| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025747
Identifier: 124025747
GI number: 124025747
Start: 958451
End: 958798
Strand: Direct
Name: 124025747
Synonym: NATL1_10401
Alternate gene names: NA
Gene position: 958451-958798 (Clockwise)
Preceding gene: 124025745
Following gene: 124025748
Centisome position: 51.4
GC content: 33.05
Gene sequence:
>348_bases ATGGGTAAAACTAATTCAAATTCTAAAATAGAAGAGGTTGATTCAAAGGATTCTAATCCTTTTTTTAGCATATTAATTAC ATCTTTTAGTACAATTTTTTTAGCTGAGTTAGGAGACAAGACCCAACTTGCAACATTAATTATTTCTGCACAGTCTGGTA GACCGCTAATTGTTTTCATTGGTGCTTCACTAGCACTTATTTCTACCAGCCTTTTAGGAGTCCTAATAGGTAGATGGATA GCTAATAACCTGCCAAGGCAGAAGTTTACAGTGGTTTCGGGAATAGTTATGTTAAGTTTAGGAATATACCTAGTAACACA AGGTTTTATTGGTTTTATACAAAATTAG
Upstream 100 bases:
>100_bases GAAATCAGGTATTTTCAATTTTAACTTGTTCATCTATAGTATATAAAATATATATTCTTTGTATATACATAAAAAGGAGA AAATCTCTTAATTGGAATTA
Downstream 100 bases:
>100_bases AAATTGAACTAATTTAATGATTCTTACGCTTCTCTTTACAACATTTGTTACTGTATTTCTTGCTGAAATGGGCGACAAAA CTCAATTAACAACCATAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MGKTNSNSKIEEVDSKDSNPFFSILITSFSTIFLAELGDKTQLATLIISAQSGRPLIVFIGASLALISTSLLGVLIGRWI ANNLPRQKFTVVSGIVMLSLGIYLVTQGFIGFIQN
Sequences:
>Translated_115_residues MGKTNSNSKIEEVDSKDSNPFFSILITSFSTIFLAELGDKTQLATLIISAQSGRPLIVFIGASLALISTSLLGVLIGRWI ANNLPRQKFTVVSGIVMLSLGIYLVTQGFIGFIQN >Mature_114_residues GKTNSNSKIEEVDSKDSNPFFSILITSFSTIFLAELGDKTQLATLIISAQSGRPLIVFIGASLALISTSLLGVLIGRWIA NNLPRQKFTVVSGIVMLSLGIYLVTQGFIGFIQN
Specific function: Unknown
COG id: COG2119
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12380; Mature: 12248
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKTNSNSKIEEVDSKDSNPFFSILITSFSTIFLAELGDKTQLATLIISAQSGRPLIVFI CCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEE GASLALISTSLLGVLIGRWIANNLPRQKFTVVSGIVMLSLGIYLVTQGFIGFIQN CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GKTNSNSKIEEVDSKDSNPFFSILITSFSTIFLAELGDKTQLATLIISAQSGRPLIVFI CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEE GASLALISTSLLGVLIGRWIANNLPRQKFTVVSGIVMLSLGIYLVTQGFIGFIQN CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA