Click here to switch to the map view.

The map label for this gene is yqaA [H]

Identifier: 124265680

GI number: 124265680

Start: 528966

End: 529448

Strand: Direct

Name: yqaA [H]

Synonym: Mpe_A0487

Alternate gene names: 124265680

Gene position: 528966-529448 (Clockwise)

Preceding gene: 124265674

Following gene: 124265684

Centisome position: 13.08

GC content: 69.57

Gene sequence:

>483_bases
ATGGAGAGCTGGCTCGAATCGATGCTCGCCGTGCTCGCGTTGCCGAAGTTCGGCCTGAGCACGGTGTTCGTCGTCGCCTT
CGTCTCGGCCACGCTGCTGCCGTTCGGTTCGGAGCCGGCGGTGTTCGGCCTGGTCAAGCTCGACCCGCAGTTGTTCTGGC
CGGCCGTGCTGGTGGCCACCGCCGGCAACACGCTCGGCGGCGCGGTCACGTGGTGGATGGGTTACGGCGCCGAGCGTGCC
TACGAGCGCGTGAAGCACAGGCCGGCCGACGCGCGCGTGCTGAAGTGGCTCGAGCGCTTCGGCCCGCCGGCCTGCCTGCT
GAGCTGGCTGCCGGTGGTCGGTGACCCGCTGTGTGCGGTGGCTGGCTGGCTGCGGCTGCCGTTCTGGCCCTGCCTGCTCT
ACATGGCGATCGGCAAGTTCGCGCGCTACCTGACGATGACGGCGCTGCTGCTGTGGGTGTTGCCGGGGCAGTTTCACCCC
TGA

Upstream 100 bases:

>100_bases
GGTGTGCTTAAAAAGAGGGCAGAGTATAGCGGCGCGATCCGGGCAGGTCGGGCACCGATCGGTGGCGCTGCTTGCTGCGC
TGCATCGACAATCCACATCG

Downstream 100 bases:

>100_bases
CGAGCGGTGCGCTCCGGCGCCGCCGTCAGGCCGTGAGCGCGGCGTCCAGCGCGTCGAGCGTCGTCTCGAGCCGGCGCAGC
GCCTCGTTGGCGCGGCCGAC

Product: putative transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MESWLESMLAVLALPKFGLSTVFVVAFVSATLLPFGSEPAVFGLVKLDPQLFWPAVLVATAGNTLGGAVTWWMGYGAERA
YERVKHRPADARVLKWLERFGPPACLLSWLPVVGDPLCAVAGWLRLPFWPCLLYMAIGKFARYLTMTALLLWVLPGQFHP

Sequences:

>Translated_160_residues
MESWLESMLAVLALPKFGLSTVFVVAFVSATLLPFGSEPAVFGLVKLDPQLFWPAVLVATAGNTLGGAVTWWMGYGAERA
YERVKHRPADARVLKWLERFGPPACLLSWLPVVGDPLCAVAGWLRLPFWPCLLYMAIGKFARYLTMTALLLWVLPGQFHP
>Mature_160_residues
MESWLESMLAVLALPKFGLSTVFVVAFVSATLLPFGSEPAVFGLVKLDPQLFWPAVLVATAGNTLGGAVTWWMGYGAERA
YERVKHRPADARVLKWLERFGPPACLLSWLPVVGDPLCAVAGWLRLPFWPCLLYMAIGKFARYLTMTALLLWVLPGQFHP

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=130, Percent_Identity=37.6923076923077, Blast_Score=84, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 17719; Mature: 17719

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESWLESMLAVLALPKFGLSTVFVVAFVSATLLPFGSEPAVFGLVKLDPQLFWPAVLVAT
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHH
AGNTLGGAVTWWMGYGAERAYERVKHRPADARVLKWLERFGPPACLLSWLPVVGDPLCAV
CCCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHH
AGWLRLPFWPCLLYMAIGKFARYLTMTALLLWVLPGQFHP
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MESWLESMLAVLALPKFGLSTVFVVAFVSATLLPFGSEPAVFGLVKLDPQLFWPAVLVAT
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHH
AGNTLGGAVTWWMGYGAERAYERVKHRPADARVLKWLERFGPPACLLSWLPVVGDPLCAV
CCCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHH
AGWLRLPFWPCLLYMAIGKFARYLTMTALLLWVLPGQFHP
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]