Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265693
Identifier: 124265693
GI number: 124265693
Start: 540730
End: 541461
Strand: Direct
Name: 124265693
Synonym: Mpe_A0500
Alternate gene names: NA
Gene position: 540730-541461 (Clockwise)
Preceding gene: 124265692
Following gene: 124265694
Centisome position: 13.37
GC content: 68.58
Gene sequence:
>732_bases GTGGCTGCCGCCGGCCGGCCGGTCGTCTGGCTGTTCGACCTCGACAACACGCTGCACGACGCCTCGCACGCGGCGTTCGG CCTGCTCGACGAGGCGATGAACGACTACATCGCGCAGGCGCTTCGGGTCGACGCGGCGCAGGCCGACTTCCTGCGGCTCG ACTACTGGCGCCGCTACGGCGCCACGTTGTTGGGGCTGGAGCGGCATCACGGCATTCGCGCCGCGCACTTCCTCGAGCAC ACCCACCGCCTGCCGGACCTCGAGCAACGGCTGCGCGGGAGCCCGCGTGACCGCGCTGCGTTGCGAGCGTTGCCGGGGCG CAAGTTCGTGCTGACCAATGCGCCGGCCAGCTACGCCAAGCGCGTGCTGACGGCGCTCGACCTGGCGGATTGCTTCGAGG GCATCGTCAGCATCGAAGGCATGCGCCTGTTCGGTCATCTGCGCCCCAAGCCCGATGCACGCATGTTCCGGGTGGTGCTG GCGAGGCTGAAATTGCGGCCGGCGCAGTGCGTGCTGGTCGAGGACACGCTGGCCCACCAGCGCGCGGCGCGCGCCGTCGG ACTGCGCACCGTCTGGATGCAGCGATATGTGTGGCGCAATGCTCATGGACCCGAAGTAGGTGCGCGCTTGCGTCGAAAGC CCGCTTATGTGTATGCAAGAATTCGCTCGCTTTCGACGCTAGCCACCCACTTCCTCCCCGCCCGCGCGCATGTCCGACAC GCCGATCCCTGA
Upstream 100 bases:
>100_bases CAATGCGGTGCACATCATCGACGGCCGGGTGCCGCATGCGATGCTGCTCGAGATCCTGAGCGACCAGGCCTACGGCACGA TGATCCGGTCGCACTGAGCA
Downstream 100 bases:
>100_bases GCCGCTGGATGCCGCCGACGACACGCCCGCCGAGGGGGTCGCCGCCGCAGCACCCGTGCGCAAGCGGCCCAAGCCGGGCG AGCGCCGCATCCAGATCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; HAD Family Pyrimidine 5-Nucleotidase; HAD Superfamily Hydrolase; HAD Family Hydrolase; Phosphatase; Hydrolase Protein; HAD Superfamily Protein; Haloacid Dehalogenase Superfamily Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase; Phosphoglycolate Phosphatase; Hydrolase Ripening-Related Protein-Like; Haloacid Dehalogenase-Like Hydrolase Family Protein; Hydrolase Of HAD Superfamily
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MAAAGRPVVWLFDLDNTLHDASHAAFGLLDEAMNDYIAQALRVDAAQADFLRLDYWRRYGATLLGLERHHGIRAAHFLEH THRLPDLEQRLRGSPRDRAALRALPGRKFVLTNAPASYAKRVLTALDLADCFEGIVSIEGMRLFGHLRPKPDARMFRVVL ARLKLRPAQCVLVEDTLAHQRAARAVGLRTVWMQRYVWRNAHGPEVGARLRRKPAYVYARIRSLSTLATHFLPARAHVRH ADP
Sequences:
>Translated_243_residues MAAAGRPVVWLFDLDNTLHDASHAAFGLLDEAMNDYIAQALRVDAAQADFLRLDYWRRYGATLLGLERHHGIRAAHFLEH THRLPDLEQRLRGSPRDRAALRALPGRKFVLTNAPASYAKRVLTALDLADCFEGIVSIEGMRLFGHLRPKPDARMFRVVL ARLKLRPAQCVLVEDTLAHQRAARAVGLRTVWMQRYVWRNAHGPEVGARLRRKPAYVYARIRSLSTLATHFLPARAHVRH ADP >Mature_242_residues AAAGRPVVWLFDLDNTLHDASHAAFGLLDEAMNDYIAQALRVDAAQADFLRLDYWRRYGATLLGLERHHGIRAAHFLEHT HRLPDLEQRLRGSPRDRAALRALPGRKFVLTNAPASYAKRVLTALDLADCFEGIVSIEGMRLFGHLRPKPDARMFRVVLA RLKLRPAQCVLVEDTLAHQRAARAVGLRTVWMQRYVWRNAHGPEVGARLRRKPAYVYARIRSLSTLATHFLPARAHVRHA DP
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27581; Mature: 27450
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAAGRPVVWLFDLDNTLHDASHAAFGLLDEAMNDYIAQALRVDAAQADFLRLDYWRRYG CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ATLLGLERHHGIRAAHFLEHTHRLPDLEQRLRGSPRDRAALRALPGRKFVLTNAPASYAK HHHEEHHHHCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHCCCCEEEEECCCHHHHH RVLTALDLADCFEGIVSIEGMRLFGHLRPKPDARMFRVVLARLKLRPAQCVLVEDTLAHQ HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHH RAARAVGLRTVWMQRYVWRNAHGPEVGARLRRKPAYVYARIRSLSTLATHFLPARAHVRH HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC ADP CCC >Mature Secondary Structure AAAGRPVVWLFDLDNTLHDASHAAFGLLDEAMNDYIAQALRVDAAQADFLRLDYWRRYG CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ATLLGLERHHGIRAAHFLEHTHRLPDLEQRLRGSPRDRAALRALPGRKFVLTNAPASYAK HHHEEHHHHCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHCCCCEEEEECCCHHHHH RVLTALDLADCFEGIVSIEGMRLFGHLRPKPDARMFRVVLARLKLRPAQCVLVEDTLAHQ HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHH RAARAVGLRTVWMQRYVWRNAHGPEVGARLRRKPAYVYARIRSLSTLATHFLPARAHVRH HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC ADP CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA