| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025548
Identifier: 124025548
GI number: 124025548
Start: 772991
End: 773659
Strand: Reverse
Name: 124025548
Synonym: NATL1_08411
Alternate gene names: NA
Gene position: 773659-772991 (Counterclockwise)
Preceding gene: 124025549
Following gene: 124025547
Centisome position: 41.49
GC content: 35.87
Gene sequence:
>669_bases ATGAAATTAGCCATAACAGGAGCTTCGGGAAAAACAGGTTTTCGAGTAGCAGAGGAAGCTATATCAGCTGGATATGAAGT GAGATTGATAATTAGATCACAGTCTGAGATTCCTGAATCCATACAAGGTTGTGAAAGGTACGTTTTGTCAGACACTAATG GAACCACACTTGATTATGCATTACAAGGTTGTGACAGCCTAGTTATAGCAACAGGTGCGAGGCCATCTATCGATTTAACA GGTCCAGCAAAAGTAGATTATCTAAATATCAAAAAACAAATTGAAAGCTGTAAAAGACAAAAGTTAAATAGGGTTGTTCT TGTTAGTTCACTTTGCGCTGGGAAATTGATACACCCTCTAAATCTATTTGGTCTAATACTTATATGGAAAAGATTAGGCG AAAGATCTCTACAAAAAAGTGGGCTAGATTGGACTGTTATCCGTCCTGGAGGTCTGAATGAGAATGAAACTAATTTAAAA AATCAAAATATTTTGTTCTCTGGTGAAAAAACTCAAGAAGAAGGCTCGATTCCCAGAAGACTTGTTGCAAAAGCCTGTAT AGAAGCTTTAAAAACAAATGATTCTATAGAAAAAATCATCGAGATTACTAGTAGCGAAGAGAATCCCAAAACAAATATGA GTAAGGCAATAAAGGCGTTTAGTATTTGA
Upstream 100 bases:
>100_bases CAGTTATTTGTATAAAGGCTTAATAATTATCTATTAATTTTATTATCGCAACAAAAAGGACTATTTCTTGCTAGAAACAT ATTAAAGAAATTTAATTCTA
Downstream 100 bases:
>100_bases CTATAAAAACCTAAATTCACTATGAACACCAACGCTAAAATTGACGCGTTGCAGCTAATGCTTACTGATCTAAGAACACG GAACGAATCAATAAGACATA
Product: putative NADH-flavin reductase
Products: NA
Alternate protein names: NADH-Flavin Reductase; Nucleoside-Diphosphate-Sugar Epimerase; NAD Dependent Epimerase/Dehydratase; NmrA Family Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerases; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Nucleoside-Diphosphate-Sugar Epimerase-Like; NAD-Dependent Epimerase/Dehydratase Family Protein; NmrA-Like; NAD Dependent Epimerase/Dehydratase Family Protein
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MKLAITGASGKTGFRVAEEAISAGYEVRLIIRSQSEIPESIQGCERYVLSDTNGTTLDYALQGCDSLVIATGARPSIDLT GPAKVDYLNIKKQIESCKRQKLNRVVLVSSLCAGKLIHPLNLFGLILIWKRLGERSLQKSGLDWTVIRPGGLNENETNLK NQNILFSGEKTQEEGSIPRRLVAKACIEALKTNDSIEKIIEITSSEENPKTNMSKAIKAFSI
Sequences:
>Translated_222_residues MKLAITGASGKTGFRVAEEAISAGYEVRLIIRSQSEIPESIQGCERYVLSDTNGTTLDYALQGCDSLVIATGARPSIDLT GPAKVDYLNIKKQIESCKRQKLNRVVLVSSLCAGKLIHPLNLFGLILIWKRLGERSLQKSGLDWTVIRPGGLNENETNLK NQNILFSGEKTQEEGSIPRRLVAKACIEALKTNDSIEKIIEITSSEENPKTNMSKAIKAFSI >Mature_222_residues MKLAITGASGKTGFRVAEEAISAGYEVRLIIRSQSEIPESIQGCERYVLSDTNGTTLDYALQGCDSLVIATGARPSIDLT GPAKVDYLNIKKQIESCKRQKLNRVVLVSSLCAGKLIHPLNLFGLILIWKRLGERSLQKSGLDWTVIRPGGLNENETNLK NQNILFSGEKTQEEGSIPRRLVAKACIEALKTNDSIEKIIEITSSEENPKTNMSKAIKAFSI
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24334; Mature: 24334
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAITGASGKTGFRVAEEAISAGYEVRLIIRSQSEIPESIQGCERYVLSDTNGTTLDYA CEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHEEECCCCCCHHHH LQGCDSLVIATGARPSIDLTGPAKVDYLNIKKQIESCKRQKLNRVVLVSSLCAGKLIHPL HHCCCEEEEEECCCCCEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLFGLILIWKRLGERSLQKSGLDWTVIRPGGLNENETNLKNQNILFSGEKTQEEGSIPRR HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHH LVAKACIEALKTNDSIEKIIEITSSEENPKTNMSKAIKAFSI HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MKLAITGASGKTGFRVAEEAISAGYEVRLIIRSQSEIPESIQGCERYVLSDTNGTTLDYA CEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHEEECCCCCCHHHH LQGCDSLVIATGARPSIDLTGPAKVDYLNIKKQIESCKRQKLNRVVLVSSLCAGKLIHPL HHCCCEEEEEECCCCCEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLFGLILIWKRLGERSLQKSGLDWTVIRPGGLNENETNLKNQNILFSGEKTQEEGSIPRR HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHH LVAKACIEALKTNDSIEKIIEITSSEENPKTNMSKAIKAFSI HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA