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The map label for this gene is recJ [H]

Identifier: 124025745

GI number: 124025745

Start: 956195

End: 958084

Strand: Direct

Name: recJ [H]

Synonym: NATL1_10381

Alternate gene names: 124025745

Gene position: 956195-958084 (Clockwise)

Preceding gene: 124025742

Following gene: 124025747

Centisome position: 51.28

GC content: 31.16

Gene sequence:

>1890_bases
TTGGAAACAGATAAAGACCTTGTGAATCGATGGATATTACCTAAGCCAATAAATGAAGATGATATAACTAATATAAATTT
AAATCACACTCTTCAAGCCGTCTTAATTAGGAGAGGGATCGATCTAAATAATGAATTTGATGAATATATAACACCATCAG
ACCTACCAAATCCTGAAGAACATTTCGATGAATTATCTAAAGCGACTCAAAGAATAATTAATGCTTGCTTAAAAAAAGAA
AAGATTGCAATATGTGGTGATTACGACGCGGATGGTATAACAAGTACTGTGCTTTTAGTCGAATTATTGTCAATACTTGG
AGCAATAGTTAAGCCGTTTATACCTTCAAGACAGGATGAGGGTTATGGCCTTAATGAAAACATGATAAATAATATAAATA
ATCAAGGAATTAAGCTTGTAATTACTGTGGATAATGGCATATCTGCATTTGCCGCAATCAAGAAATCTGTTGATCTTGGG
ATCGATTTAATTATCACAGATCACCATAAAATACCTGATAAGAAATTAAATATTTTTTCGCTTATACATCCAGAAAAAAC
TCCTATTAATTCACCTTATAAATATTTGGCAGGTGTAGGTATTGCATACCTACTAGCAAAGAATATATGTGAGAAGATTG
ATTATGATATAAACAATTCTACGGCAAATATATTCTTTTGTATTGGCACTATTGCGGACATGGCTCCCCTTAAAGGTGCC
AATAGAAAATGGCTTAAAGAGTGTTTACCAAAAATAAATTCGACAACTAATAAAGGGATTAAATCTATAATGAAGAAGCT
ATCAATTCATAATGTTGATATAACATCAGATGATATTGGGTTTAAGATAGCGCCTTTAATAAATGCTGTCGGTAGAATTG
GTGACCCCAACCTTATCATTGATCTCTTTACAAATAAATCAAATGATTCAGTAGTTAAACTCACAAATGATTGTTTTAAT
ATGAATAGGGAAAGAAAAAGATTAACGTCCTTAGTTGAACAAGAAGCTCTAGAAATAGCAGTAAGTGAATATAGAAGTGA
TAGAAAATTTCTAGTATTAACTAAGAGAGAATGGCACCCTGGAATAATAGGAATAGTTGCGGCTAGAATAGCTGAAAAGT
TTAATTTACCAACTGCTTTACTTGCACAAGCAAATGATGGGAACTTCAGAGGATCTATAAGATCAAACAATAAATTAATG
GTCAACCAGGCCTTAGCTGAATGCGATGATCTTTTAATAGCGCATGGAGGCCACTCAGCCGCTGCAGGGTTTTCAATTAA
AAACGAAAATATTGATAAGCTTAGAGAAAAGCTAGATCAAATAGCTAACCGAGAATTTAAAGATATTAATTTATATAAGT
CAATAACTCCTGATGCATTTATTAGTTTTGATCAAATTAATTATAATTTTTATAGACAATTAACTTTGATAGGTCCATTT
GGAATAATGAATCCTACACCGATTTTCTGGGCAAGAAAGTGCAAAATCCTAGATATCTATAAACTAAAGGGTGATCACCT
AAAAATGACTCTTAATGACGGAACATCGACAATAGAAGCAATTAAATGGAATGGATCTACTGAATTAAAAAAACAAGATT
TAATTGATATCGCATTCTATATTGAAATAAATAGATGGAAAAAATTAAATACACTGCAATTAAATATTTTAGATATTAAA
CATCATAAAGATATAGTTAGTTTACAATTGCACAGTCGAATGTATAAATGCCAATTAATGGACACAAAGAATATATTAAT
CACTAACTCAAAAGGCCAGTCTTTTAGTTCAGACTTATCAATATCATCTGAGAATTTAAATGTAGATCAGAAAGTATTTG
CAAAAAAAATTCTTACTTTCGCAAAGATTGCACTAGGTAAGGCTGCTTAG

Upstream 100 bases:

>100_bases
TCCATCCACATCCCAAAAGACTGCTTTTAATTTATGCATGATTTTTCAGTATAAAACAAATATAATTCTGATTAATAATG
AATCAATCTAGGATAAGCTT

Downstream 100 bases:

>100_bases
CTTTAAACACCTCTTCTATAGAAGATCAAAGCAATTATCGCTGGTCCTGCTAGAAAGACTGCTACTAAAGGCAATAGGTT
TCCCATGATTTTTAGAAATT

Product: DHH domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 629; Mature: 629

Protein sequence:

>629_residues
METDKDLVNRWILPKPINEDDITNINLNHTLQAVLIRRGIDLNNEFDEYITPSDLPNPEEHFDELSKATQRIINACLKKE
KIAICGDYDADGITSTVLLVELLSILGAIVKPFIPSRQDEGYGLNENMINNINNQGIKLVITVDNGISAFAAIKKSVDLG
IDLIITDHHKIPDKKLNIFSLIHPEKTPINSPYKYLAGVGIAYLLAKNICEKIDYDINNSTANIFFCIGTIADMAPLKGA
NRKWLKECLPKINSTTNKGIKSIMKKLSIHNVDITSDDIGFKIAPLINAVGRIGDPNLIIDLFTNKSNDSVVKLTNDCFN
MNRERKRLTSLVEQEALEIAVSEYRSDRKFLVLTKREWHPGIIGIVAARIAEKFNLPTALLAQANDGNFRGSIRSNNKLM
VNQALAECDDLLIAHGGHSAAAGFSIKNENIDKLREKLDQIANREFKDINLYKSITPDAFISFDQINYNFYRQLTLIGPF
GIMNPTPIFWARKCKILDIYKLKGDHLKMTLNDGTSTIEAIKWNGSTELKKQDLIDIAFYIEINRWKKLNTLQLNILDIK
HHKDIVSLQLHSRMYKCQLMDTKNILITNSKGQSFSSDLSISSENLNVDQKVFAKKILTFAKIALGKAA

Sequences:

>Translated_629_residues
METDKDLVNRWILPKPINEDDITNINLNHTLQAVLIRRGIDLNNEFDEYITPSDLPNPEEHFDELSKATQRIINACLKKE
KIAICGDYDADGITSTVLLVELLSILGAIVKPFIPSRQDEGYGLNENMINNINNQGIKLVITVDNGISAFAAIKKSVDLG
IDLIITDHHKIPDKKLNIFSLIHPEKTPINSPYKYLAGVGIAYLLAKNICEKIDYDINNSTANIFFCIGTIADMAPLKGA
NRKWLKECLPKINSTTNKGIKSIMKKLSIHNVDITSDDIGFKIAPLINAVGRIGDPNLIIDLFTNKSNDSVVKLTNDCFN
MNRERKRLTSLVEQEALEIAVSEYRSDRKFLVLTKREWHPGIIGIVAARIAEKFNLPTALLAQANDGNFRGSIRSNNKLM
VNQALAECDDLLIAHGGHSAAAGFSIKNENIDKLREKLDQIANREFKDINLYKSITPDAFISFDQINYNFYRQLTLIGPF
GIMNPTPIFWARKCKILDIYKLKGDHLKMTLNDGTSTIEAIKWNGSTELKKQDLIDIAFYIEINRWKKLNTLQLNILDIK
HHKDIVSLQLHSRMYKCQLMDTKNILITNSKGQSFSSDLSISSENLNVDQKVFAKKILTFAKIALGKAA
>Mature_629_residues
METDKDLVNRWILPKPINEDDITNINLNHTLQAVLIRRGIDLNNEFDEYITPSDLPNPEEHFDELSKATQRIINACLKKE
KIAICGDYDADGITSTVLLVELLSILGAIVKPFIPSRQDEGYGLNENMINNINNQGIKLVITVDNGISAFAAIKKSVDLG
IDLIITDHHKIPDKKLNIFSLIHPEKTPINSPYKYLAGVGIAYLLAKNICEKIDYDINNSTANIFFCIGTIADMAPLKGA
NRKWLKECLPKINSTTNKGIKSIMKKLSIHNVDITSDDIGFKIAPLINAVGRIGDPNLIIDLFTNKSNDSVVKLTNDCFN
MNRERKRLTSLVEQEALEIAVSEYRSDRKFLVLTKREWHPGIIGIVAARIAEKFNLPTALLAQANDGNFRGSIRSNNKLM
VNQALAECDDLLIAHGGHSAAAGFSIKNENIDKLREKLDQIANREFKDINLYKSITPDAFISFDQINYNFYRQLTLIGPF
GIMNPTPIFWARKCKILDIYKLKGDHLKMTLNDGTSTIEAIKWNGSTELKKQDLIDIAFYIEINRWKKLNTLQLNILDIK
HHKDIVSLQLHSRMYKCQLMDTKNILITNSKGQSFSSDLSISSENLNVDQKVFAKKILTFAKIALGKAA

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=523, Percent_Identity=28.6806883365201, Blast_Score=222, Evalue=5e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 70763; Mature: 70763

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METDKDLVNRWILPKPINEDDITNINLNHTLQAVLIRRGIDLNNEFDEYITPSDLPNPEE
CCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHH
HFDELSKATQRIINACLKKEKIAICGDYDADGITSTVLLVELLSILGAIVKPFIPSRQDE
HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GYGLNENMINNINNQGIKLVITVDNGISAFAAIKKSVDLGIDLIITDHHKIPDKKLNIFS
CCCCCHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEE
LIHPEKTPINSPYKYLAGVGIAYLLAKNICEKIDYDINNSTANIFFCIGTIADMAPLKGA
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHCCCCC
NRKWLKECLPKINSTTNKGIKSIMKKLSIHNVDITSDDIGFKIAPLINAVGRIGDPNLII
CHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEECCCCCCEEHHHHHHHHHCCCCCCEEE
DLFTNKSNDSVVKLTNDCFNMNRERKRLTSLVEQEALEIAVSEYRSDRKFLVLTKREWHP
EEEECCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
GIIGIVAARIAEKFNLPTALLAQANDGNFRGSIRSNNKLMVNQALAECDDLLIAHGGHSA
CHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCEEEHHHHHHHHHHEEEECCCCCC
AAGFSIKNENIDKLREKLDQIANREFKDINLYKSITPDAFISFDQINYNFYRQLTLIGPF
CCCCEECCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEEEECCCCEEEEEEEEECCC
GIMNPTPIFWARKCKILDIYKLKGDHLKMTLNDGTSTIEAIKWNGSTELKKQDLIDIAFY
CCCCCCCCEEECCEEEEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCCHHCCEEEEEE
IEINRWKKLNTLQLNILDIKHHKDIVSLQLHSRMYKCQLMDTKNILITNSKGQSFSSDLS
EEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHEEEEEEECCCCEEEECCCCCCCCCCCE
ISSENLNVDQKVFAKKILTFAKIALGKAA
ECCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
METDKDLVNRWILPKPINEDDITNINLNHTLQAVLIRRGIDLNNEFDEYITPSDLPNPEE
CCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHH
HFDELSKATQRIINACLKKEKIAICGDYDADGITSTVLLVELLSILGAIVKPFIPSRQDE
HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GYGLNENMINNINNQGIKLVITVDNGISAFAAIKKSVDLGIDLIITDHHKIPDKKLNIFS
CCCCCHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEE
LIHPEKTPINSPYKYLAGVGIAYLLAKNICEKIDYDINNSTANIFFCIGTIADMAPLKGA
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHCCCCC
NRKWLKECLPKINSTTNKGIKSIMKKLSIHNVDITSDDIGFKIAPLINAVGRIGDPNLII
CHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEECCCCCCEEHHHHHHHHHCCCCCCEEE
DLFTNKSNDSVVKLTNDCFNMNRERKRLTSLVEQEALEIAVSEYRSDRKFLVLTKREWHP
EEEECCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
GIIGIVAARIAEKFNLPTALLAQANDGNFRGSIRSNNKLMVNQALAECDDLLIAHGGHSA
CHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCEEEHHHHHHHHHHEEEECCCCCC
AAGFSIKNENIDKLREKLDQIANREFKDINLYKSITPDAFISFDQINYNFYRQLTLIGPF
CCCCEECCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEEEECCCCEEEEEEEEECCC
GIMNPTPIFWARKCKILDIYKLKGDHLKMTLNDGTSTIEAIKWNGSTELKKQDLIDIAFY
CCCCCCCCEEECCEEEEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCCHHCCEEEEEE
IEINRWKKLNTLQLNILDIKHHKDIVSLQLHSRMYKCQLMDTKNILITNSKGQSFSSDLS
EEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHEEEEEEECCCCEEEECCCCCCCCCCCE
ISSENLNVDQKVFAKKILTFAKIALGKAA
ECCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]