Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124265535

Identifier: 124265535

GI number: 124265535

Start: 376372

End: 376716

Strand: Direct

Name: 124265535

Synonym: Mpe_A0342

Alternate gene names: NA

Gene position: 376372-376716 (Clockwise)

Preceding gene: 124265534

Following gene: 124265536

Centisome position: 9.31

GC content: 72.75

Gene sequence:

>345_bases
ATGCCGGCCGCGATGACCCGCGCCCGTGCGGCCGTGTTCGCCGCGCTGCTGGCGGCCGTTCTGCTGCCGGGGCCGGTGGC
CCGAGCGCAGGCGCCCGAAGGCGGCGCGAGCGCCGCGCTGGGGCGCTCGCTCTACACCAGCTACTGCGCGCGCTGTCACG
GCGTGAACATGGTCAGCAACGGTGCCAGCTTCGACCTGCGCAGCTTCCCGAAGGAACAGCGCGAGCGCTTCGAACGATCG
GTGACGCAGGGGCTGCGTGCCATGCCGGCCTGGGGCTCGACCTTCCAGCCGGACGAACTGGCGTCGCTGTGGCTGTTCGT
CAGTGCTGCCGCCAGCCCGCCGTGA

Upstream 100 bases:

>100_bases
CCAGCGGCGCCGCCACCGTGTACGGCTTCCTCGGCGGTGATGCCAAGCTGGCGCAGGTGCCGGCGGGCTCGTCGGTGTGG
ACCTTCAGGCTGATCGACTG

Downstream 100 bases:

>100_bases
AGGCGGCGAAGCGGTGGGGCCGTGTCGCGGCCGGACCGGGTAGACCCGCTTCGGTTTCTCCCTCTGGCGGCCCTGCAGGG
GCCGCCCCTAGCATCGATGC

Product: putative cytochrome c55X

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MPAAMTRARAAVFAALLAAVLLPGPVARAQAPEGGASAALGRSLYTSYCARCHGVNMVSNGASFDLRSFPKEQRERFERS
VTQGLRAMPAWGSTFQPDELASLWLFVSAAASPP

Sequences:

>Translated_114_residues
MPAAMTRARAAVFAALLAAVLLPGPVARAQAPEGGASAALGRSLYTSYCARCHGVNMVSNGASFDLRSFPKEQRERFERS
VTQGLRAMPAWGSTFQPDELASLWLFVSAAASPP
>Mature_113_residues
PAAMTRARAAVFAALLAAVLLPGPVARAQAPEGGASAALGRSLYTSYCARCHGVNMVSNGASFDLRSFPKEQRERFERSV
TQGLRAMPAWGSTFQPDELASLWLFVSAAASPP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12041; Mature: 11910

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAAMTRARAAVFAALLAAVLLPGPVARAQAPEGGASAALGRSLYTSYCARCHGVNMVSN
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
GASFDLRSFPKEQRERFERSVTQGLRAMPAWGSTFQPDELASLWLFVSAAASPP
CCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PAAMTRARAAVFAALLAAVLLPGPVARAQAPEGGASAALGRSLYTSYCARCHGVNMVSN
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
GASFDLRSFPKEQRERFERSVTQGLRAMPAWGSTFQPDELASLWLFVSAAASPP
CCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA