| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is metG [H]
Identifier: 124025722
GI number: 124025722
Start: 941338
End: 942888
Strand: Direct
Name: metG [H]
Synonym: NATL1_10151
Alternate gene names: 124025722
Gene position: 941338-942888 (Clockwise)
Preceding gene: 124025721
Following gene: 124025723
Centisome position: 50.48
GC content: 32.3
Gene sequence:
>1551_bases ATGAATATGAAATACACAATTACAACACCACTATATTATGTTAACGACAAGCCTCATCTAGGTAGTTCATATACAACAAT CGCTTGTGATGCAATAGCTCGTTTTGAAAGACTAAATGGAAATACTGTCCTTTTTCTTACTGGTGTTGACGAACATGGTC AGAAAATAGAACGTACTGCAGAAAGCAAAAACCTTGAACCTCAACTACATTGCGATGAAATCACGGAAAAGTATAAGTAT TTATGGGATAAACTAAATATTAGTTACGATCGTTTCGTTAGAACAACTTCTATTGAACATACATCTTTGGTCCATCAATT TTATTCCAAAGTTTTGAAATCTGATGATGTATACATGGGTAGGCAAAGTGGTTGGTATTGTGTTGGATGTGAGGAATATA AGGATGTTGAGGATAAAGATAAAAGTCCAATCTGCTCAATACATAAAAAGGAATTAGAGTGGAGAGATGAAGAGAATTTA TTTTTTAAATTATCAAAATATCAAGATCAAATTGAAAAATTAATTAATGTCGATGGTTTCATATCTCCAAAAAGTAGAAA AAATGAAATTATAAATTTTGTCTCCAAGGGCTTAAGAGATTTCTCAATTTCAAGAGTAAACTTAAAATGGGGAATAAAAG TTCCAGGAAATAAGGATCATACATTTTATGTATGGTTTGACGCTTTACTTGGTTATGTTAGTGGATCTCTTAATGATCAA TGCTCACCGGAACTAACTGAAAAATCGTTATGTAATTGGCCTGCAAACAGACATGTTATTGGTAAGGATATCCTCAGATT CCACGCTGTTTATTGGCCTGCAATGCTTCTGTCCGCAGGTATGAAAACACCACGAAGTGTTTTTGGTCATGGGTTCTTAA CACGAGAAGGGCAGAAAATGGGTAAATCACTAGGTAACGTACTTGACCCTATTGAACTTCTGGAATATGGCGGGATCGAT GCAATGAGATGGTATCTTCTAAGAGATATTGAATTTGGAGAAGATGGTGATTTTCAAATGAGAAGATTTGTTGATATCGT TAATAGTGATTTATGTAATACTATTGGTAATTTATTAAATAGAACAATAACAATGTCGAAAAAATGGTTTAAAGAAAATA TACCAATTGATAATACTGCATCATCTGACTCTACACTTAAAGTTCAATCAGAGACAAAGATAATCGAATATATGGAGTCA TTTAAGGATAGTAATTTTAAAAGCTCAGCTAATGCAATAATTGATTTAGCCAATAGTGCAAATCTTTATCTAAATGATCG AGCACCATGGAAACTAATTAAGGATATTTCAAATAAAAATGTTGTAGCCCTTGATATTTATTCTGTTCTCGAATCATGCC GGATTATTGGAATATTACTTAATCCGATCGTACCAAATTTAAGTACTAGAATATTAAAACAACTTAATATTGACACTTCA AATATAAATTTTAAAGATTCACTGCAATGGGGTTTATTAGATCCTAATAATAGATTACAGGACCCGACTCCTGTAATGGA TAAGATTGAATTTAAAGAGGACCCTAAATAG
Upstream 100 bases:
>100_bases AACGATATGAATTATTTTGAGATAATTCAATGATTAATATTAACTATAAACATAGAAGTGCAAAAGCCTTAAAAATATAA TATAATAAACAGAATATGTA
Downstream 100 bases:
>100_bases TGAACTCGTTCAATATCTATTTACTATTTATACTTACTATATTTCCACTTTTAGGATGTCAGAAATCTAATAAATCTACT GCACAGATTGATAACAAAAG
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MNMKYTITTPLYYVNDKPHLGSSYTTIACDAIARFERLNGNTVLFLTGVDEHGQKIERTAESKNLEPQLHCDEITEKYKY LWDKLNISYDRFVRTTSIEHTSLVHQFYSKVLKSDDVYMGRQSGWYCVGCEEYKDVEDKDKSPICSIHKKELEWRDEENL FFKLSKYQDQIEKLINVDGFISPKSRKNEIINFVSKGLRDFSISRVNLKWGIKVPGNKDHTFYVWFDALLGYVSGSLNDQ CSPELTEKSLCNWPANRHVIGKDILRFHAVYWPAMLLSAGMKTPRSVFGHGFLTREGQKMGKSLGNVLDPIELLEYGGID AMRWYLLRDIEFGEDGDFQMRRFVDIVNSDLCNTIGNLLNRTITMSKKWFKENIPIDNTASSDSTLKVQSETKIIEYMES FKDSNFKSSANAIIDLANSANLYLNDRAPWKLIKDISNKNVVALDIYSVLESCRIIGILLNPIVPNLSTRILKQLNIDTS NINFKDSLQWGLLDPNNRLQDPTPVMDKIEFKEDPK
Sequences:
>Translated_516_residues MNMKYTITTPLYYVNDKPHLGSSYTTIACDAIARFERLNGNTVLFLTGVDEHGQKIERTAESKNLEPQLHCDEITEKYKY LWDKLNISYDRFVRTTSIEHTSLVHQFYSKVLKSDDVYMGRQSGWYCVGCEEYKDVEDKDKSPICSIHKKELEWRDEENL FFKLSKYQDQIEKLINVDGFISPKSRKNEIINFVSKGLRDFSISRVNLKWGIKVPGNKDHTFYVWFDALLGYVSGSLNDQ CSPELTEKSLCNWPANRHVIGKDILRFHAVYWPAMLLSAGMKTPRSVFGHGFLTREGQKMGKSLGNVLDPIELLEYGGID AMRWYLLRDIEFGEDGDFQMRRFVDIVNSDLCNTIGNLLNRTITMSKKWFKENIPIDNTASSDSTLKVQSETKIIEYMES FKDSNFKSSANAIIDLANSANLYLNDRAPWKLIKDISNKNVVALDIYSVLESCRIIGILLNPIVPNLSTRILKQLNIDTS NINFKDSLQWGLLDPNNRLQDPTPVMDKIEFKEDPK >Mature_516_residues MNMKYTITTPLYYVNDKPHLGSSYTTIACDAIARFERLNGNTVLFLTGVDEHGQKIERTAESKNLEPQLHCDEITEKYKY LWDKLNISYDRFVRTTSIEHTSLVHQFYSKVLKSDDVYMGRQSGWYCVGCEEYKDVEDKDKSPICSIHKKELEWRDEENL FFKLSKYQDQIEKLINVDGFISPKSRKNEIINFVSKGLRDFSISRVNLKWGIKVPGNKDHTFYVWFDALLGYVSGSLNDQ CSPELTEKSLCNWPANRHVIGKDILRFHAVYWPAMLLSAGMKTPRSVFGHGFLTREGQKMGKSLGNVLDPIELLEYGGID AMRWYLLRDIEFGEDGDFQMRRFVDIVNSDLCNTIGNLLNRTITMSKKWFKENIPIDNTASSDSTLKVQSETKIIEYMES FKDSNFKSSANAIIDLANSANLYLNDRAPWKLIKDISNKNVVALDIYSVLESCRIIGILLNPIVPNLSTRILKQLNIDTS NINFKDSLQWGLLDPNNRLQDPTPVMDKIEFKEDPK
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2A subfamily [H]
Homologues:
Organism=Homo sapiens, GI24308436, Length=510, Percent_Identity=31.9607843137255, Blast_Score=276, Evalue=4e-74, Organism=Homo sapiens, GI14043022, Length=551, Percent_Identity=25.7713248638838, Blast_Score=152, Evalue=6e-37, Organism=Escherichia coli, GI1788432, Length=513, Percent_Identity=26.3157894736842, Blast_Score=173, Evalue=3e-44, Organism=Caenorhabditis elegans, GI212645096, Length=512, Percent_Identity=30.46875, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI71992781, Length=407, Percent_Identity=28.992628992629, Blast_Score=162, Evalue=3e-40, Organism=Caenorhabditis elegans, GI17540794, Length=556, Percent_Identity=25.3597122302158, Blast_Score=150, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6321610, Length=518, Percent_Identity=32.4324324324324, Blast_Score=254, Evalue=3e-68, Organism=Saccharomyces cerevisiae, GI6321704, Length=541, Percent_Identity=25.1386321626617, Blast_Score=108, Evalue=2e-24, Organism=Drosophila melanogaster, GI21358483, Length=502, Percent_Identity=32.2709163346614, Blast_Score=277, Evalue=2e-74, Organism=Drosophila melanogaster, GI24655311, Length=550, Percent_Identity=26.5454545454545, Blast_Score=177, Evalue=1e-44,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015413 - InterPro: IPR014758 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 [H]
Pfam domain/function: PF08264 Anticodon_1; PF09334 tRNA-synt_1g [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 59458; Mature: 59458
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMKYTITTPLYYVNDKPHLGSSYTTIACDAIARFERLNGNTVLFLTGVDEHGQKIERTA CCCEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH ESKNLEPQLHCDEITEKYKYLWDKLNISYDRFVRTTSIEHTSLVHQFYSKVLKSDDVYMG HHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHEECCCCHHHHHHHHHHHHHHCCCCEEEC RQSGWYCVGCEEYKDVEDKDKSPICSIHKKELEWRDEENLFFKLSKYQDQIEKLINVDGF CCCCEEEECCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHCCCCC ISPKSRKNEIINFVSKGLRDFSISRVNLKWGIKVPGNKDHTFYVWFDALLGYVSGSLNDQ CCCCHHHHHHHHHHHHCCHHCCEEEEEEEEEEECCCCCCCEEEEEHHHHHHHHCCCCCCC CSPELTEKSLCNWPANRHVIGKDILRFHAVYWPAMLLSAGMKTPRSVFGHGFLTREGQKM CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHH GKSLGNVLDPIELLEYGGIDAMRWYLLRDIEFGEDGDFQMRRFVDIVNSDLCNTIGNLLN HHHHHHHHCHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RTITMSKKWFKENIPIDNTASSDSTLKVQSETKIIEYMESFKDSNFKSSANAIIDLANSA HHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC NLYLNDRAPWKLIKDISNKNVVALDIYSVLESCRIIGILLNPIVPNLSTRILKQLNIDTS EEEECCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC NINFKDSLQWGLLDPNNRLQDPTPVMDKIEFKEDPK CCCCCCCCEECCCCCCCCCCCCCCHHHHCCCCCCCC >Mature Secondary Structure MNMKYTITTPLYYVNDKPHLGSSYTTIACDAIARFERLNGNTVLFLTGVDEHGQKIERTA CCCEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH ESKNLEPQLHCDEITEKYKYLWDKLNISYDRFVRTTSIEHTSLVHQFYSKVLKSDDVYMG HHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHEECCCCHHHHHHHHHHHHHHCCCCEEEC RQSGWYCVGCEEYKDVEDKDKSPICSIHKKELEWRDEENLFFKLSKYQDQIEKLINVDGF CCCCEEEECCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHCCCCC ISPKSRKNEIINFVSKGLRDFSISRVNLKWGIKVPGNKDHTFYVWFDALLGYVSGSLNDQ CCCCHHHHHHHHHHHHCCHHCCEEEEEEEEEEECCCCCCCEEEEEHHHHHHHHCCCCCCC CSPELTEKSLCNWPANRHVIGKDILRFHAVYWPAMLLSAGMKTPRSVFGHGFLTREGQKM CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHH GKSLGNVLDPIELLEYGGIDAMRWYLLRDIEFGEDGDFQMRRFVDIVNSDLCNTIGNLLN HHHHHHHHCHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RTITMSKKWFKENIPIDNTASSDSTLKVQSETKIIEYMESFKDSNFKSSANAIIDLANSA HHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC NLYLNDRAPWKLIKDISNKNVVALDIYSVLESCRIIGILLNPIVPNLSTRILKQLNIDTS EEEECCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC NINFKDSLQWGLLDPNNRLQDPTPVMDKIEFKEDPK CCCCCCCCEECCCCCCCCCCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]