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The map label for this gene is 124027828

Identifier: 124027828

GI number: 124027828

Start: 963900

End: 964448

Strand: Reverse

Name: 124027828

Synonym: Hbut_0955

Alternate gene names: NA

Gene position: 964448-963900 (Counterclockwise)

Preceding gene: 124027830

Following gene: 124027827

Centisome position: 57.85

GC content: 48.82

Gene sequence:

>549_bases
TTGCACAGAGGAGAGAAAAAGATCGCTATAGTAGTGGAGGAGGGCGTAGAACTACTGCAGCGATACTTACCCAAGCGAGC
CACTCCCAGCGAAGTCGAGCCTGTTGAAGCACTATACCTGCTCTATACCGAAGCTGCACGGTTATACGATGAGCAGGGTC
GCATGCTAAATTTCGAGCAGCTTATGCGCATGCTAACAATACTCAACCCTTACGCATGGGTAGAGTTTGAAGTATATCTT
GACCTTCGAAGGAGGGGGCGAATACCTGTACCCGGCCCTCGAAGCCACACATTCCTCCTAAGGAGGAGCAAGAGAGACAC
GAAATATACGCATTACATCCTCGTACTAGAAGAGAATAGGCCTGTAAGCCTATCACTCATAAACTCGTTTGTAGAAGAAG
CACTTAAAAACAACTGGGAACCAATCCTAGCCATAGTCGATAGATACGGCGACATAACGTACTATAGTGTGACGCTTTTC
CACCCACAACCAGCGAGGACGATGCAGCATGCCGGCGAGAATACCTCTCGAACCACTCAGGGGATTTAG

Upstream 100 bases:

>100_bases
GCCAAGCATAGAACATCTTAAACCTCACTAGCTAGAACACGGTAAACTACAGGGGGTACAGCTACATGGGGGGAAAACCA
ACGAGACCATAGTGCTTAGG

Downstream 100 bases:

>100_bases
AGACATACTAGAACCAGACTCTAAAGCACTAACACTACTTGCGCAAAAATTTGCAAAACTAGCAGAACTCCACGGCTACG
AGGAAGTCATTCCACCAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MHRGEKKIAIVVEEGVELLQRYLPKRATPSEVEPVEALYLLYTEAARLYDEQGRMLNFEQLMRMLTILNPYAWVEFEVYL
DLRRRGRIPVPGPRSHTFLLRRSKRDTKYTHYILVLEENRPVSLSLINSFVEEALKNNWEPILAIVDRYGDITYYSVTLF
HPQPARTMQHAGENTSRTTQGI

Sequences:

>Translated_182_residues
MHRGEKKIAIVVEEGVELLQRYLPKRATPSEVEPVEALYLLYTEAARLYDEQGRMLNFEQLMRMLTILNPYAWVEFEVYL
DLRRRGRIPVPGPRSHTFLLRRSKRDTKYTHYILVLEENRPVSLSLINSFVEEALKNNWEPILAIVDRYGDITYYSVTLF
HPQPARTMQHAGENTSRTTQGI
>Mature_182_residues
MHRGEKKIAIVVEEGVELLQRYLPKRATPSEVEPVEALYLLYTEAARLYDEQGRMLNFEQLMRMLTILNPYAWVEFEVYL
DLRRRGRIPVPGPRSHTFLLRRSKRDTKYTHYILVLEENRPVSLSLINSFVEEALKNNWEPILAIVDRYGDITYYSVTLF
HPQPARTMQHAGENTSRTTQGI

Specific function: Unknown

COG id: COG1676

COG function: function code J; tRNA splicing endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21366; Mature: 21366

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRGEKKIAIVVEEGVELLQRYLPKRATPSEVEPVEALYLLYTEAARLYDEQGRMLNFEQ
CCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECHHH
LMRMLTILNPYAWVEFEVYLDLRRRGRIPVPGPRSHTFLLRRSKRDTKYTHYILVLEENR
HHHHHHHHCCCCEEEEEEEEEHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCC
PVSLSLINSFVEEALKNNWEPILAIVDRYGDITYYSVTLFHPQPARTMQHAGENTSRTTQ
CCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHCCCCCCCCCC
GI
CC
>Mature Secondary Structure
MHRGEKKIAIVVEEGVELLQRYLPKRATPSEVEPVEALYLLYTEAARLYDEQGRMLNFEQ
CCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECHHH
LMRMLTILNPYAWVEFEVYLDLRRRGRIPVPGPRSHTFLLRRSKRDTKYTHYILVLEENR
HHHHHHHHCCCCEEEEEEEEEHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCC
PVSLSLINSFVEEALKNNWEPILAIVDRYGDITYYSVTLFHPQPARTMQHAGENTSRTTQ
CCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHCCCCCCCCCC
GI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA