Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124265209

Identifier: 124265209

GI number: 124265209

Start: 18623

End: 20065

Strand: Reverse

Name: 124265209

Synonym: Mpe_A0016

Alternate gene names: NA

Gene position: 20065-18623 (Counterclockwise)

Preceding gene: 124265212

Following gene: 124265202

Centisome position: 0.5

GC content: 74.5

Gene sequence:

>1443_bases
ATGACCGCGCAGCATCCCGCGCCGCCCTTCGACACGTGGCTGTGGATGCAGGCGTGGAGCGAGACCTGGTGCGCCGGGCT
CGACCCGGCGGGCGCGGGGCAGCGCCTGCGCGCTCAGCGGCTGGCGCGGCTGATCGACGCCACGCTGAGCGGCTCGCCGT
TCTACCGCCGGCGCCACCCCGGAGCGCACGAGCTCGCCGACTTCCGGCCGGTGAGCAAGGCCGAGCTGATGGCGCACTTC
GACGACTGGGCCACCGACCGCCGCATCACCCGCGCCGCCGCACAGGCCTTCGTGGCCGACCCGGCGTGCATCGCCGACGG
CTGGCTCGGCAACTATCTGCTGTGGACCAGCTCCGGCACCAGCGGCGAGCCCGGCGTGTTCGTGCAGGACGCGCGCAGCC
TGGCGGCCTACGACGCGATCGACGCGCTGCGGCTGCGCGGCGCCGGGCCCGGCCAGGTCTCGCTCGGCAGCTGGGGCGCG
CGCCAGCGCTTCGCCTTCGTGGGTGCCACCGGCGGCCACTTCGCCGGCGTGGTGAGCATGGAACGGCTGCGCCGTCTGGT
GCCGGCCGCGCTGGCACCGGAGATCCGCGTGCTCTCGGTGCTGGAGCCGCTGTGCGACGTGGCGCAGGCGCTGCAGGCCC
AGCAGCCCAGCGTGCTGATCACCTACCCGAGCTGCGCCGCCGCGCTGGCCCGGCTGCAGGAGGCCGGACAGCTGCGGCTG
GCCCTGAAGGAGGTGTGGACGGGCGGCGAGCAGCTCTCGGCCGAGCAGCGCCAGCAGATCCAGGCCGCCTTCGGCTGCCC
GGTGCGCAACAACTACGGCGCCTCGGAGTTCTTCACCATCGCGTGGGAGTGCGCCCACGGCGAGCTGCACCTGAACGACG
ACTGGCTGGTGCTGGAGCCGGTGGACGAGCGGCTGCGGCCGTTGCCGGTGGGCGAGATGTCGCACAGCACGCTGCTGACC
AACCTGGCCAACCTGACGCAGCCGCTGCTGCGCTACCAGCTCGGCGACCGCGTGCGCCGCGTGGCGGAGCGCTGCAGCTG
CGGCAGCGCCTTCCCGCTGATCGAGGTGCAGGGCCGCGCCGACGACACGCTGCGGTTGCGCGACGCGCAGCACCGGCCGG
TGACCATCCTGCCGCTGGCGCTGGAGACCGCGATCGAGGAGGGCGCGCACGTCACGCAGTTCCAGGCGCTGTGCGGCAGC
GATGGCGATTCGATCGAGCTGCGCTTCGAGGCCTCGGTGGGCGACGCGCGCGCGGCGTTCACGCAATCGCGGCGCGCGCT
CGCCGACTTCCTGGCGCACCACGGCGTGAGCGGCACGCGCATCTCGATGAGCGCGGCCGAGCCGCTGCGCCAGCGCGCAA
GCGGCAAGCTGCGCCGCGTGGTGATGCTGCCCGCTGCGCCGGTGCGTCGCAAGCCCCCGGCACGCGCGCCCGCTCGGCGC
TGA

Upstream 100 bases:

>100_bases
GATCGACACCGTAGGCCACGATGTCCCTGCGCGGCTTGATGTCCATCAACCAGAGCCCGCAGTGGCTGCCCATAATCGAC
CGCATGCCCGTCGCCCCACC

Downstream 100 bases:

>100_bases
GGCCTCCGCCTCTAATCGCGCCGCGCGATCAGCAACCCGACCAGCAGGCCCACGCCGGCGGCCACGCCGATCGCCACGTA
CGGGTGCTCATGCACCGCGT

Product: coenzyme F390 synthetase-like protein

Products: NA

Alternate protein names: CapK Protein; CapK Related-Protein; AMP-Dependent Synthetase And Ligase; Capsular Polysaccharide Biosynthesis Protein CapK; Adenylate-Forming; Capsular Polysaccharide Biosynthesis Protein; Phenylacetate-Co A Ligase; Co Synthetase; Phenylacetyl-CoA Ligase PaaK; Aerobic Phenylacetate-CoA Ligase; CapK Domain Protein; CoA Ligase; Two-Component Fusion Protein; Polysaccharide Biosynthesis Protein; Indoleacetate-Lysine Ligase; Co A Ligase; CoA Ligase Involved In Capsular Antigen Synthesis; Phenylacetate-Coa Ligase

Number of amino acids: Translated: 480; Mature: 479

Protein sequence:

