| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is 124027811
Identifier: 124027811
GI number: 124027811
Start: 945372
End: 945794
Strand: Reverse
Name: 124027811
Synonym: Hbut_0938
Alternate gene names: NA
Gene position: 945794-945372 (Counterclockwise)
Preceding gene: 124027812
Following gene: 124027810
Centisome position: 56.73
GC content: 47.28
Gene sequence:
>423_bases ATGAGCTTTGTACTGGAACCAAGCTATGCCATAAGCTACCTCTTCCGCCGAATACTTGTACCCGTAGATGGCTCAGAATC AAGCATGAGAGCTTTAGAAGTGGCACTTGACTTCGCACGGCGCTACGGATCAAAAGTCTCAGTACTCCATGTTCACGCAC CGGGAGCAGATACTAAGGCGATTAGGGAAGCCATAGAGAAGAGGGTAAGGGACAAGGGCGTTGCAGTGGACATAAAGTTT AAGGAGTATAACCCACAGACAAGCAGTGTCGCAAATGAGATAATATCAGAAATCATCGAAGGAGGCTACGACCTAGTAGT CCTTGGCGCCCGCGGAAACACAGCAAACGAGGATCTAATGATTGGGAGTGTAGCCCTATCTATAACCATAAACTCGGCAA CATCAGTCATGATCATAAGATGA
Upstream 100 bases:
>100_bases GGGCTATAACTTATTACCATACACCCAGACAAGAAAGCAATAAGATAATATGGATGGTCAGCAAACTAGCAAACCCGCAT AGCAGAAGGGTGTACATGAC
Downstream 100 bases:
>100_bases TGCTTCTACAATCTTACAACACTACACAGTCTTTTTACCACTATCACCTGTCTCAGCTATGCTACAAAACCCATAGTATA AGCGATATACCGACCCCACA
Product: stress protein
Products: NA
Alternate protein names: UspA Domain Protein; Stress Protein
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MSFVLEPSYAISYLFRRILVPVDGSESSMRALEVALDFARRYGSKVSVLHVHAPGADTKAIREAIEKRVRDKGVAVDIKF KEYNPQTSSVANEIISEIIEGGYDLVVLGARGNTANEDLMIGSVALSITINSATSVMIIR
Sequences:
>Translated_140_residues MSFVLEPSYAISYLFRRILVPVDGSESSMRALEVALDFARRYGSKVSVLHVHAPGADTKAIREAIEKRVRDKGVAVDIKF KEYNPQTSSVANEIISEIIEGGYDLVVLGARGNTANEDLMIGSVALSITINSATSVMIIR >Mature_139_residues SFVLEPSYAISYLFRRILVPVDGSESSMRALEVALDFARRYGSKVSVLHVHAPGADTKAIREAIEKRVRDKGVAVDIKFK EYNPQTSSVANEIISEIIEGGYDLVVLGARGNTANEDLMIGSVALSITINSATSVMIIR
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15260; Mature: 15129
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFVLEPSYAISYLFRRILVPVDGSESSMRALEVALDFARRYGSKVSVLHVHAPGADTKA CCEEECCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHH IREAIEKRVRDKGVAVDIKFKEYNPQTSSVANEIISEIIEGGYDLVVLGARGNTANEDLM HHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEE IGSVALSITINSATSVMIIR EEEEEEEEEECCCCEEEEEC >Mature Secondary Structure SFVLEPSYAISYLFRRILVPVDGSESSMRALEVALDFARRYGSKVSVLHVHAPGADTKA CEEECCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHH IREAIEKRVRDKGVAVDIKFKEYNPQTSSVANEIISEIIEGGYDLVVLGARGNTANEDLM HHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEE IGSVALSITINSATSVMIIR EEEEEEEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA