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The map label for this gene is 124265212

Identifier: 124265212

GI number: 124265212

Start: 21840

End: 23126

Strand: Reverse

Name: 124265212

Synonym: Mpe_A0019

Alternate gene names: NA

Gene position: 23126-21840 (Counterclockwise)

Preceding gene: 124265213

Following gene: 124265209

Centisome position: 0.57

GC content: 75.06

Gene sequence:

>1287_bases
GTGGCGACGACCGACACGCAGCGCGCGATCGATGCCGTCTGGCGCATCGAATCGGCGAAGATCGTCGCCGTGGTCGCGCG
CATGGTGCGCGACGTCGGCGTGGCCGAGGAGCTGGCGCAGGATGCGCTGGTCGCCGCGCTCGAGCACTGGCCCGTCGACG
GCCTGCCCGACAAGCCCGGGGCCTGGCTGATGACCACCGCCAAGCACCGCGCGCTCGACCGGCTGCGGCAGGACGCGCTG
CACGCGCGCAAGCAGCAGGAGCTCGGCGCCGACCTCGACGCGCTGCAGGCGGGCGTGGTGCCGGACTTCGTGGACGCGCT
CGACGCGGCACGCCAGGACGACATCGGCGACGACCTGCTGCGCCTGATCTTCACCGCCTGCCATCCGGTGCTCGGCACCG
AGGCGCGCGTGGCCCTCACACTGCGCCTGCTGGGCGGGCTGAGCACCGACGAGATCGCGCGCGCCTTCCTGGCGCCGGAG
GCGACGATCGCGCAGCGCATCGTGCGCGCCAAGCGCACGCTGAGCGCGGCCCGCGTGCCCTTCGAGGTGCCGCAGGCGCA
GGAACGCGCGCCGCGCCTGGCCTCGGTGCTGGAGGTGGTCTACCTGATCTTCAACGAGGGCTACTCGGCCACCGCCGGCG
ACGACTGGATGCGCCCGGCGCTGTGCGACGAAGCGCTGCGCCTGGGCCGCGTGCTGGCCGGGCTGGCGCCCGACGAGCCC
GAGGTGCACGGCCTGGTGGCGCTGATGGAGATCCAGTCCTCGCGCACCGCGGCCCGCACCGATGCGCGAGGGCGGCCGGT
GCTGCTGCTCGACCAAGATCGCACGCGCTGGGACCCGCTGCTGATCCGCCGCGGCCTGGCCGCGCTGGAGCGCGCCACGG
CGCTGGGCGGCCTGCGCGGGCCGTATGCGCTGCAGGCGGCGCTCGCGGCCTGCCATGCGCGCGCGGCGAAGGCGGCCGAC
ACCGACTGGCCGCTGATCGTGGCGCTCTACGACGCGCTGGCCCAGGTGGCGCCGTCGCCGGTGGTCGAGCTCAACCGCGC
GGTCGCGGTCGGCATGGCCTTCGGACCAACAGCGGGGCTGGAAATCGTCGACACGGTCGCATCGAGCCCGGCGCTCGCCG
GCTACCCCTGGTTGCCGAGCGTGCGCGGCGACCTGCTCGCCAAGCTGGGCCGCCATGACGAGGCGCGCGCGGAGTTCGAG
CGCGCCGCGGCGCTGACGCGCAATGGGCGCGAGCGCGAGCTGCTGCTGGAGCGGGCGGCTCAGTCGCGCGATGCCGGCCG
CAGGTAG

Upstream 100 bases:

>100_bases
ACGGTCACGGCTACGAGGACCTCGACGGCCACATCTGGGAGCTGGTGCACATGAGCGGCGATCCCTCGGCCGCCGGCGCG
GCCTGAACCGCACGCGGCCA

Downstream 100 bases:

>100_bases
ATCACCCAGTAGACCAGCGCGACCAGCACGCCACCGCCGACCAGATTGCCGGCGATCACCGCCAGCAGGTTGCCCGCGAT
GTCGCCGGCAGCCAGCGGCG

Product: putative RNA polymerase sigma factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MATTDTQRAIDAVWRIESAKIVAVVARMVRDVGVAEELAQDALVAALEHWPVDGLPDKPGAWLMTTAKHRALDRLRQDAL
HARKQQELGADLDALQAGVVPDFVDALDAARQDDIGDDLLRLIFTACHPVLGTEARVALTLRLLGGLSTDEIARAFLAPE
ATIAQRIVRAKRTLSAARVPFEVPQAQERAPRLASVLEVVYLIFNEGYSATAGDDWMRPALCDEALRLGRVLAGLAPDEP
EVHGLVALMEIQSSRTAARTDARGRPVLLLDQDRTRWDPLLIRRGLAALERATALGGLRGPYALQAALAACHARAAKAAD
TDWPLIVALYDALAQVAPSPVVELNRAVAVGMAFGPTAGLEIVDTVASSPALAGYPWLPSVRGDLLAKLGRHDEARAEFE
RAAALTRNGRERELLLERAAQSRDAGRR

