Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is ampH [C]
Identifier: 124265587
GI number: 124265587
Start: 426436
End: 427629
Strand: Direct
Name: ampH [C]
Synonym: Mpe_A0394
Alternate gene names: 124265587
Gene position: 426436-427629 (Clockwise)
Preceding gene: 124265586
Following gene: 124265588
Centisome position: 10.54
GC content: 70.52
Gene sequence:
>1194_bases ATGAACAAAGACAGGCTGGGCAGCGCGCTCGACGCGCTGCTGGATCGCAGCGTGCTGCAACCAGGCGGCGTGCCCGGCGT GGTGGCCATGGCCACCGACCGCAAGGCCGACGTCTACCGCGGCGCGGCGGGCGTGCTGCAGCTGGGCCAGGACGCTCCGA TGTCGACCGACAGCGTGTTCGCCATCTTCTCCACCACCAAGCCGCTGACCGCCACGCTGGTGATGCAGCTGGTGGAGGAG GGCGAGCTCGCGCTCGACGACGAGGCCGGCCGCTACGCGCCCGAGATCGACGAGCTGCAGGTGCTCGACGGCTTCGATGC GGCCGGGCAGCCGCGGCTGCGCGCGCCCAGGCGCCGGATCACGGTGCGCGACCTGATGCTGCACACCTCGGGCCTGTGCT ACGAGTTCTTCAGCGCCGACGACCTGAAGTTCCGCGCCGCGCGCGGCATTCCCACCGTGGTGTCGTGCAGCCTCGACTCG ATCCGCACCGTGCTGCTGCACGACCCCGGCGAGGCCTGGACCTACGGCGTCAACATCGACTGGATCGGCCGCATCGTGGA AAAGCTGCGCGGCGACCGGCTGGGCCACGTGATGCGCGAGCGGCTGTTCGACCCGCTGGGCATGGAGGAGATCGGCTTCG GGATGTCGGATGACATGCAGCCGCGCCGCGCCGTCATCCATGCGCGTGCCGACGATGGCACGCTCACGCCGCAGCCCGAC CTGAAACTGCCCGACCCGCCGCCGATGGACATGGGCGGCCAGGGCCTGTACGCGACGGTGGGCGAGTACATGAAGTTCAT CCGCATGCTGCTCAACGACGGCAGCGGGCCGTTCGGTCGGGTGCTGAGGCCGGAGACGGTGGACGCGCTGGCGCAGGACG GGCTGAAGGCCCTGGGCCTGTCGGCGGGTGGGTGGACCACGTCGATCCCCTCGCTGGCCAACACCGGCGAGTTCCTGCCC GGCACCGACAAGGGCTGGGCCTACAGCTTCATGACCAACCGGGAGCGCGCGCCCACCGGCCGCAGCGCCGGTTCGCTGAT GTGGGCGGGCCTGGCCAACTGCTTCTTCTGGGCCGACCGCCGGGCCGGCATCGGCGGCTACTGGGCCACGCAGATCCTGC CGCTGATGGACGCCGCGTCCTACCCGGGCTTCGTGGAGTTCGAGTCCACCGTCTACCAGCACCGCAGCGCATGA
Upstream 100 bases:
>100_bases CTATGCCGGCGGCGTGGGCAACTATCACCGGCAGTGCGACGAGCAGGCGGCCATGGGCTACCCCGGCTTCGCCATGCGCT GAGCGCCAGGGAGACCCGCC
Downstream 100 bases:
>100_bases CCGACTACGCCACCTTCTACCGCCGCTCGATCGAAGACCCGAAGGGTTTCTGGGCCGAGCAGGCCGAGCTGATCGACTGG CACCGCCCGTTCGACGAAGT
Product: putative 1,4-butanediol diacrylate esterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MNKDRLGSALDALLDRSVLQPGGVPGVVAMATDRKADVYRGAAGVLQLGQDAPMSTDSVFAIFSTTKPLTATLVMQLVEE GELALDDEAGRYAPEIDELQVLDGFDAAGQPRLRAPRRRITVRDLMLHTSGLCYEFFSADDLKFRAARGIPTVVSCSLDS IRTVLLHDPGEAWTYGVNIDWIGRIVEKLRGDRLGHVMRERLFDPLGMEEIGFGMSDDMQPRRAVIHARADDGTLTPQPD LKLPDPPPMDMGGQGLYATVGEYMKFIRMLLNDGSGPFGRVLRPETVDALAQDGLKALGLSAGGWTTSIPSLANTGEFLP GTDKGWAYSFMTNRERAPTGRSAGSLMWAGLANCFFWADRRAGIGGYWATQILPLMDAASYPGFVEFESTVYQHRSA
Sequences:
>Translated_397_residues MNKDRLGSALDALLDRSVLQPGGVPGVVAMATDRKADVYRGAAGVLQLGQDAPMSTDSVFAIFSTTKPLTATLVMQLVEE GELALDDEAGRYAPEIDELQVLDGFDAAGQPRLRAPRRRITVRDLMLHTSGLCYEFFSADDLKFRAARGIPTVVSCSLDS IRTVLLHDPGEAWTYGVNIDWIGRIVEKLRGDRLGHVMRERLFDPLGMEEIGFGMSDDMQPRRAVIHARADDGTLTPQPD LKLPDPPPMDMGGQGLYATVGEYMKFIRMLLNDGSGPFGRVLRPETVDALAQDGLKALGLSAGGWTTSIPSLANTGEFLP GTDKGWAYSFMTNRERAPTGRSAGSLMWAGLANCFFWADRRAGIGGYWATQILPLMDAASYPGFVEFESTVYQHRSA >Mature_397_residues MNKDRLGSALDALLDRSVLQPGGVPGVVAMATDRKADVYRGAAGVLQLGQDAPMSTDSVFAIFSTTKPLTATLVMQLVEE GELALDDEAGRYAPEIDELQVLDGFDAAGQPRLRAPRRRITVRDLMLHTSGLCYEFFSADDLKFRAARGIPTVVSCSLDS IRTVLLHDPGEAWTYGVNIDWIGRIVEKLRGDRLGHVMRERLFDPLGMEEIGFGMSDDMQPRRAVIHARADDGTLTPQPD LKLPDPPPMDMGGQGLYATVGEYMKFIRMLLNDGSGPFGRVLRPETVDALAQDGLKALGLSAGGWTTSIPSLANTGEFLP GTDKGWAYSFMTNRERAPTGRSAGSLMWAGLANCFFWADRRAGIGGYWATQILPLMDAASYPGFVEFESTVYQHRSA
Specific function: Binds Penicillin And Contributes To The Normal Morphology Of Escherichia Coli. [C]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI115533026, Length=237, Percent_Identity=27.0042194092827, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 43254; Mature: 43254
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKDRLGSALDALLDRSVLQPGGVPGVVAMATDRKADVYRGAAGVLQLGQDAPMSTDSVF CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHCCHHHHHCCCCCCCCCCCEE AIFSTTKPLTATLVMQLVEEGELALDDEAGRYAPEIDELQVLDGFDAAGQPRLRAPRRRI EEEECCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHEEEECCCCCCCCCCCCCCHHHH TVRDLMLHTSGLCYEFFSADDLKFRAARGIPTVVSCSLDSIRTVLLHDPGEAWTYGVNID HHHHHHHHHCCCEEECCCCCCCEEEHHCCCCCEEECCHHHHEEEEEECCCCCEEEECCHH WIGRIVEKLRGDRLGHVMRERLFDPLGMEEIGFGMSDDMQPRRAVIHARADDGTLTPQPD HHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCC LKLPDPPPMDMGGQGLYATVGEYMKFIRMLLNDGSGPFGRVLRPETVDALAQDGLKALGL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHCC SAGGWTTSIPSLANTGEFLPGTDKGWAYSFMTNRERAPTGRSAGSLMWAGLANCFFWADR CCCCCCCCCCCHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC RAGIGGYWATQILPLMDAASYPGFVEFESTVYQHRSA CCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCC >Mature Secondary Structure MNKDRLGSALDALLDRSVLQPGGVPGVVAMATDRKADVYRGAAGVLQLGQDAPMSTDSVF CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHCCHHHHHCCCCCCCCCCCEE AIFSTTKPLTATLVMQLVEEGELALDDEAGRYAPEIDELQVLDGFDAAGQPRLRAPRRRI EEEECCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHEEEECCCCCCCCCCCCCCHHHH TVRDLMLHTSGLCYEFFSADDLKFRAARGIPTVVSCSLDSIRTVLLHDPGEAWTYGVNID HHHHHHHHHCCCEEECCCCCCCEEEHHCCCCCEEECCHHHHEEEEEECCCCCEEEECCHH WIGRIVEKLRGDRLGHVMRERLFDPLGMEEIGFGMSDDMQPRRAVIHARADDGTLTPQPD HHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCC LKLPDPPPMDMGGQGLYATVGEYMKFIRMLLNDGSGPFGRVLRPETVDALAQDGLKALGL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHCC SAGGWTTSIPSLANTGEFLPGTDKGWAYSFMTNRERAPTGRSAGSLMWAGLANCFFWADR CCCCCCCCCCCHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC RAGIGGYWATQILPLMDAASYPGFVEFESTVYQHRSA CCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]