Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is yghZ [H]

Identifier: 124265448

GI number: 124265448

Start: 276503

End: 277495

Strand: Direct

Name: yghZ [H]

Synonym: Mpe_A0255

Alternate gene names: 124265448

Gene position: 276503-277495 (Clockwise)

Preceding gene: 124265446

Following gene: 124265452

Centisome position: 6.84

GC content: 67.57

Gene sequence:

>993_bases
ATGCAATACCGCCGTCTCGGCCGCTCGGGCCTGCAGGTCAGTGAACTGTCGCTCGGGTCCTGGGTGACCTATCACAACCA
GGTCGATGTGAGCGCCGCGAAGGACATGCTCGCGGCTGCCTTCGATGCCGGCGTCAACTTCTTCGACAACGCCGAGATCT
ATGCCAACGGCCGCAGCGAGTCGATCATGGGCGAGGCGCTGCGCCAGCTCGGGCTGCCACGGCTCGACGTTGTCGTGTCG
ACCAAGTTCTTCTGGGGACTGGACCGTGCGAAACCGGGCGAGCGGCCGCGCATCAACGGACAGGACACGCTGAATCGCAA
ATACCTGCACCAGGCGATCGACGGCGCGCTGCGGCGGCTGCAGCTTGATTTCGTCGACCTCGTGTTCTGCCACCGGCCCG
ACCCGCACACCCCGATCGAGGAGACGGTTTGGGCCTTCCACGACCTCATCACCCGCGGCAAGCTGCTCTACTGGGGCACC
AGCGAATGGAGCGCCCAGGAGATCCGTGCCGCCTGGGAGATCGCGGACCGGCACCACCTGCACAAGCCGGTGATGGAGCA
GCCGCAGTACCACCTGTTCCACCGCCGCCGCGTCGAGGAGGAGTACGCGCGGCTCTATGAGGACATCGGGCTGGGCCTGA
CCACCTGGAGCCCGTTGGCGAGCGGCCTACTGACTGGCAAGTACCGACGCGGCATCCCCGAGGGCAGCCGTGGCGCGCTC
GAGAACATGGCCTTCCTGCGCGACGGCCTCACGGATCCGGCGAAGAACGCCGCGGTCGGCCAGCTCGAGGAGATTGCCGC
CGATCTGGGCGGCACGGTCGCGCAGCTCGCGATCGCCTGGGCGAACCGCAATCCGCGCGTCAGCACCGTGATCCTCGGGG
CCAGCCGCATCGCACAGCTGCAAGACAACCTGAAGGCCTTGACGCTCGCGCCGCGGCTCACGCCGGAGGTGCTGGCACGG
ATCGACGCGGTGACGAAGCCGCTGGCAGCCTGA

Upstream 100 bases:

>100_bases
GGCGATGCGGTTCTGGGTACGCTTGCAGTGTAGTGAGCGCGGCAGGGGCAAGGTGCCCGCCGCGCGCGGTACCGATCATC
GAAGACCAGGAGTCCCTCTC

Downstream 100 bases:

>100_bases
ACCGGCTCAGCCCGGTCCGCCGCGGTTCAGCGCCAGCGGATCGATGCGGTTCGACGGGTGCACCGGTACCGGCTCCAGCA
TGGCGCGGCGCGCCGCCGAG

Product: aldo/keto reductase family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MQYRRLGRSGLQVSELSLGSWVTYHNQVDVSAAKDMLAAAFDAGVNFFDNAEIYANGRSESIMGEALRQLGLPRLDVVVS
TKFFWGLDRAKPGERPRINGQDTLNRKYLHQAIDGALRRLQLDFVDLVFCHRPDPHTPIEETVWAFHDLITRGKLLYWGT
SEWSAQEIRAAWEIADRHHLHKPVMEQPQYHLFHRRRVEEEYARLYEDIGLGLTTWSPLASGLLTGKYRRGIPEGSRGAL
ENMAFLRDGLTDPAKNAAVGQLEEIAADLGGTVAQLAIAWANRNPRVSTVILGASRIAQLQDNLKALTLAPRLTPEVLAR
IDAVTKPLAA

Sequences:

>Translated_330_residues
MQYRRLGRSGLQVSELSLGSWVTYHNQVDVSAAKDMLAAAFDAGVNFFDNAEIYANGRSESIMGEALRQLGLPRLDVVVS
TKFFWGLDRAKPGERPRINGQDTLNRKYLHQAIDGALRRLQLDFVDLVFCHRPDPHTPIEETVWAFHDLITRGKLLYWGT
SEWSAQEIRAAWEIADRHHLHKPVMEQPQYHLFHRRRVEEEYARLYEDIGLGLTTWSPLASGLLTGKYRRGIPEGSRGAL
ENMAFLRDGLTDPAKNAAVGQLEEIAADLGGTVAQLAIAWANRNPRVSTVILGASRIAQLQDNLKALTLAPRLTPEVLAR
IDAVTKPLAA
>Mature_330_residues
MQYRRLGRSGLQVSELSLGSWVTYHNQVDVSAAKDMLAAAFDAGVNFFDNAEIYANGRSESIMGEALRQLGLPRLDVVVS
TKFFWGLDRAKPGERPRINGQDTLNRKYLHQAIDGALRRLQLDFVDLVFCHRPDPHTPIEETVWAFHDLITRGKLLYWGT
SEWSAQEIRAAWEIADRHHLHKPVMEQPQYHLFHRRRVEEEYARLYEDIGLGLTTWSPLASGLLTGKYRRGIPEGSRGAL
ENMAFLRDGLTDPAKNAAVGQLEEIAADLGGTVAQLAIAWANRNPRVSTVILGASRIAQLQDNLKALTLAPRLTPEVLAR
IDAVTKPLAA

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI27436969, Length=327, Percent_Identity=41.8960244648318, Blast_Score=286, Evalue=2e-77,
Organism=Homo sapiens, GI4504825, Length=325, Percent_Identity=41.8461538461538, Blast_Score=285, Evalue=4e-77,
Organism=Homo sapiens, GI27436964, Length=329, Percent_Identity=41.6413373860182, Blast_Score=284, Evalue=1e-76,
Organism=Homo sapiens, GI27436962, Length=329, Percent_Identity=41.6413373860182, Blast_Score=282, Evalue=3e-76,
Organism=Homo sapiens, GI27436966, Length=329, Percent_Identity=41.3373860182371, Blast_Score=280, Evalue=1e-75,
Organism=Homo sapiens, GI27436971, Length=327, Percent_Identity=43.1192660550459, Blast_Score=268, Evalue=4e-72,
Organism=Homo sapiens, GI223718702, Length=312, Percent_Identity=27.8846153846154, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI41152114, Length=315, Percent_Identity=29.2063492063492, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI41327764, Length=301, Percent_Identity=29.2358803986711, Blast_Score=81, Evalue=1e-15,
Organism=Escherichia coli, GI1789375, Length=327, Percent_Identity=34.8623853211009, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI87081735, Length=337, Percent_Identity=33.8278931750742, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1789199, Length=349, Percent_Identity=31.2320916905444, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1788070, Length=328, Percent_Identity=28.6585365853659, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1788081, Length=323, Percent_Identity=26.9349845201238, Blast_Score=77, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6325169, Length=342, Percent_Identity=26.6081871345029, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6323998, Length=330, Percent_Identity=26.6666666666667, Blast_Score=101, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6319958, Length=294, Percent_Identity=25.8503401360544, Blast_Score=94, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6319951, Length=340, Percent_Identity=26.4705882352941, Blast_Score=93, Evalue=7e-20,
Organism=Saccharomyces cerevisiae, GI6322615, Length=256, Percent_Identity=24.609375, Blast_Score=77, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6321052, Length=162, Percent_Identity=30.2469135802469, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24640980, Length=350, Percent_Identity=30, Blast_Score=176, Evalue=2e-44,
Organism=Drosophila melanogaster, GI45549126, Length=353, Percent_Identity=30.028328611898, Blast_Score=175, Evalue=3e-44,
Organism=Drosophila melanogaster, GI24646155, Length=232, Percent_Identity=28.8793103448276, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24646159, Length=256, Percent_Identity=24.609375, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR005399
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: NA

Molecular weight: Translated: 36937; Mature: 36937

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYRRLGRSGLQVSELSLGSWVTYHNQVDVSAAKDMLAAAFDAGVNFFDNAEIYANGRSE
CCHHHHCCCCCEEEHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCH
SIMGEALRQLGLPRLDVVVSTKFFWGLDRAKPGERPRINGQDTLNRKYLHQAIDGALRRL
HHHHHHHHHHCCCHHHHEEEHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QLDFVDLVFCHRPDPHTPIEETVWAFHDLITRGKLLYWGTSEWSAQEIRAAWEIADRHHL
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHH
HKPVMEQPQYHLFHRRRVEEEYARLYEDIGLGLTTWSPLASGLLTGKYRRGIPEGSRGAL
HCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHH
ENMAFLRDGLTDPAKNAAVGQLEEIAADLGGTVAQLAIAWANRNPRVSTVILGASRIAQL
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEECHHHHHHH
QDNLKALTLAPRLTPEVLARIDAVTKPLAA
HHCHHHEEECCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQYRRLGRSGLQVSELSLGSWVTYHNQVDVSAAKDMLAAAFDAGVNFFDNAEIYANGRSE
CCHHHHCCCCCEEEHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCH
SIMGEALRQLGLPRLDVVVSTKFFWGLDRAKPGERPRINGQDTLNRKYLHQAIDGALRRL
HHHHHHHHHHCCCHHHHEEEHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QLDFVDLVFCHRPDPHTPIEETVWAFHDLITRGKLLYWGTSEWSAQEIRAAWEIADRHHL
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHH
HKPVMEQPQYHLFHRRRVEEEYARLYEDIGLGLTTWSPLASGLLTGKYRRGIPEGSRGAL
HCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHH
ENMAFLRDGLTDPAKNAAVGQLEEIAADLGGTVAQLAIAWANRNPRVSTVILGASRIAQL
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEECHHHHHHH
QDNLKALTLAPRLTPEVLARIDAVTKPLAA
HHCHHHEEECCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]