Sequences:

>Translated_428_residues
MATTDTQRAIDAVWRIESAKIVAVVARMVRDVGVAEELAQDALVAALEHWPVDGLPDKPGAWLMTTAKHRALDRLRQDAL
HARKQQELGADLDALQAGVVPDFVDALDAARQDDIGDDLLRLIFTACHPVLGTEARVALTLRLLGGLSTDEIARAFLAPE
ATIAQRIVRAKRTLSAARVPFEVPQAQERAPRLASVLEVVYLIFNEGYSATAGDDWMRPALCDEALRLGRVLAGLAPDEP
EVHGLVALMEIQSSRTAARTDARGRPVLLLDQDRTRWDPLLIRRGLAALERATALGGLRGPYALQAALAACHARAAKAAD
TDWPLIVALYDALAQVAPSPVVELNRAVAVGMAFGPTAGLEIVDTVASSPALAGYPWLPSVRGDLLAKLGRHDEARAEFE
RAAALTRNGRERELLLERAAQSRDAGRR
>Mature_427_residues
ATTDTQRAIDAVWRIESAKIVAVVARMVRDVGVAEELAQDALVAALEHWPVDGLPDKPGAWLMTTAKHRALDRLRQDALH
ARKQQELGADLDALQAGVVPDFVDALDAARQDDIGDDLLRLIFTACHPVLGTEARVALTLRLLGGLSTDEIARAFLAPEA
TIAQRIVRAKRTLSAARVPFEVPQAQERAPRLASVLEVVYLIFNEGYSATAGDDWMRPALCDEALRLGRVLAGLAPDEPE
VHGLVALMEIQSSRTAARTDARGRPVLLLDQDRTRWDPLLIRRGLAALERATALGGLRGPYALQAALAACHARAAKAADT
DWPLIVALYDALAQVAPSPVVELNRAVAVGMAFGPTAGLEIVDTVASSPALAGYPWLPSVRGDLLAKLGRHDEARAEFER
AAALTRNGRERELLLERAAQSRDAGRR

Specific function: Unknown

COG id: COG4941

COG function: function code K; Predicted RNA polymerase sigma factor containing a TPR repeat domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008940
- InterPro:   IPR014284
- InterPro:   IPR007627
- InterPro:   IPR013249
- InterPro:   IPR013325
- InterPro:   IPR013324 [H]

Pfam domain/function: PF04542 Sigma70_r2; PF08281 Sigma70_r4_2 [H]

EC number: NA

Molecular weight: Translated: 46176; Mature: 46045

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTDTQRAIDAVWRIESAKIVAVVARMVRDVGVAEELAQDALVAALEHWPVDGLPDKPG
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
AWLMTTAKHRALDRLRQDALHARKQQELGADLDALQAGVVPDFVDALDAARQDDIGDDLL
CEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHH
RLIFTACHPVLGTEARVALTLRLLGGLSTDEIARAFLAPEATIAQRIVRAKRTLSAARVP
HHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
FEVPQAQERAPRLASVLEVVYLIFNEGYSATAGDDWMRPALCDEALRLGRVLAGLAPDEP
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
EVHGLVALMEIQSSRTAARTDARGRPVLLLDQDRTRWDPLLIRRGLAALERATALGGLRG
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PYALQAALAACHARAAKAADTDWPLIVALYDALAQVAPSPVVELNRAVAVGMAFGPTAGL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCH
EIVDTVASSPALAGYPWLPSVRGDLLAKLGRHDEARAEFERAAALTRNGRERELLLERAA
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
QSRDAGRR
HHCCCCCC
>Mature Secondary Structure 
ATTDTQRAIDAVWRIESAKIVAVVARMVRDVGVAEELAQDALVAALEHWPVDGLPDKPG
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
AWLMTTAKHRALDRLRQDALHARKQQELGADLDALQAGVVPDFVDALDAARQDDIGDDLL
CEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHH
RLIFTACHPVLGTEARVALTLRLLGGLSTDEIARAFLAPEATIAQRIVRAKRTLSAARVP
HHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
FEVPQAQERAPRLASVLEVVYLIFNEGYSATAGDDWMRPALCDEALRLGRVLAGLAPDEP
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
EVHGLVALMEIQSSRTAARTDARGRPVLLLDQDRTRWDPLLIRRGLAALERATALGGLRG
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PYALQAALAACHARAAKAADTDWPLIVALYDALAQVAPSPVVELNRAVAVGMAFGPTAGL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCH
EIVDTVASSPALAGYPWLPSVRGDLLAKLGRHDEARAEFERAAALTRNGRERELLLERAA
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
QSRDAGRR
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430; 7751302 [H]