Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

Click here to switch to the map view.

The map label for this gene is 124265693

Identifier: 124265693

GI number: 124265693

Start: 540730

End: 541461

Strand: Direct

Name: 124265693

Synonym: Mpe_A0500

Alternate gene names: NA

Gene position: 540730-541461 (Clockwise)

Preceding gene: 124265692

Following gene: 124265694

Centisome position: 13.37

GC content: 68.58

Gene sequence:

>732_bases
GTGGCTGCCGCCGGCCGGCCGGTCGTCTGGCTGTTCGACCTCGACAACACGCTGCACGACGCCTCGCACGCGGCGTTCGG
CCTGCTCGACGAGGCGATGAACGACTACATCGCGCAGGCGCTTCGGGTCGACGCGGCGCAGGCCGACTTCCTGCGGCTCG
ACTACTGGCGCCGCTACGGCGCCACGTTGTTGGGGCTGGAGCGGCATCACGGCATTCGCGCCGCGCACTTCCTCGAGCAC
ACCCACCGCCTGCCGGACCTCGAGCAACGGCTGCGCGGGAGCCCGCGTGACCGCGCTGCGTTGCGAGCGTTGCCGGGGCG
CAAGTTCGTGCTGACCAATGCGCCGGCCAGCTACGCCAAGCGCGTGCTGACGGCGCTCGACCTGGCGGATTGCTTCGAGG
GCATCGTCAGCATCGAAGGCATGCGCCTGTTCGGTCATCTGCGCCCCAAGCCCGATGCACGCATGTTCCGGGTGGTGCTG
GCGAGGCTGAAATTGCGGCCGGCGCAGTGCGTGCTGGTCGAGGACACGCTGGCCCACCAGCGCGCGGCGCGCGCCGTCGG
ACTGCGCACCGTCTGGATGCAGCGATATGTGTGGCGCAATGCTCATGGACCCGAAGTAGGTGCGCGCTTGCGTCGAAAGC
CCGCTTATGTGTATGCAAGAATTCGCTCGCTTTCGACGCTAGCCACCCACTTCCTCCCCGCCCGCGCGCATGTCCGACAC
GCCGATCCCTGA

Upstream 100 bases:

>100_bases
CAATGCGGTGCACATCATCGACGGCCGGGTGCCGCATGCGATGCTGCTCGAGATCCTGAGCGACCAGGCCTACGGCACGA
TGATCCGGTCGCACTGAGCA

Downstream 100 bases:

>100_bases
GCCGCTGGATGCCGCCGACGACACGCCCGCCGAGGGGGTCGCCGCCGCAGCACCCGTGCGCAAGCGGCCCAAGCCGGGCG
AGCGCCGCATCCAGATCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; HAD Family Pyrimidine 5-Nucleotidase; HAD Superfamily Hydrolase; HAD Family Hydrolase; Phosphatase; Hydrolase Protein; HAD Superfamily Protein; Haloacid Dehalogenase Superfamily Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase; Phosphoglycolate Phosphatase; Hydrolase Ripening-Related Protein-Like; Haloacid Dehalogenase-Like Hydrolase Family Protein; Hydrolase Of HAD Superfamily

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MAAAGRPVVWLFDLDNTLHDASHAAFGLLDEAMNDYIAQALRVDAAQADFLRLDYWRRYGATLLGLERHHGIRAAHFLEH
THRLPDLEQRLRGSPRDRAALRALPGRKFVLTNAPASYAKRVLTALDLADCFEGIVSIEGMRLFGHLRPKPDARMFRVVL
ARLKLRPAQCVLVEDTLAHQRAARAVGLRTVWMQRYVWRNAHGPEVGARLRRKPAYVYARIRSLSTLATHFLPARAHVRH
ADP

Sequences:

>Translated_243_residues
MAAAGRPVVWLFDLDNTLHDASHAAFGLLDEAMNDYIAQALRVDAAQADFLRLDYWRRYGATLLGLERHHGIRAAHFLEH
THRLPDLEQRLRGSPRDRAALRALPGRKFVLTNAPASYAKRVLTALDLADCFEGIVSIEGMRLFGHLRPKPDARMFRVVL
ARLKLRPAQCVLVEDTLAHQRAARAVGLRTVWMQRYVWRNAHGPEVGARLRRKPAYVYARIRSLSTLATHFLPARAHVRH
ADP
>Mature_242_residues
AAAGRPVVWLFDLDNTLHDASHAAFGLLDEAMNDYIAQALRVDAAQADFLRLDYWRRYGATLLGLERHHGIRAAHFLEHT
HRLPDLEQRLRGSPRDRAALRALPGRKFVLTNAPASYAKRVLTALDLADCFEGIVSIEGMRLFGHLRPKPDARMFRVVLA
RLKLRPAQCVLVEDTLAHQRAARAVGLRTVWMQRYVWRNAHGPEVGARLRRKPAYVYARIRSLSTLATHFLPARAHVRHA
DP

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27581; Mature: 27450

Theoretical pI: Translated: 11.25; Mature: 11.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAGRPVVWLFDLDNTLHDASHAAFGLLDEAMNDYIAQALRVDAAQADFLRLDYWRRYG
CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ATLLGLERHHGIRAAHFLEHTHRLPDLEQRLRGSPRDRAALRALPGRKFVLTNAPASYAK
HHHEEHHHHCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHCCCCEEEEECCCHHHHH
RVLTALDLADCFEGIVSIEGMRLFGHLRPKPDARMFRVVLARLKLRPAQCVLVEDTLAHQ
HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHH
RAARAVGLRTVWMQRYVWRNAHGPEVGARLRRKPAYVYARIRSLSTLATHFLPARAHVRH
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
ADP
CCC
>Mature Secondary Structure 
AAAGRPVVWLFDLDNTLHDASHAAFGLLDEAMNDYIAQALRVDAAQADFLRLDYWRRYG
CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ATLLGLERHHGIRAAHFLEHTHRLPDLEQRLRGSPRDRAALRALPGRKFVLTNAPASYAK
HHHEEHHHHCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHCCCCEEEEECCCHHHHH
RVLTALDLADCFEGIVSIEGMRLFGHLRPKPDARMFRVVLARLKLRPAQCVLVEDTLAHQ
HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHH
RAARAVGLRTVWMQRYVWRNAHGPEVGARLRRKPAYVYARIRSLSTLATHFLPARAHVRH
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
ADP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA