| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025544
Identifier: 124025544
GI number: 124025544
Start: 769589
End: 770512
Strand: Direct
Name: 124025544
Synonym: NATL1_08371
Alternate gene names: NA
Gene position: 769589-770512 (Clockwise)
Preceding gene: 124025526
Following gene: 124025546
Centisome position: 41.27
GC content: 35.28
Gene sequence:
>924_bases ATGATCTTGAAAGTTCTTTTTTACGGTGGAACAAGGTTTGTAGGGAAAGCCCTTGTCTCGAACTTGTTATCAAAAGGACA TGAGATATTTGTTTTTACACGTGGAAATTTACCAGTACCAGAAAATATAACTCACCTAAAGGGAGACAGGTCAAATGATG AGGATCTAAAAAAACTATCTGATCATTCATTTGATCTGATTGTTGATAGCTCTGGACGAAAGTTGGCGGATACGCAAAGA CTTCTTAAATTTTCAGGTCTTCCTAGTTACAGATTTATCTACATAAGTTCTGCAGGCGTATATGACAACACACAATTATT TCCTGTTGGTGAAGATGGTCCAATAGATCTTGAAAGTCGTCATATAGGTAAAGCAAAAACAGAGTCTTGGCTCAAGGCTG AAGGTATTCCTTTTACGAGTTTTCGCCCGACATATATTTATGGCCCAGGCAACTACAACCCTATTGAAAAATGGTTTTTT GATCGTATAACTAATGGTCGATCTATTCCTGTTCCACTTGATGGTCAAGCGATCACGCAATTAGGACATGTTTCTGATTT GGCCGAGGCTATTGCGAAATCTCTTGAAACAGATAAAGCGAATAATCAAATTTATAACTGTTCAGGAAGAAAAGCAGTAA CTTTTAAAGGTTTAATTGACACGGCAATTTTAGCTACTGGAAACAAAGTCACTGATTTTGATTTGCGTTCTTTCGATCCA TCAAAACTTGATCCTAAAGCAAGAAAACTTTTCCCTCTACGGTTAATTAATTTCTTTACTGATACTTCTAAAATTGAAAA AGATTTATCTTGGGAGCCCAAATTCGATTTGTTAAATGGTTTAATTGATAGCTATAAGAATGATTATTTATTAGCTAATC ACGAACAAGTTGATTTTAGTTCTGATGAGCTTCTTTTTGATTGA
Upstream 100 bases:
>100_bases GTATGATTTCCATCAAGAAAAAAATTATTACTATTCATCTAACATCATTTATGTAGCTCTGGGAGATTATCTATAGGCTT TAATATAATTTTTTTAATAA
Downstream 100 bases:
>100_bases GTATATACTTGATAGCAGAACTTAAAGTAAGAAACAATGCTATCCAGAATGAGAAATAGCCTATTTTATTAATAATATTG ATTGTATAAATTGTACCCCA
Product: putative mRNA binding protein
Products: NA
Alternate protein names: Nucleotide Sugar Epimerase; DTDP-Glucose 4 6-Dehydratase; Nucleoside-Diphosphate-Sugar Epimerase; Isoflavone Reductase; NAD Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Reductase; NAD Dependent Epimerase/Dehydratase Family Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NADH Dehydrogenase; UDP-Glucose 4-Epimerase; Sugar Dehydratase; Dtdpglucose 4 6-Dehydratase-Like Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MILKVLFYGGTRFVGKALVSNLLSKGHEIFVFTRGNLPVPENITHLKGDRSNDEDLKKLSDHSFDLIVDSSGRKLADTQR LLKFSGLPSYRFIYISSAGVYDNTQLFPVGEDGPIDLESRHIGKAKTESWLKAEGIPFTSFRPTYIYGPGNYNPIEKWFF DRITNGRSIPVPLDGQAITQLGHVSDLAEAIAKSLETDKANNQIYNCSGRKAVTFKGLIDTAILATGNKVTDFDLRSFDP SKLDPKARKLFPLRLINFFTDTSKIEKDLSWEPKFDLLNGLIDSYKNDYLLANHEQVDFSSDELLFD
Sequences:
>Translated_307_residues MILKVLFYGGTRFVGKALVSNLLSKGHEIFVFTRGNLPVPENITHLKGDRSNDEDLKKLSDHSFDLIVDSSGRKLADTQR LLKFSGLPSYRFIYISSAGVYDNTQLFPVGEDGPIDLESRHIGKAKTESWLKAEGIPFTSFRPTYIYGPGNYNPIEKWFF DRITNGRSIPVPLDGQAITQLGHVSDLAEAIAKSLETDKANNQIYNCSGRKAVTFKGLIDTAILATGNKVTDFDLRSFDP SKLDPKARKLFPLRLINFFTDTSKIEKDLSWEPKFDLLNGLIDSYKNDYLLANHEQVDFSSDELLFD >Mature_307_residues MILKVLFYGGTRFVGKALVSNLLSKGHEIFVFTRGNLPVPENITHLKGDRSNDEDLKKLSDHSFDLIVDSSGRKLADTQR LLKFSGLPSYRFIYISSAGVYDNTQLFPVGEDGPIDLESRHIGKAKTESWLKAEGIPFTSFRPTYIYGPGNYNPIEKWFF DRITNGRSIPVPLDGQAITQLGHVSDLAEAIAKSLETDKANNQIYNCSGRKAVTFKGLIDTAILATGNKVTDFDLRSFDP SKLDPKARKLFPLRLINFFTDTSKIEKDLSWEPKFDLLNGLIDSYKNDYLLANHEQVDFSSDELLFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34541; Mature: 34541
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILKVLFYGGTRFVGKALVSNLLSKGHEIFVFTRGNLPVPENITHLKGDRSNDEDLKKLS CEEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHC DHSFDLIVDSSGRKLADTQRLLKFSGLPSYRFIYISSAGVYDNTQLFPVGEDGPIDLESR CCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCC HIGKAKTESWLKAEGIPFTSFRPTYIYGPGNYNPIEKWFFDRITNGRSIPVPLDGQAITQ CCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHH LGHVSDLAEAIAKSLETDKANNQIYNCSGRKAVTFKGLIDTAILATGNKVTDFDLRSFDP HHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEHHHHHHHHEECCCEEEECCCCCCCC SKLDPKARKLFPLRLINFFTDTSKIEKDLSWEPKFDLLNGLIDSYKNDYLLANHEQVDFS CCCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCC SDELLFD CCCEECC >Mature Secondary Structure MILKVLFYGGTRFVGKALVSNLLSKGHEIFVFTRGNLPVPENITHLKGDRSNDEDLKKLS CEEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHC DHSFDLIVDSSGRKLADTQRLLKFSGLPSYRFIYISSAGVYDNTQLFPVGEDGPIDLESR CCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCC HIGKAKTESWLKAEGIPFTSFRPTYIYGPGNYNPIEKWFFDRITNGRSIPVPLDGQAITQ CCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHH LGHVSDLAEAIAKSLETDKANNQIYNCSGRKAVTFKGLIDTAILATGNKVTDFDLRSFDP HHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEHHHHHHHHEECCCEEEECCCCCCCC SKLDPKARKLFPLRLINFFTDTSKIEKDLSWEPKFDLLNGLIDSYKNDYLLANHEQVDFS CCCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCC SDELLFD CCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA