Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is fur [H]
Identifier: 124265416
GI number: 124265416
Start: 240781
End: 241218
Strand: Direct
Name: fur [H]
Synonym: Mpe_A0223
Alternate gene names: 124265416
Gene position: 240781-241218 (Clockwise)
Preceding gene: 124265406
Following gene: 124265420
Centisome position: 5.95
GC content: 64.84
Gene sequence:
>438_bases ATGACCACCCATGCCGAAGACCTCAAGAGCAGCGGACTCAAGGCCACCCTGCCGCGCCTCAAGATCCTCGAGGTGTTCCA GACCTCGGCGGTGCGCCACCTGACGGCCGAGGACGTCTACAAGCACTTGCTGGCCGACGGTTCCGACATCGGCCTGGCCA CGGTCTACCGGGTGCTGATGCAGTTCGAGCAGGCCGGCATCCTGTCTCGCAATCACTTCGAGTCGGGCAAGTCGGTGTTC GAGCTCAACGAGGGCAAGCACCATGACCATCTGGTGTGCGTCGTGTGCGGGCGGGTCGAGGAGTTCTACGACGCCGAGAT CGAGAAGCGCCAGCTGCAGATTGCCCGCGAGCGAGGCTACGAGCTGCAGGACCACTCGCTCGCGCTCTACGTGATCTGCG GGCGCGACGGCTGCAAGGGCAGCAACTCGCCGCGCTGA
Upstream 100 bases:
>100_bases GGGCCGCTGCGAGAGCGACGGGGTGCCCGCCGCACCAGGGCCGCAGGCTCGATATGATCCAAGAATTCTAGTGGAGCCCA CCTGCCCCGAGGACCTGCCG
Downstream 100 bases:
>100_bases CCGACGTTCAGATCGGTTCGTCGCCTTCCATCGCGATGCGATGGCGGGCGATGAACTCCTGGTAGGTGTCGATGCCGCGC AGCTTCAGGATGGTGTTGCG
Product: transcriptional regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MTTHAEDLKSSGLKATLPRLKILEVFQTSAVRHLTAEDVYKHLLADGSDIGLATVYRVLMQFEQAGILSRNHFESGKSVF ELNEGKHHDHLVCVVCGRVEEFYDAEIEKRQLQIARERGYELQDHSLALYVICGRDGCKGSNSPR
Sequences:
>Translated_145_residues MTTHAEDLKSSGLKATLPRLKILEVFQTSAVRHLTAEDVYKHLLADGSDIGLATVYRVLMQFEQAGILSRNHFESGKSVF ELNEGKHHDHLVCVVCGRVEEFYDAEIEKRQLQIARERGYELQDHSLALYVICGRDGCKGSNSPR >Mature_144_residues TTHAEDLKSSGLKATLPRLKILEVFQTSAVRHLTAEDVYKHLLADGSDIGLATVYRVLMQFEQAGILSRNHFESGKSVFE LNEGKHHDHLVCVVCGRVEEFYDAEIEKRQLQIARERGYELQDHSLALYVICGRDGCKGSNSPR
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulator for biosynthesis of the siderophore alcaligin E [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=139, Percent_Identity=56.1151079136691, Blast_Score=155, Evalue=1e-39,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16343; Mature: 16212
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHAEDLKSSGLKATLPRLKILEVFQTSAVRHLTAEDVYKHLLADGSDIGLATVYRVLM CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHH QFEQAGILSRNHFESGKSVFELNEGKHHDHLVCVVCGRVEEFYDAEIEKRQLQIARERGY HHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCC ELQDHSLALYVICGRDGCKGSNSPR CCCCCCEEEEEEECCCCCCCCCCCC >Mature Secondary Structure TTHAEDLKSSGLKATLPRLKILEVFQTSAVRHLTAEDVYKHLLADGSDIGLATVYRVLM CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHH QFEQAGILSRNHFESGKSVFELNEGKHHDHLVCVVCGRVEEFYDAEIEKRQLQIARERGY HHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCC ELQDHSLALYVICGRDGCKGSNSPR CCCCCCEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA