Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124025544

Identifier: 124025544

GI number: 124025544

Start: 769589

End: 770512

Strand: Direct

Name: 124025544

Synonym: NATL1_08371

Alternate gene names: NA

Gene position: 769589-770512 (Clockwise)

Preceding gene: 124025526

Following gene: 124025546

Centisome position: 41.27

GC content: 35.28

Gene sequence:

>924_bases
ATGATCTTGAAAGTTCTTTTTTACGGTGGAACAAGGTTTGTAGGGAAAGCCCTTGTCTCGAACTTGTTATCAAAAGGACA
TGAGATATTTGTTTTTACACGTGGAAATTTACCAGTACCAGAAAATATAACTCACCTAAAGGGAGACAGGTCAAATGATG
AGGATCTAAAAAAACTATCTGATCATTCATTTGATCTGATTGTTGATAGCTCTGGACGAAAGTTGGCGGATACGCAAAGA
CTTCTTAAATTTTCAGGTCTTCCTAGTTACAGATTTATCTACATAAGTTCTGCAGGCGTATATGACAACACACAATTATT
TCCTGTTGGTGAAGATGGTCCAATAGATCTTGAAAGTCGTCATATAGGTAAAGCAAAAACAGAGTCTTGGCTCAAGGCTG
AAGGTATTCCTTTTACGAGTTTTCGCCCGACATATATTTATGGCCCAGGCAACTACAACCCTATTGAAAAATGGTTTTTT
GATCGTATAACTAATGGTCGATCTATTCCTGTTCCACTTGATGGTCAAGCGATCACGCAATTAGGACATGTTTCTGATTT
GGCCGAGGCTATTGCGAAATCTCTTGAAACAGATAAAGCGAATAATCAAATTTATAACTGTTCAGGAAGAAAAGCAGTAA
CTTTTAAAGGTTTAATTGACACGGCAATTTTAGCTACTGGAAACAAAGTCACTGATTTTGATTTGCGTTCTTTCGATCCA
TCAAAACTTGATCCTAAAGCAAGAAAACTTTTCCCTCTACGGTTAATTAATTTCTTTACTGATACTTCTAAAATTGAAAA
AGATTTATCTTGGGAGCCCAAATTCGATTTGTTAAATGGTTTAATTGATAGCTATAAGAATGATTATTTATTAGCTAATC
ACGAACAAGTTGATTTTAGTTCTGATGAGCTTCTTTTTGATTGA

Upstream 100 bases:

>100_bases
GTATGATTTCCATCAAGAAAAAAATTATTACTATTCATCTAACATCATTTATGTAGCTCTGGGAGATTATCTATAGGCTT
TAATATAATTTTTTTAATAA

Downstream 100 bases:

>100_bases
GTATATACTTGATAGCAGAACTTAAAGTAAGAAACAATGCTATCCAGAATGAGAAATAGCCTATTTTATTAATAATATTG
ATTGTATAAATTGTACCCCA

Product: putative mRNA binding protein

Products: NA

Alternate protein names: Nucleotide Sugar Epimerase; DTDP-Glucose 4 6-Dehydratase; Nucleoside-Diphosphate-Sugar Epimerase; Isoflavone Reductase; NAD Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Reductase; NAD Dependent Epimerase/Dehydratase Family Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NADH Dehydrogenase; UDP-Glucose 4-Epimerase; Sugar Dehydratase; Dtdpglucose 4 6-Dehydratase-Like Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MILKVLFYGGTRFVGKALVSNLLSKGHEIFVFTRGNLPVPENITHLKGDRSNDEDLKKLSDHSFDLIVDSSGRKLADTQR
LLKFSGLPSYRFIYISSAGVYDNTQLFPVGEDGPIDLESRHIGKAKTESWLKAEGIPFTSFRPTYIYGPGNYNPIEKWFF
DRITNGRSIPVPLDGQAITQLGHVSDLAEAIAKSLETDKANNQIYNCSGRKAVTFKGLIDTAILATGNKVTDFDLRSFDP
SKLDPKARKLFPLRLINFFTDTSKIEKDLSWEPKFDLLNGLIDSYKNDYLLANHEQVDFSSDELLFD

Sequences:

>Translated_307_residues
MILKVLFYGGTRFVGKALVSNLLSKGHEIFVFTRGNLPVPENITHLKGDRSNDEDLKKLSDHSFDLIVDSSGRKLADTQR
LLKFSGLPSYRFIYISSAGVYDNTQLFPVGEDGPIDLESRHIGKAKTESWLKAEGIPFTSFRPTYIYGPGNYNPIEKWFF
DRITNGRSIPVPLDGQAITQLGHVSDLAEAIAKSLETDKANNQIYNCSGRKAVTFKGLIDTAILATGNKVTDFDLRSFDP
SKLDPKARKLFPLRLINFFTDTSKIEKDLSWEPKFDLLNGLIDSYKNDYLLANHEQVDFSSDELLFD
>Mature_307_residues
MILKVLFYGGTRFVGKALVSNLLSKGHEIFVFTRGNLPVPENITHLKGDRSNDEDLKKLSDHSFDLIVDSSGRKLADTQR
LLKFSGLPSYRFIYISSAGVYDNTQLFPVGEDGPIDLESRHIGKAKTESWLKAEGIPFTSFRPTYIYGPGNYNPIEKWFF
DRITNGRSIPVPLDGQAITQLGHVSDLAEAIAKSLETDKANNQIYNCSGRKAVTFKGLIDTAILATGNKVTDFDLRSFDP
SKLDPKARKLFPLRLINFFTDTSKIEKDLSWEPKFDLLNGLIDSYKNDYLLANHEQVDFSSDELLFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34541; Mature: 34541

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKVLFYGGTRFVGKALVSNLLSKGHEIFVFTRGNLPVPENITHLKGDRSNDEDLKKLS
CEEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHC
DHSFDLIVDSSGRKLADTQRLLKFSGLPSYRFIYISSAGVYDNTQLFPVGEDGPIDLESR
CCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCC
HIGKAKTESWLKAEGIPFTSFRPTYIYGPGNYNPIEKWFFDRITNGRSIPVPLDGQAITQ
CCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHH
LGHVSDLAEAIAKSLETDKANNQIYNCSGRKAVTFKGLIDTAILATGNKVTDFDLRSFDP
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEHHHHHHHHEECCCEEEECCCCCCCC
SKLDPKARKLFPLRLINFFTDTSKIEKDLSWEPKFDLLNGLIDSYKNDYLLANHEQVDFS
CCCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCC
SDELLFD
CCCEECC
>Mature Secondary Structure
MILKVLFYGGTRFVGKALVSNLLSKGHEIFVFTRGNLPVPENITHLKGDRSNDEDLKKLS
CEEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHC
DHSFDLIVDSSGRKLADTQRLLKFSGLPSYRFIYISSAGVYDNTQLFPVGEDGPIDLESR
CCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCC
HIGKAKTESWLKAEGIPFTSFRPTYIYGPGNYNPIEKWFFDRITNGRSIPVPLDGQAITQ
CCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHH
LGHVSDLAEAIAKSLETDKANNQIYNCSGRKAVTFKGLIDTAILATGNKVTDFDLRSFDP
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEHHHHHHHHEECCCEEEECCCCCCCC
SKLDPKARKLFPLRLINFFTDTSKIEKDLSWEPKFDLLNGLIDSYKNDYLLANHEQVDFS
CCCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCC
SDELLFD
CCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA