Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

Click here to switch to the map view.

The map label for this gene is 124265628

Identifier: 124265628

GI number: 124265628

Start: 475293

End: 475649

Strand: Direct

Name: 124265628

Synonym: Mpe_A0435

Alternate gene names: NA

Gene position: 475293-475649 (Clockwise)

Preceding gene: 124265627

Following gene: 124265629

Centisome position: 11.75

GC content: 69.47

Gene sequence:

>357_bases
ATGCCCTATGCCTTGCGCCACGCCGACGGCCGCGTCCTAAGCCTGCACCGCCACCCGGAAGCGGGCGCGGAGTTTCTGCC
GCCTGACCACCCGGAGGTGCAGGCCTTCGTCGGCGCCGGCAGCACGCCGCAGAGCGAGTTCGCGAAGCTCGACGCCGACG
TCGTGCGCGTGCTCGAAGACCTGATCGACGTGCTGATCGCCCGCCAGGTCCTGCGCATCACCGACCTGCCGGTGCAGGCG
CAGGAGAAGCTGTACGCACGCAAGAGCTTCCGCGATCGCAAGCCGGCCCAGGCGCTGCGCCTGTACGGCGACGAGGACGA
CGACGGCATCCTCTCCACCGATTTCTCGGCGCTCTGA

Upstream 100 bases:

>100_bases
ACCTTTGCCTTCCTCGGCGTGAACATGTTCCTGTCGGGCCTGCACTCCTACGGGCAGTTGTAAGCGGCAGGACGCTGCGC
CGATTAAAGTCGGCAGCGTC

Downstream 100 bases:

>100_bases
CGGGTCGCCCGGGACGCGTGCCCGGGCTGTAAGGTTGCTCGTCGCGCCGCGACTGTTGTGCAAGGATGTGCGGCCCGTGA
CGGAACTCCCGCCCCGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MPYALRHADGRVLSLHRHPEAGAEFLPPDHPEVQAFVGAGSTPQSEFAKLDADVVRVLEDLIDVLIARQVLRITDLPVQA
QEKLYARKSFRDRKPAQALRLYGDEDDDGILSTDFSAL

Sequences:

>Translated_118_residues
MPYALRHADGRVLSLHRHPEAGAEFLPPDHPEVQAFVGAGSTPQSEFAKLDADVVRVLEDLIDVLIARQVLRITDLPVQA
QEKLYARKSFRDRKPAQALRLYGDEDDDGILSTDFSAL
>Mature_117_residues
PYALRHADGRVLSLHRHPEAGAEFLPPDHPEVQAFVGAGSTPQSEFAKLDADVVRVLEDLIDVLIARQVLRITDLPVQAQ
EKLYARKSFRDRKPAQALRLYGDEDDDGILSTDFSAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13149; Mature: 13018

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYALRHADGRVLSLHRHPEAGAEFLPPDHPEVQAFVGAGSTPQSEFAKLDADVVRVLED
CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH
LIDVLIARQVLRITDLPVQAQEKLYARKSFRDRKPAQALRLYGDEDDDGILSTDFSAL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEECCCCCCC
>Mature Secondary Structure 
PYALRHADGRVLSLHRHPEAGAEFLPPDHPEVQAFVGAGSTPQSEFAKLDADVVRVLED
CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH
LIDVLIARQVLRITDLPVQAQEKLYARKSFRDRKPAQALRLYGDEDDDGILSTDFSAL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA