTCTATGGCGTGCGCAGTGCCGAC GGCGGATGGCGTGCCCACAG
Product: putative membrane protein involved in the export of O-antigen and teichoic acid
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MPPRSLARGAALNLAARFAAVLLGLAILVTVARLGPAVQGAFALFVAVEAALLTLFSGLGLLLAREVSHREVPPAPLLAA LLRAALGLGLAAAAGLLAVSAGSEAAPYRHLWLLALAAPFLLLVPTASGLWLGQGRMGPLNVPQVAAPVLVLALLLAAGA AWPSAGAAPTVLAVLAAWVLGKALVGIGTGWAARRDAGPAAPQRGVLRDRWRFVATIGATNLVSLLNYRATLFLLERHGG LAETGVYSVAVQVAELLWLLSSAVTVSAYHRIGAPDAQQAAWTTLRAVQVNLLATLLAAPLLYAGAAFALPAVLGPAYAG AVLPLALLLPGVAGYAAASSLSAYYTNHRGRPQWSAGIAGLSLVLTLGIAAWSIPRHGAAGAALATSLAYGVAIAVALAL FLRDTKLPWTALFSGWRAPQSGPA
Sequences:
>Translated_424_residues MPPRSLARGAALNLAARFAAVLLGLAILVTVARLGPAVQGAFALFVAVEAALLTLFSGLGLLLAREVSHREVPPAPLLAA LLRAALGLGLAAAAGLLAVSAGSEAAPYRHLWLLALAAPFLLLVPTASGLWLGQGRMGPLNVPQVAAPVLVLALLLAAGA AWPSAGAAPTVLAVLAAWVLGKALVGIGTGWAARRDAGPAAPQRGVLRDRWRFVATIGATNLVSLLNYRATLFLLERHGG LAETGVYSVAVQVAELLWLLSSAVTVSAYHRIGAPDAQQAAWTTLRAVQVNLLATLLAAPLLYAGAAFALPAVLGPAYAG AVLPLALLLPGVAGYAAASSLSAYYTNHRGRPQWSAGIAGLSLVLTLGIAAWSIPRHGAAGAALATSLAYGVAIAVALAL FLRDTKLPWTALFSGWRAPQSGPA >Mature_423_residues PPRSLARGAALNLAARFAAVLLGLAILVTVARLGPAVQGAFALFVAVEAALLTLFSGLGLLLAREVSHREVPPAPLLAAL LRAALGLGLAAAAGLLAVSAGSEAAPYRHLWLLALAAPFLLLVPTASGLWLGQGRMGPLNVPQVAAPVLVLALLLAAGAA WPSAGAAPTVLAVLAAWVLGKALVGIGTGWAARRDAGPAAPQRGVLRDRWRFVATIGATNLVSLLNYRATLFLLERHGGL AETGVYSVAVQVAELLWLLSSAVTVSAYHRIGAPDAQQAAWTTLRAVQVNLLATLLAAPLLYAGAAFALPAVLGPAYAGA VLPLALLLPGVAGYAAASSLSAYYTNHRGRPQWSAGIAGLSLVLTLGIAAWSIPRHGAAGAALATSLAYGVAIAVALALF LRDTKLPWTALFSGWRAPQSGPA
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43077; Mature: 42946
Theoretical pI: Translated: 11.58; Mature: 11.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPRSLARGAALNLAARFAAVLLGLAILVTVARLGPAVQGAFALFVAVEAALLTLFSGLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH LLLAREVSHREVPPAPLLAALLRAALGLGLAAAAGLLAVSAGSEAAPYRHLWLLALAAPF HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH LLLVPTASGLWLGQGRMGPLNVPQVAAPVLVLALLLAAGAAWPSAGAAPTVLAVLAAWVL HHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH GKALVGIGTGWAARRDAGPAAPQRGVLRDRWRFVATIGATNLVSLLNYRATLFLLERHGG HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCC LAETGVYSVAVQVAELLWLLSSAVTVSAYHRIGAPDAQQAAWTTLRAVQVNLLATLLAAP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLYAGAAFALPAVLGPAYAGAVLPLALLLPGVAGYAAASSLSAYYTNHRGRPQWSAGIAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LSLVLTLGIAAWSIPRHGAAGAALATSLAYGVAIAVALALFLRDTKLPWTALFSGWRAPQ HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC SGPA CCCC >Mature Secondary Structure PPRSLARGAALNLAARFAAVLLGLAILVTVARLGPAVQGAFALFVAVEAALLTLFSGLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH LLLAREVSHREVPPAPLLAALLRAALGLGLAAAAGLLAVSAGSEAAPYRHLWLLALAAPF HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH LLLVPTASGLWLGQGRMGPLNVPQVAAPVLVLALLLAAGAAWPSAGAAPTVLAVLAAWVL HHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH GKALVGIGTGWAARRDAGPAAPQRGVLRDRWRFVATIGATNLVSLLNYRATLFLLERHGG HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCC LAETGVYSVAVQVAELLWLLSSAVTVSAYHRIGAPDAQQAAWTTLRAVQVNLLATLLAAP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLYAGAAFALPAVLGPAYAGAVLPLALLLPGVAGYAAASSLSAYYTNHRGRPQWSAGIAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LSLVLTLGIAAWSIPRHGAAGAALATSLAYGVAIAVALALFLRDTKLPWTALFSGWRAPQ HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC SGPA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA