Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265748
Identifier: 124265748
GI number: 124265748
Start: 587439
End: 588074
Strand: Direct
Name: 124265748
Synonym: Mpe_A0555
Alternate gene names: NA
Gene position: 587439-588074 (Clockwise)
Preceding gene: 124265747
Following gene: 124265750
Centisome position: 14.53
GC content: 69.18
Gene sequence:
>636_bases ATGCATCGAACCCGATCCGCCATGGCATCGCTGGCGGCATGCGCTGCGGCGCTGCTCGTCGCCGGTTGCGCCAGCCTCAA CAGCGTGGCCGTTGACGTGTCCAGCCAAGGGAGCTGGCCGGCCGATCGCAAGCCGGGCAGCTACGCGGTCGAACGCCTGC CGTCGCAACAGGCGAACGCGGCCGAGCAGGACCGCATCGAGGCCGCGGCCCTGCCGGCGCTCGAGGCAGCCGGCTTCACT CGCGTCCCGTCCGAGCAGGCCGATGTGCTGATCCAGGTCGGGGCCCGGGTGTTCGAGGTGGCGCGCCGCGATCCCTACAT GAGCCATTGGGCCTGGCGCAACGACTGGTGGTTCTACGGCGCGCGCCGACCGTTCTTCCATGGGCCGGGCTTCGGCTATG CACCGGGGTTCGGCTATGACTATTACGACATCCCGGATTACCAGCGCGAGGTCGGCATCCTGATCCGTGATCGGCGTAGC CAGCAGATCGTCTACGAGACGCGTGCCGCCTATTCGAGTCGCTGGACCTCGGAGGCGCTGCTGCCGGCGATGTTCGAGGC GGCGATGAAGGACTTTCCGCTGCCGGCGCTGACGCCGCGGACGGTGACGGTGGCGTTGCCCCCCTCGGCGCGCTGA
Upstream 100 bases:
>100_bases GACGACGAGACCTGTGCGCCGCCCGGCGCGGCGTCGGTCATCGAGGCCGCGATGCCGATCCGTTGGCATGGGCAAGGCTG AGTCAGGGCAAGGAGTCCGC
Downstream 100 bases:
>100_bases TCGATCAGGCGGGCGTCGCGAGACGCCGCAGGTCGGCCGCCCACCCTCTGAGCTTGCGCTGGGCCTCGTGCCGTTGCTCG GGCGTCGTGCGGTTGTGGAT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MHRTRSAMASLAACAAALLVAGCASLNSVAVDVSSQGSWPADRKPGSYAVERLPSQQANAAEQDRIEAAALPALEAAGFT RVPSEQADVLIQVGARVFEVARRDPYMSHWAWRNDWWFYGARRPFFHGPGFGYAPGFGYDYYDIPDYQREVGILIRDRRS QQIVYETRAAYSSRWTSEALLPAMFEAAMKDFPLPALTPRTVTVALPPSAR
Sequences:
>Translated_211_residues MHRTRSAMASLAACAAALLVAGCASLNSVAVDVSSQGSWPADRKPGSYAVERLPSQQANAAEQDRIEAAALPALEAAGFT RVPSEQADVLIQVGARVFEVARRDPYMSHWAWRNDWWFYGARRPFFHGPGFGYAPGFGYDYYDIPDYQREVGILIRDRRS QQIVYETRAAYSSRWTSEALLPAMFEAAMKDFPLPALTPRTVTVALPPSAR >Mature_211_residues MHRTRSAMASLAACAAALLVAGCASLNSVAVDVSSQGSWPADRKPGSYAVERLPSQQANAAEQDRIEAAALPALEAAGFT RVPSEQADVLIQVGARVFEVARRDPYMSHWAWRNDWWFYGARRPFFHGPGFGYAPGFGYDYYDIPDYQREVGILIRDRRS QQIVYETRAAYSSRWTSEALLPAMFEAAMKDFPLPALTPRTVTVALPPSAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23347; Mature: 23347
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRTRSAMASLAACAAALLVAGCASLNSVAVDVSSQGSWPADRKPGSYAVERLPSQQANA CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCHHCCC AEQDRIEAAALPALEAAGFTRVPSEQADVLIQVGARVFEVARRDPYMSHWAWRNDWWFYG HHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCEECCCEEEEC ARRPFFHGPGFGYAPGFGYDYYDIPDYQREVGILIRDRRSQQIVYETRAAYSSRWTSEAL CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCEEEECCCCCHHHHHHHHHHHHCCCHHHH LPAMFEAAMKDFPLPALTPRTVTVALPPSAR HHHHHHHHHHHCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure MHRTRSAMASLAACAAALLVAGCASLNSVAVDVSSQGSWPADRKPGSYAVERLPSQQANA CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCHHCCC AEQDRIEAAALPALEAAGFTRVPSEQADVLIQVGARVFEVARRDPYMSHWAWRNDWWFYG HHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCEECCCEEEEC ARRPFFHGPGFGYAPGFGYDYYDIPDYQREVGILIRDRRSQQIVYETRAAYSSRWTSEAL CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCEEEECCCCCHHHHHHHHHHHHCCCHHHH LPAMFEAAMKDFPLPALTPRTVTVALPPSAR HHHHHHHHHHHCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA