Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is phnB [H]

Identifier: 124265222

GI number: 124265222

Start: 30888

End: 31310

Strand: Reverse

Name: phnB [H]

Synonym: Mpe_A0029

Alternate gene names: 124265222

Gene position: 31310-30888 (Counterclockwise)

Preceding gene: 124265223

Following gene: 124265221

Centisome position: 0.77

GC content: 68.79

Gene sequence:

>423_bases
ATGACCCAAGCCATCGCCTACCTCGGATTCAACGGCAACTGCGCCGACGCCATGCGCTTCTACGAGCGCGCGCTGAACGG
CAAGCTCGAAGTGCTGATGAGCGGCGCGGACTCGCCGATGGCCGAGCAGATGCCCAAGCAGTTCCTGCACCGCATCCTGC
ATGCCCGCCTGGTGCTGCCCGGCGGCGGCATGCTCTATGCCGGCGACTGCCCGGCCGACCAGCCCTTCGAGGGCATCAAG
GGCGTGTCGATCGCCGTGGACTACCCGAGCGTCGACGAGGCCGAGGCCGTGTTCGCGGCGCTGGCCGACGGCGGCCAGGT
CACGATGCCGATGCAGCCCGCGTTCTGGGCGCGCCGCTGGGGCATGCTGATCGACAGGTTCGGCACGCCGTGGATCGTCA
ACGGCGAGCTGCTGCCGTTCTGA

Upstream 100 bases:

>100_bases
CCTTCTACCGCTGAAACCCGCGGGGCTGTCGATTCCGGGGCCGCCCGTTCGTCGTGGTCGTGCAAGCCTGCCACCGACCT
TCCTTCCCAGGAGCCCCGAC

Downstream 100 bases:

>100_bases
GCCCCGGCACGGCGCGGGCTCCGGGGCGGTGTCGCTATGCGATAACCATAGTTCCCAATCCGCCTCCGAGCGCCTAGGCT
GCCGGCTCCCGCCACCCCCT

Product: PhnB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTQAIAYLGFNGNCADAMRFYERALNGKLEVLMSGADSPMAEQMPKQFLHRILHARLVLPGGGMLYAGDCPADQPFEGIK
GVSIAVDYPSVDEAEAVFAALADGGQVTMPMQPAFWARRWGMLIDRFGTPWIVNGELLPF

Sequences:

>Translated_140_residues
MTQAIAYLGFNGNCADAMRFYERALNGKLEVLMSGADSPMAEQMPKQFLHRILHARLVLPGGGMLYAGDCPADQPFEGIK
GVSIAVDYPSVDEAEAVFAALADGGQVTMPMQPAFWARRWGMLIDRFGTPWIVNGELLPF
>Mature_139_residues
TQAIAYLGFNGNCADAMRFYERALNGKLEVLMSGADSPMAEQMPKQFLHRILHARLVLPGGGMLYAGDCPADQPFEGIKG
VSIAVDYPSVDEAEAVFAALADGGQVTMPMQPAFWARRWGMLIDRFGTPWIVNGELLPF

Specific function: Unknown

COG id: COG2764

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790546, Length=136, Percent_Identity=32.3529411764706, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15297; Mature: 15166

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQAIAYLGFNGNCADAMRFYERALNGKLEVLMSGADSPMAEQMPKQFLHRILHARLVLP
CCCEEEEECCCCCHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHEEECC
GGGMLYAGDCPADQPFEGIKGVSIAVDYPSVDEAEAVFAALADGGQVTMPMQPAFWARRW
CCCEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHH
GMLIDRFGTPWIVNGELLPF
HHHHHHCCCCEEECCCCCCC
>Mature Secondary Structure 
TQAIAYLGFNGNCADAMRFYERALNGKLEVLMSGADSPMAEQMPKQFLHRILHARLVLP
CCEEEEECCCCCHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHEEECC
GGGMLYAGDCPADQPFEGIKGVSIAVDYPSVDEAEAVFAALADGGQVTMPMQPAFWARRW
CCCEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHH
GMLIDRFGTPWIVNGELLPF
HHHHHHCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2155230; 7610040; 9278503 [H]