>480_residues
MTAQHPAPPFDTWLWMQAWSETWCAGLDPAGAGQRLRAQRLARLIDATLSGSPFYRRRHPGAHELADFRPVSKAELMAHF
DDWATDRRITRAAAQAFVADPACIADGWLGNYLLWTSSGTSGEPGVFVQDARSLAAYDAIDALRLRGAGPGQVSLGSWGA
RQRFAFVGATGGHFAGVVSMERLRRLVPAALAPEIRVLSVLEPLCDVAQALQAQQPSVLITYPSCAAALARLQEAGQLRL
ALKEVWTGGEQLSAEQRQQIQAAFGCPVRNNYGASEFFTIAWECAHGELHLNDDWLVLEPVDERLRPLPVGEMSHSTLLT
NLANLTQPLLRYQLGDRVRRVAERCSCGSAFPLIEVQGRADDTLRLRDAQHRPVTILPLALETAIEEGAHVTQFQALCGS
DGDSIELRFEASVGDARAAFTQSRRALADFLAHHGVSGTRISMSAAEPLRQRASGKLRRVVMLPAAPVRRKPPARAPARR

Sequences:

>Translated_480_residues
MTAQHPAPPFDTWLWMQAWSETWCAGLDPAGAGQRLRAQRLARLIDATLSGSPFYRRRHPGAHELADFRPVSKAELMAHF
DDWATDRRITRAAAQAFVADPACIADGWLGNYLLWTSSGTSGEPGVFVQDARSLAAYDAIDALRLRGAGPGQVSLGSWGA
RQRFAFVGATGGHFAGVVSMERLRRLVPAALAPEIRVLSVLEPLCDVAQALQAQQPSVLITYPSCAAALARLQEAGQLRL
ALKEVWTGGEQLSAEQRQQIQAAFGCPVRNNYGASEFFTIAWECAHGELHLNDDWLVLEPVDERLRPLPVGEMSHSTLLT
NLANLTQPLLRYQLGDRVRRVAERCSCGSAFPLIEVQGRADDTLRLRDAQHRPVTILPLALETAIEEGAHVTQFQALCGS
DGDSIELRFEASVGDARAAFTQSRRALADFLAHHGVSGTRISMSAAEPLRQRASGKLRRVVMLPAAPVRRKPPARAPARR
>Mature_479_residues
TAQHPAPPFDTWLWMQAWSETWCAGLDPAGAGQRLRAQRLARLIDATLSGSPFYRRRHPGAHELADFRPVSKAELMAHFD
DWATDRRITRAAAQAFVADPACIADGWLGNYLLWTSSGTSGEPGVFVQDARSLAAYDAIDALRLRGAGPGQVSLGSWGAR
QRFAFVGATGGHFAGVVSMERLRRLVPAALAPEIRVLSVLEPLCDVAQALQAQQPSVLITYPSCAAALARLQEAGQLRLA
LKEVWTGGEQLSAEQRQQIQAAFGCPVRNNYGASEFFTIAWECAHGELHLNDDWLVLEPVDERLRPLPVGEMSHSTLLTN
LANLTQPLLRYQLGDRVRRVAERCSCGSAFPLIEVQGRADDTLRLRDAQHRPVTILPLALETAIEEGAHVTQFQALCGSD
GDSIELRFEASVGDARAAFTQSRRALADFLAHHGVSGTRISMSAAEPLRQRASGKLRRVVMLPAAPVRRKPPARAPARR

Specific function: Unknown

COG id: COG1541

COG function: function code H; Coenzyme F390 synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52431; Mature: 52300

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAQHPAPPFDTWLWMQAWSETWCAGLDPAGAGQRLRAQRLARLIDATLSGSPFYRRRHP
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCC
GAHELADFRPVSKAELMAHFDDWATDRRITRAAAQAFVADPACIADGWLGNYLLWTSSGT
CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECCCC
SGEPGVFVQDARSLAAYDAIDALRLRGAGPGQVSLGSWGARQRFAFVGATGGHFAGVVSM
CCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEEEEECCCCHHHHHHHH
ERLRRLVPAALAPEIRVLSVLEPLCDVAQALQAQQPSVLITYPSCAAALARLQEAGQLRL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCHHHH
ALKEVWTGGEQLSAEQRQQIQAAFGCPVRNNYGASEFFTIAWECAHGELHLNDDWLVLEP
HHHHHHCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCEEEECCCEEEECC
VDERLRPLPVGEMSHSTLLTNLANLTQPLLRYQLGDRVRRVAERCSCGSAFPLIEVQGRA
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC
DDTLRLRDAQHRPVTILPLALETAIEEGAHVTQFQALCGSDGDSIELRFEASVGDARAAF
CCEEEECCCCCCCEEEEHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHH
TQSRRALADFLAHHGVSGTRISMSAAEPLRQRASGKLRRVVMLPAAPVRRKPPARAPARR
HHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TAQHPAPPFDTWLWMQAWSETWCAGLDPAGAGQRLRAQRLARLIDATLSGSPFYRRRHP
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCC
GAHELADFRPVSKAELMAHFDDWATDRRITRAAAQAFVADPACIADGWLGNYLLWTSSGT
CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECCCC
SGEPGVFVQDARSLAAYDAIDALRLRGAGPGQVSLGSWGARQRFAFVGATGGHFAGVVSM
CCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEEEEECCCCHHHHHHHH
ERLRRLVPAALAPEIRVLSVLEPLCDVAQALQAQQPSVLITYPSCAAALARLQEAGQLRL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCHHHH
ALKEVWTGGEQLSAEQRQQIQAAFGCPVRNNYGASEFFTIAWECAHGELHLNDDWLVLEP
HHHHHHCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCEEEECCCEEEECC
VDERLRPLPVGEMSHSTLLTNLANLTQPLLRYQLGDRVRRVAERCSCGSAFPLIEVQGRA
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC
DDTLRLRDAQHRPVTILPLALETAIEEGAHVTQFQALCGSDGDSIELRFEASVGDARAAF
CCEEEECCCCCCCEEEEHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHH
TQSRRALADFLAHHGVSGTRISMSAAEPLRQRASGKLRRVVMLPAAPVRRKPPARAPARR
HHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA