Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is yaeQ [H]
Identifier: 124265634
GI number: 124265634
Start: 480326
End: 480886
Strand: Direct
Name: yaeQ [H]
Synonym: Mpe_A0441
Alternate gene names: 124265634
Gene position: 480326-480886 (Clockwise)
Preceding gene: 124265632
Following gene: 124265635
Centisome position: 11.88
GC content: 67.56
Gene sequence:
>561_bases ATGGCTCTCAAATCAACGGTCTTCAAGGCCGAACTCCAGGTCGCCGACATGGACCGTGCCCACTACGGCACCCATGCGCT GACGCTGGCCCAGCACCCGTCGGAGAACGACGAGCGGATGATGGTGCGGCTGCTCGCCTACGCCTTGCATGCCGAAGGCG AGGATCGGGCGCCATTGTCCTTCGCCAACGCGATGACCGAGATGGACGAGCCCGATCTGTGGCGGCGCAGCCTGGTCGGC GACATCGAACTGTGGGTCGATGTCGGCCAGCCGGAAGAGAAATGGGTGCGCAAGGCCAGCCACCGTTCGCGCGAGGTGGT GCTGTACATCTACGGCCGCAACGGCAGCCTGTGGTGGGGGCAGAACCGCGGGCCGCTGGAGAAGCTGGCGAACCTGCGCG TTCGCCAGGTCCCGGCCGAGGCGAGCACGGCGCTCGCGCTGCTGGCCCGCCGCAGCATGCGGCTGCAGTGCACGGTGCAG GACGGGACGGTCTGGCTCGGCGATGGCGACGCGACCGTGGAGGTGGAGTTGGTGGAGCTGAAGGAAGCCGTGCTCCGTTG A
Upstream 100 bases:
>100_bases GAAGCGCTGCGGTGTGCCAGACTGCGAGAGCCGCCCCAGGGTCTTCTTGGCCTTGTCCTTCTCCAGATCGAACTTCTTGC TCGGCATCGCGACACTCTCC
Downstream 100 bases:
>100_bases ACCGGCGCCGCGAAGCGCCGGGCGCTGGCTACACTGCGGCGCGTGGAGACCAAGTGGCTGGAAGACTTCGTGAGCCTGGC CGAGACGCGCAGCTTCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MALKSTVFKAELQVADMDRAHYGTHALTLAQHPSENDERMMVRLLAYALHAEGEDRAPLSFANAMTEMDEPDLWRRSLVG DIELWVDVGQPEEKWVRKASHRSREVVLYIYGRNGSLWWGQNRGPLEKLANLRVRQVPAEASTALALLARRSMRLQCTVQ DGTVWLGDGDATVEVELVELKEAVLR
Sequences:
>Translated_186_residues MALKSTVFKAELQVADMDRAHYGTHALTLAQHPSENDERMMVRLLAYALHAEGEDRAPLSFANAMTEMDEPDLWRRSLVG DIELWVDVGQPEEKWVRKASHRSREVVLYIYGRNGSLWWGQNRGPLEKLANLRVRQVPAEASTALALLARRSMRLQCTVQ DGTVWLGDGDATVEVELVELKEAVLR >Mature_185_residues ALKSTVFKAELQVADMDRAHYGTHALTLAQHPSENDERMMVRLLAYALHAEGEDRAPLSFANAMTEMDEPDLWRRSLVGD IELWVDVGQPEEKWVRKASHRSREVVLYIYGRNGSLWWGQNRGPLEKLANLRVRQVPAEASTALALLARRSMRLQCTVQD GTVWLGDGDATVEVELVELKEAVLR
Specific function: Unknown
COG id: COG4681
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786388, Length=179, Percent_Identity=40.7821229050279, Blast_Score=142, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009822 [H]
Pfam domain/function: PF07152 YaeQ [H]
EC number: NA
Molecular weight: Translated: 21065; Mature: 20934
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKSTVFKAELQVADMDRAHYGTHALTLAQHPSENDERMMVRLLAYALHAEGEDRAPLS CCCCHHHHHEEEEEECCCCHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHH FANAMTEMDEPDLWRRSLVGDIELWVDVGQPEEKWVRKASHRSREVVLYIYGRNGSLWWG HHHHHHCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEEEEEEEECCCCEEEC QNRGPLEKLANLRVRQVPAEASTALALLARRSMRLQCTVQDGTVWLGDGDATVEVELVEL CCCCHHHHHHCCCEEECCCHHHHHHHHHHHCCEEEEEEEECCEEEECCCCCEEEEEHHHH KEAVLR HHHHCC >Mature Secondary Structure ALKSTVFKAELQVADMDRAHYGTHALTLAQHPSENDERMMVRLLAYALHAEGEDRAPLS CCCHHHHHEEEEEECCCCHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHH FANAMTEMDEPDLWRRSLVGDIELWVDVGQPEEKWVRKASHRSREVVLYIYGRNGSLWWG HHHHHHCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEEEEEEEECCCCEEEC QNRGPLEKLANLRVRQVPAEASTALALLARRSMRLQCTVQDGTVWLGDGDATVEVELVEL CCCCHHHHHHCCCEEECCCHHHHHHHHHHHCCEEEEEEEECCEEEECCCCCEEEEEHHHH KEAVLR HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]